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Lag0010596 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010596
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr1:1912864..1913817
RNA-Seq ExpressionLag0010596
SyntenyLag0010596
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006302 - double-strand break repair (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR036279 - 5'-3' exonuclease, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1214343.1 DNA polymerase I, thermostable [Morella rubra]4.7e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG L PSQFVDVISLVGDKSDNIP +E
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

XP_022149355.1 uncharacterized protein LOC111017796 isoform X1 [Momordica charantia]2.1e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

XP_022149357.1 uncharacterized protein LOC111017796 isoform X3 [Momordica charantia]2.1e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

XP_022149358.1 uncharacterized protein LOC111017796 isoform X4 [Momordica charantia]2.1e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

XP_022149360.1 uncharacterized protein LOC111017796 isoform X5 [Momordica charantia]2.1e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

TrEMBL top hitse value%identityAlignment
A0A6J1D5H5 DNA-directed DNA polymerase1.0e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

A0A6J1D5H7 DNA-directed DNA polymerase1.0e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

A0A6J1D6K2 DNA-directed DNA polymerase1.0e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

A0A6J1D7Q6 DNA-directed DNA polymerase1.0e-1089.74Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        MVSFGLEDFAEKYG LEPSQFVDVISLVGDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

A0A6N2KRA6 DNA-directed DNA polymerase (Fragment)1.7e-1082.5Show/hide
Query:  RMVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        RMVSFG+EDFAEKYGGL PSQFVDV++L+GDKSDNIP +E
Subjt:  RMVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein1.6e-1169.23Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        M SFG+EDFA+K+G LEP+QFVD+I+L GDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

AT3G52050.2 5'-3' exonuclease family protein1.6e-1169.23Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        M SFG+EDFA+K+G LEP+QFVD+I+L GDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

AT3G52050.3 5'-3' exonuclease family protein1.6e-1169.23Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        M SFG+EDFA+K+G LEP+QFVD+I+L GDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

AT3G52050.4 5'-3' exonuclease family protein1.6e-1169.23Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        M SFG+EDFA+K+G LEP+QFVD+I+L GDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE

AT3G52050.5 5'-3' exonuclease family protein1.6e-1169.23Show/hide
Query:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE
        M SFG+EDFA+K+G LEP+QFVD+I+L GDKSDNIP ++
Subjt:  MVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTCTGAGGTAACCGATGGCAGCTCAACCGTGATGATTGACGGAGGTGGCGGCGCGGTGACGATTGGAAGGATGGTGTCTTTTGGGTTGGAGGATTTTGCTGA
AAAATATGGAGGTCTGGAACCTTCTCAGTTTGTTGATGTGATTTCTTTAGTCGGTGACAAATCTGATAATATTCCAGCACTGGAGTACTTTTCTATGCTTCAGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGTCTGAGGTAACCGATGGCAGCTCAACCGTGATGATTGACGGAGGTGGCGGCGCGGTGACGATTGGAAGGATGGTGTCTTTTGGGTTGGAGGATTTTGCTGA
AAAATATGGAGGTCTGGAACCTTCTCAGTTTGTTGATGTGATTTCTTTAGTCGGTGACAAATCTGATAATATTCCAGCACTGGAGTACTTTTCTATGCTTCAGGTCTAA
Protein sequenceShow/hide protein sequence
MAMSEVTDGSSTVMIDGGGGAVTIGRMVSFGLEDFAEKYGGLEPSQFVDVISLVGDKSDNIPALEYFSMLQV