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Lag0010591 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010591
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr1:1873058..1874318
RNA-Seq ExpressionLag0010591
SyntenyLag0010591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A438K6E3 LINE-1 retrotransposable element ORF2 protein7.5e-0448.57Show/hide
Query:  PFSLEEVRMVVFGFDRNKAPCSDGFPVAFLQGGKSEEGKGLPISLVKKLRKVLLSTI-SYEGAFIVGRQI
        PFS EEVRM VF  ++ KAP  DGF +A  Q       + L   L  +LRKVL  TI   +GAF+ GRQI
Subjt:  PFSLEEVRMVVFGFDRNKAPCSDGFPVAFLQGGKSEEGKGLPISLVKKLRKVLLSTI-SYEGAFIVGRQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGAGATGGGCCCTTTGTGCCACTAGCGATCCAAACTCGAGTTGGCTGACTTACTCCAGGGCGAGAATTGAGGGGTTAAAGGAGGAGTGTGTCATGTTGAA
GCCAAAGGGTGAGTATGAAGAGATGATTGTGATAGAAGGGAGTTGGGTTACCCCTTTTTCCCTCGAAGAGGTCCGTATGGTGGTTTTTGGGTTTGATAGGAATAAGGCCC
CATGTTCAGATGGTTTCCCCGTAGCTTTTCTCCAAGGAGGAAAGAGTGAGGAGGGTAAAGGATTGCCCATTAGTTTGGTTAAGAAGTTGAGGAAGGTTCTCCTATCCACG
ATCTCTTATGAAGGAGCCTTTATAGTTGGGAGACAGATCTCAATCCAAGCCCTGGGGCTCTTTTTAAACGTAAGAGGCACGGATACGGACATGAGACATGGATACGACAC
GACACGGACACAGCGACACGTCATTTTTTTAAAATCTAGGACACTGACACGGCATGGACATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCGAGATGGGCCCTTTGTGCCACTAGCGATCCAAACTCGAGTTGGCTGACTTACTCCAGGGCGAGAATTGAGGGGTTAAAGGAGGAGTGTGTCATGTTGAA
GCCAAAGGGTGAGTATGAAGAGATGATTGTGATAGAAGGGAGTTGGGTTACCCCTTTTTCCCTCGAAGAGGTCCGTATGGTGGTTTTTGGGTTTGATAGGAATAAGGCCC
CATGTTCAGATGGTTTCCCCGTAGCTTTTCTCCAAGGAGGAAAGAGTGAGGAGGGTAAAGGATTGCCCATTAGTTTGGTTAAGAAGTTGAGGAAGGTTCTCCTATCCACG
ATCTCTTATGAAGGAGCCTTTATAGTTGGGAGACAGATCTCAATCCAAGCCCTGGGGCTCTTTTTAAACGTAAGAGGCACGGATACGGACATGAGACATGGATACGACAC
GACACGGACACAGCGACACGTCATTTTTTTAAAATCTAGGACACTGACACGGCATGGACATGTTTAG
Protein sequenceShow/hide protein sequence
MEIARWALCATSDPNSSWLTYSRARIEGLKEECVMLKPKGEYEEMIVIEGSWVTPFSLEEVRMVVFGFDRNKAPCSDGFPVAFLQGGKSEEGKGLPISLVKKLRKVLLST
ISYEGAFIVGRQISIQALGLFLNVRGTDTDMRHGYDTTRTQRHVIFLKSRTLTRHGHV