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Lag0010595 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010595
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr1:1903779..1906077
RNA-Seq ExpressionLag0010595
SyntenyLag0010595
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR002298 - DNA polymerase A
IPR002421 - 5'-3' exonuclease
IPR020046 - 5'-3' exonuclease, alpha-helical arch, N-terminal
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023543412.1 uncharacterized protein LOC111803303 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-4398.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI+SPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

XP_038899891.1 DNA polymerase I isoform X1 [Benincasa hispida]8.8e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMS+KVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

XP_038899894.1 DNA polymerase I, thermostable isoform X3 [Benincasa hispida]8.8e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMS+KVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

XP_038899895.1 DNA polymerase I isoform X4 [Benincasa hispida]8.8e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMS+KVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

XP_038899897.1 DNA polymerase I isoform X6 [Benincasa hispida]8.8e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMS+KVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

TrEMBL top hitse value%identityAlignment
A0A6J1D5H7 DNA-directed DNA polymerase3.0e-4296.81Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRH  YPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVA GCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

A0A6J1D7Q6 DNA-directed DNA polymerase3.0e-4296.81Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRH  YPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVA GCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

A0A6J1EY78 DNA-directed DNA polymerase5.6e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI+SPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

A0A6J1F3S3 DNA-directed DNA polymerase5.6e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI+SPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

A0A6J1HVF9 DNA-directed DNA polymerase5.6e-4498.94Show/hide
Query:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI+SPSLRLLRIAPRGFE
Subjt:  STFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

SwissProt top hitse value%identityAlignment
O52225 DNA polymerase I, thermostable1.3e-1342.35Show/hide
Query:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLL
        +FRH  Y AYK+ R PTP+   + L  +K  +  + +  +E PG EADDV+GTLA ++   G +VR+++ D+DFFQ+LS  + +L
Subjt:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLL

P00582 DNA polymerase I1.1e-1243.53Show/hide
Query:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLL
        TFR   +  YKS+RPP PD +   ++ L A +K+M + ++ V GVEADDVIGTLA  +  AG  V + + DKD  Q+++P++ L+
Subjt:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLL

P19821 DNA polymerase I, thermostable1.9e-1238.04Show/hide
Query:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGF
        +FRH  Y  YK+ R PTP+   + L  +K  +  + +  +EVPG EADDV+ +LA ++   G +VR+++ DKD +Q+LS  + +L   P G+
Subjt:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGF

P30313 DNA polymerase I, thermostable2.2e-1340.22Show/hide
Query:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGF
        +FRH  Y AYK+ R PTP+   + L  +K  +  + +  +EVPG EADDV+ TLA R+   G +VR+++ D+D +Q+LS  + +L   P G+
Subjt:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGF

Q55971 DNA polymerase I1.7e-1343.75Show/hide
Query:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSP
        TFRH    AYKSNR  TP+   + L YL+  +++++++ I   G EADD++GTLA +   AG +V+++S D+D FQ++SP
Subjt:  TFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSP

Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein5.1e-4289.13Show/hide
Query:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQILSPSLRLLR+ PRG E
Subjt:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

AT3G52050.2 5'-3' exonuclease family protein5.1e-4289.13Show/hide
Query:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQILSPSLRLLR+ PRG E
Subjt:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

AT3G52050.3 5'-3' exonuclease family protein5.1e-4289.13Show/hide
Query:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQILSPSLRLLR+ PRG E
Subjt:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

AT3G52050.4 5'-3' exonuclease family protein5.1e-4289.13Show/hide
Query:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQILSPSLRLLR+ PRG E
Subjt:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE

AT3G52050.5 5'-3' exonuclease family protein5.1e-4289.13Show/hide
Query:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE
        FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQILSPSLRLLR+ PRG E
Subjt:  FRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGATCCACTTTTCGTCATACACGTTACCCTGCATACAAGAGTAACAGGCCACCTACACCTGATACCATAGTCCAGGGGCTCCAATACTTGAAGGCATCCATAAA
GTCTATGTCCGTAAAGGTGATTGAGGTACCTGGAGTGGAAGCTGATGATGTAATTGGCACATTGGCTTTGAGAAGTGTTGCTGCTGGCTGTAAGGTTCGCGTTGTCTCCC
CTGACAAAGACTTCTTCCAGATTCTATCTCCTTCACTACGTCTTTTACGAATAGCTCCTCGTGGGTTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACAGATCCACTTTTCGTCATACACGTTACCCTGCATACAAGAGTAACAGGCCACCTACACCTGATACCATAGTCCAGGGGCTCCAATACTTGAAGGCATCCATAAA
GTCTATGTCCGTAAAGGTGATTGAGGTACCTGGAGTGGAAGCTGATGATGTAATTGGCACATTGGCTTTGAGAAGTGTTGCTGCTGGCTGTAAGGTTCGCGTTGTCTCCC
CTGACAAAGACTTCTTCCAGATTCTATCTCCTTCACTACGTCTTTTACGAATAGCTCCTCGTGGGTTTGAGTAA
Protein sequenceShow/hide protein sequence
MHRSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQILSPSLRLLRIAPRGFE