; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010603 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010603
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:2005276..2008860
RNA-Seq ExpressionLag0010603
SyntenyLag0010603
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG56498.1 hypothetical protein EZV62_017811 [Acer yangbiense]3.4e-3136.1Show/hide
Query:  GEVVAWLFSGIR-QSFSVSSLIPRTILMDGLIGMIVVGALLVSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQ
        G ++ W    +R QSFS   +  R +L +GL  M        S  FP    R  +W LL RLR     PW  GGDFN +L   EK+GG  + V  +A+F+
Subjt:  GEVVAWLFSGIR-QSFSVSSLIPRTILMDGLIGMIVVGALLVSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQ

Query:  NVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIP----RSKQCMSSMAEWGRSKSGNFTKC
          ID C L+D+GF   + TW NRR G+  I ERLD  F+   W D + N  V HL Y+  DHRPI + ++       +   C   + +W + K G   K 
Subjt:  NVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIP----RSKQCMSSMAEWGRSKSGNFTKC

Query:  INVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELY
        IN    +++  I+  R  G  E + R E +LE++L +EE+Y
Subjt:  INVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELY

XP_023908468.1 uncharacterized protein LOC112020138 [Quercus suber]1.6e-3622.27Show/hide
Query:  TWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNH
        +W+ L RLRG +  PW   GDFN +    EK GGR +P  ++  F++V+D CG  DLGF G +FTWCN  P    I+ERLDR  +T+ W D +P   V H
Subjt:  TWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNH

Query:  LDYSKSDHRPIEVVLNPIPRSKQ-----------------------------------------CMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRV
        L+   SDH+PI + L  IP+ +Q                                           + +  W R   GN T+ +    + ++ A  +   
Subjt:  LDYSKSDHRPIEVVLNPIPRSKQ-----------------------------------------CMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRV

Query:  SGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG----------------------IEIPMGYWSVH------------------------------
          S   + R + ++ D+L +EE  WKQRSR     +G                      +E  +G   V                               
Subjt:  SGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG----------------------IEIPMGYWSVH------------------------------

Query:  ------------------KEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVLLAEDHASNGV--CFFVGDLIYGVDLKFV----KIGSGVR--------
                          + EV +AL Q  PLK+PGPDG   +F +    V+    +  +  V  C   G +   ++  F+    K+ S VR        
Subjt:  ------------------KEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVLLAEDHASNGV--CFFVGDLIYGVDLKFV----KIGSGVR--------

Query:  ---------------------SRVEGQVFF---------------------------------YGR----------------------------------
                             +R +  +FF                                  GR                                  
Subjt:  ---------------------SRVEGQVFF---------------------------------YGR----------------------------------

Query:  -----------------------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSVGGC----PSFFHM----------
                               EI   + KF+WG   + R+IHW  WE LC PK  GGLGF+++E FN ++LA  V        S F+           
Subjt:  -----------------------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSVGGC----PSFFHM----------

Query:  ----AQPPLGSGAPCS--------------------GMSLADWEWL----SISIMAPTGCRM----------------------------------SFPP
            A    GS A  S                     +++    WL    S  I++P    +                                  + P 
Subjt:  ----AQPPLGSGAPCS--------------------GMSLADWEWL----SISIMAPTGCRM----------------------------------SFPP

Query:  EW---------------DFLCQSGYRS-SYFGYQYQPSTSNADCMRAWWIGLWRLHIPNKHKFFLWRLFHDRLPTKD
         W               ++L +SGY+           S+S++    A+W  LW+LH+PNK KFFLWR+  + LPTKD
Subjt:  EW---------------DFLCQSGYRS-SYFGYQYQPSTSNADCMRAWWIGLWRLHIPNKHKFFLWRLFHDRLPTKD

XP_030498017.1 uncharacterized protein LOC115713672 [Cannabis sativa]1.0e-3032.13Show/hide
Query:  VSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTV
        V  G P A     +W LL RL+G  + PW  GGDFN +L  +E++GG D+ +S +  FQ  +D+C LVD+GF G  FTW N+R G   + ERLDR F   
Subjt:  VSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTV

Query:  GWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIPRSK----------------------------------------------QCMSSMAEWGRSKSGNFTK
         W  L+P+  V + D+  SDHRPI  VL  I RS                                               +C   +  W +SK G+  K
Subjt:  GWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIPRSK----------------------------------------------QCMSSMAEWGRSKSGNFTK

Query:  CINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRS
         +    +++   ++   +    + + R E +L D+L  EE YWK RSR+
Subjt:  CINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRS

XP_037492746.1 uncharacterized protein LOC105643399 [Jatropha curcas]7.6e-3135.19Show/hide
Query:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ
        G P    R  +W++L  L G    PW I GDFN L+   EK+G    P   L  F + +  CGLVDLG  G  FTW + R GQ  + ERLDR    + WQ
Subjt:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ

Query:  DLYPNYVVNHLDYSKSDHRPIEVVLNP----------IPRSKQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEE
        + +PNY+V +L  S+SDH P+ ++ +P            + K C   +  WGR     F +      +K+   + +LR+SG+ E     +  L+DVL  E
Subjt:  DLYPNYVVNHLDYSKSDHRPIEVVLNP----------IPRSKQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEE

Query:  ELYWKQRSRSFGCRKG
        E++W QR++S   + G
Subjt:  ELYWKQRSRSFGCRKG

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]1.5e-3131.45Show/hide
Query:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ
        G P  ++R +TW+ +  LRG+   PW + GDFN +LC  EK GGR++P  ++ +F+ ++D C  VDLGF+G  FTWCN+R  Q  + ERLDR  +  GW 
Subjt:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ

Query:  DLYPNYVVNHLDYSKSDHRPIEVVLNPIPRSKQ------------------------------------------CMSSMAEWGRSKSGNFTKCINVANQ
        D +P + V H   + SDH PI +       SK+                                          C   +A+W ++K GN  K I     
Subjt:  DLYPNYVVNHLDYSKSDHRPIEVVLNPIPRSKQ------------------------------------------CMSSMAEWGRSKSGNFTKCINVANQ

Query:  KVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG
         +Q            EL   A  QL+  L+ EE+ W QR++S   + G
Subjt:  KVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG

TrEMBL top hitse value%identityAlignment
A0A2N9FHJ0 Uncharacterized protein9.1e-3823.54Show/hide
Query:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ
        G P    R +TW LL RL G  + PW   GDFN ++  +E  G   +P  ++ +F++V+D CGLVDLGF G  FTWCN R      + RLDR  +T  W 
Subjt:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ

Query:  DLYPNYVVNHLDYSKSDHRPIEVVLNP-------------------------------------------IPRSKQCMSSMAEWGRSKSGNFTKCINVAN
          YP   V+H+D  KSDH+ + +V  P                                             + K+C   +  W R K GN  K I    
Subjt:  DLYPNYVVNHLDYSKSDHRPIEVVLNP-------------------------------------------IPRSKQCMSSMAEWGRSKSGNFTKCINVAN

Query:  QKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSF----GCRK------------------GIEIPMGYW--------------------S
         +++ A A      +   L     +L  + ++EE  W+QRSRS     G R                   G++  +G W                    +
Subjt:  QKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSF----GCRK------------------GIEIPMGYW--------------------S

Query:  VHKE----------------------------EVLLALKQTHPLKAPGPDGCLV-----VFQESL-----------GGVVL-------LAEDHASNGVCF
         H +                            EV LALKQ  P KAPGPDG L+     V  E+L           G + L       L    A+   C 
Subjt:  VHKE----------------------------EVLLALKQTHPLKAPGPDGCLV-----VFQESL-----------GGVVL-------LAEDHASNGVCF

Query:  FVGDLIYGVDLKFVKIGSGVRSRVEGQVFF---------------------------------------------------------------YGREI--
           + I G+  ++ K      +R +  ++F                                                                GREI  
Subjt:  FVGDLIYGVDLKFVKIGSGVRSRVEGQVFF---------------------------------------------------------------YGREI--

Query:  --------------------HRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV----GGCPSFFHMAQPPLGSGAPCSGMS
                               + +FWW    + R+IHW++W  LC PK  GG+GFR++  FN +LLA  +        + F           P S   
Subjt:  --------------------HRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV----GGCPSFFHMAQPPLGSGAPCSGMS

Query:  LADWEWLSISIMAPTGCRMSFPPEWDFLCQSGYRSSYFGYQYQ-PSTSNADCMRAWWIGLWRLHIPNKHKFFLWRLFHDRLPTK
         AD       I+ P+          ++  +SGYR      +   P +S  + ++  W  +W L IP K + F W+   + LPTK
Subjt:  LADWEWLSISIMAPTGCRMSFPPEWDFLCQSGYRSSYFGYQYQ-PSTSNADCMRAWWIGLWRLHIPNKHKFFLWRLFHDRLPTK

A0A2N9HAZ4 Uncharacterized protein7.4e-4027.82Show/hide
Query:  PLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDL
        P   +R ++W+LL  L   S  PW   GDFN ++  +EK+G   +  S++ +F++V+D CG VDLG+ G  FTWC  R     ++ERLDR  +T  W +L
Subjt:  PLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDL

Query:  YPNYVVNHLDYSKSDHRPIEVVLNPIPRSKQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFG
        +P   V+HLD  +SDH+                     W R+  G+    +    Q+++        SGS   +   ++ L  +L +EE  W QRSRS  
Subjt:  YPNYVVNHLDYSKSDHRPIEVVLNPIPRSKQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFG

Query:  CRKG----------------------IEIPMGYW----------------------------SVHKEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVL
         + G                      I+   G W                              +  EV  ALKQ   LKA GPDG   +F +    +V 
Subjt:  CRKG----------------------IEIPMGYW----------------------------SVHKEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVL

Query:  LAEDHASNGVCFFVGDLIYGVDLKFVKIGSGVRSRVEGQVFFYGREIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV
             A+N V   + +                                    KFWWG   D R++ WI W+++CLPK MG +GFR+++ FN++LL+  V
Subjt:  LAEDHASNGVCFFVGDLIYGVDLKFVKIGSGVRSRVEGQVFFYGREIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV

A0A2N9HLX2 Uncharacterized protein2.0e-4027.63Show/hide
Query:  LFSGIRQSFSVSSLIPRTILMDGLIGMIVVGALLVSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCG
        LF     S S+SS     I     IG  V        G P A  +   W LL  LR     PW  GGDFN  L  +EK G   +P S++ +F+ V+D CG
Subjt:  LFSGIRQSFSVSSLIPRTILMDGLIGMIVVGALLVSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCG

Query:  LVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIPRS--------------------------------
         VDLGFVG  +TW N++ G   + ERLDRC ++  W   +PN  V HL    SDHRP+ V L  + RS                                
Subjt:  LVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIPRS--------------------------------

Query:  ------------KQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSR-ELLCRAEAQLEDVLQEEELYWKQRSRS------------FGCR--
                    K C   + +W     G+    I    + +Q    +LR      +++ +   +L D+  +EE  WKQRSR+            F C+  
Subjt:  ------------KQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSR-ELLCRAEAQLEDVLQEEELYWKQRSRS------------FGCR--

Query:  --------KGIEIPMGYWSVH------------------------------------------------KEEVLLALKQTHPLKAPGPDGCLVVFQESLG
                +GI    G W                                                   +EEV  AL Q  PLK PGPDG L+     + 
Subjt:  --------KGIEIPMGYWSVH------------------------------------------------KEEVLLALKQTHPLKAPGPDGCLVVFQESLG

Query:  GVVLLAEDHASNGVCFFVGDLIYGVDLKFVKIGSGVRSRVEGQVFFYGREIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLA
           L    H         G +   +D+      S    RVE   F     +    A  WWG + +  ++HW+ W+SLC PK +GG+GFR +  FN++LLA
Subjt:  GVVLLAEDHASNGVCFFVGDLIYGVDLKFVKIGSGVRSRVEGQVFFYGREIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLA

Query:  SSV
          V
Subjt:  SSV

A0A2N9J5F1 Uncharacterized protein1.9e-3526.05Show/hide
Query:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ
        G P  + RP TW L+ +L G  + PW   GDFN ++  +E  G   +   ++ +F NV+D CGLVDLGF G  FTWCN R      + RLDR   T+ W 
Subjt:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ

Query:  DLYPNYVVNHLDYSKSDH-------------------------------------------RPIEVVLNPIPRSKQCMSSMAEWGRSKSGNFTKCINVAN
        + +P   V+HLD  KSDH                                           RP   +     + ++C   +  W     GN  K I    
Subjt:  DLYPNYVVNHLDYSKSDH-------------------------------------------RPIEVVLNPIPRSKQCMSSMAEWGRSKSGNFTKCINVAN

Query:  QKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG--------------------IEIPMGYWSVH--------------------
         +++ A        S E L     +L  + ++EE  W+QRSRS     G                    +E+     + H                    
Subjt:  QKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEELYWKQRSRSFGCRKG--------------------IEIPMGYWSVH--------------------

Query:  --KEEVLLALKQTHPLKAPGPD-GCLVVFQES-----LGGVVLLAEDHASNGVCFFVGDLIYGVDL---------------KFVKIGSGV-RSRVEGQVF
            EV LALKQ  P KAPGPD G   + Q++     + G+ L         + F    L++                   K++ + S V R+R E    
Subjt:  --KEEVLLALKQTHPLKAPGPD-GCLVVFQES-----LGGVVLLAEDHASNGVCFFVGDLIYGVDL---------------KFVKIGSGV-RSRVEGQVF

Query:  FYGR------------------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV
           R                  ++   + +FWW    +  +IHW++W  LC PK  GG+GFR++  FN +LLA  V
Subjt:  FYGR------------------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSV

A0A803L0F3 Uncharacterized protein8.0e-3428.02Show/hide
Query:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ
        G+P    +  T  LL RL  + + PW  GGDFN +L   EK GGR+    E    +  I  C L DLG++G  FTW N R G E I E LDR  +   W+
Subjt:  GFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVDLGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQ

Query:  DLYPNYVVNHLDYSKSDHRPIEVVLN---PIPRSK------QCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEE
        + +P   V+HL   +S+H PI + +     +P+ K      +    ++ W R K G+F   ++    +++  + + +       +   + +++++ + EE
Subjt:  DLYPNYVVNHLDYSKSDHRPIEVVLN---PIPRSK------QCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELLCRAEAQLEDVLQEEE

Query:  LYWKQRSRSFGCRKGIEIPMGYWSVHKEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVLLAEDHASNGVCFFVGD-LIYGVDLKFVKIGSGVRSRVEG
        +YWKQRSR    + G +    + +  K+      ++ +  K     G     +E +  V +   +    G      D +I    + F+      R  +  
Subjt:  LYWKQRSRSFGCRKGIEIPMGYWSVHKEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVLLAEDHASNGVCFFVGD-LIYGVDLKFVKIGSGVRSRVEG

Query:  QVFFYGR-------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLL
          F   R        I +   +F+WG   + R++  I+W  L LPK  GGLGFRNM  FN+SLL
Subjt:  QVFFYGR-------EIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLL

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003107.2e-0834.31Show/hide
Query:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPK-CMGGLGFRNMELFNQSLLASSVGGCPSFFHMAQP-------------PLGSGAPCSGMSLADWEWL
        +++  +M +FWW   E+ R+I W++W+ LC  K   GGLGFR++  FNQ+LLA       SF  + QP             P  S   CS  +   + W 
Subjt:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPK-CMGGLGFRNMELFNQSLLASSVGGCPSFFHMAQP-------------PLGSGAPCSGMSLADWEWL

Query:  SI
        SI
Subjt:  SI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-0732.18Show/hide
Query:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSVGGCPS-------------FFHMAQP---PLGS
        ++I   +A FWW   ++A+ +HW +W+ L   K  GG+GF+++E FN +LL   +    S             +FH + P   PLGS
Subjt:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSVGGCPS-------------FFHMAQP---PLGS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.1e-0934.31Show/hide
Query:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPK-CMGGLGFRNMELFNQSLLASSVGGCPSFFHMAQP-------------PLGSGAPCSGMSLADWEWL
        +++  +M +FWW   E+ R+I W++W+ LC  K   GGLGFR++  FNQ+LLA       SF  + QP             P  S   CS  +   + W 
Subjt:  REIHRSMAKFWWGGAEDARRIHWISWESLCLPK-CMGGLGFRNMELFNQSLLASSVGGCPSFFHMAQP-------------PLGSGAPCSGMSLADWEWL

Query:  SI
        SI
Subjt:  SI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAAGTGGTGGCTTGGCTCTTCTCTGGGATTCGTCAGTCTTTTTCAGTCTCATCTCTTATTCCAAGAACCATATTGATGGATGGGTTGATTGGGATGATTGTCGT
TGGCGCCTTACTGGTTTCTATGGGTTTCCCCTTAGCAGATATGCGACCTCAGACGTGGTCTCTTCTCTCTAGGTTAAGGGGTAGTTCTGAAACTCCGTGGTTTATTGGAG
GGGACTTTAATGCGCTTTTGTGTCATGATGAGAAGGAGGGGGGTAGGGACAAACCGGTATCTGAGTTGGCTTCTTTTCAGAACGTGATTGACTCGTGTGGGTTAGTGGAT
CTTGGGTTTGTTGGGGATCGGTTCACGTGGTGCAATAGGAGGCCAGGGCAGGAGCTAATCTTTGAGCGGTTGGATCGTTGTTTTAGTACGGTGGGGTGGCAGGATCTCTA
TCCGAATTATGTGGTTAATCATCTGGATTATAGTAAATCTGATCATAGGCCGATTGAAGTGGTCCTTAACCCAATTCCAAGGTCAAAGCAGTGTATGAGCTCTATGGCTG
AATGGGGGCGATCAAAGTCTGGTAATTTTACTAAGTGTATCAATGTGGCCAATCAAAAGGTTCAGGCAGCTATTGCTGACTTGAGAGTATCGGGCTCTAGAGAGCTGCTT
TGTAGGGCTGAGGCTCAGTTAGAGGACGTGCTTCAGGAGGAGGAGCTGTATTGGAAACAACGGTCTAGGAGCTTTGGCTGCAGGAAGGGGATCGAAATACCGATGGGTTA
TTGGTCCGTTCACAAGGAGGAGGTCCTTCTTGCTTTGAAACAAACTCATCCTCTTAAGGCTCCAGGTCCGGATGGCTGTCTGGTAGTTTTTCAAGAATCACTGGGTGGAG
TGGTCCTTCTTGCAGAGGATCATGCTTCGAATGGGGTTTGCTTCTTCGTGGGTGATCTGATTTACGGTGTGGACCTGAAGTTTGTAAAGATAGGGTCTGGCGTCAGATCC
AGGGTGGAAGGGCAAGTTTTTTTCTACGGCAGGGAAATCCATCGATCTATGGCCAAGTTCTGGTGGGGTGGTGCGGAGGATGCAAGACGGATTCACTGGATCAGTTGGGA
GTCGTTGTGCTTGCCTAAGTGTATGGGGGGTCTGGGCTTTCGGAATATGGAGTTGTTTAATCAGTCTCTTTTGGCAAGCAGTGTTGGCGGGTGCCCGTCCTTCTTTCATA
TGGCGCAGCCTCCTTTGGGGTCGGGAGCTCCTTGCTCGGGGATGTCGTTGGCGGATTGGGAATGGCTTTCTATCTCAATTATGGCTCCAACTGGTTGCCGAATGAGTTTT
CCTCCAGAATGGGATTTTCTCTGTCAAAGTGGCTATCGTAGCTCATACTTTGGCTATCAGTATCAACCCTCGACGTCGAATGCTGATTGTATGCGTGCATGGTGGATTGG
TCTGTGGAGGTTGCATATTCCGAACAAACATAAGTTCTTTCTTTGGCGTTTATTTCATGATCGTTTGCCGACGAAGGATATCGGGAGATGGCAACCACCTCCTCAGGGTG
TTTTTAAGCTGAATGTGGATGCTTCAGTCCATCCTGATTCAGGGTGCTCCGGTGGATGCATTATGCGTGATTCCTCTGGTGCGGTCCTTTTTCGGCATGCTCTGAATTGC
CGAGATGTGGAGCGTGGATTTGGCGAAGGGTTGGTCCCTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAAGTGGTGGCTTGGCTCTTCTCTGGGATTCGTCAGTCTTTTTCAGTCTCATCTCTTATTCCAAGAACCATATTGATGGATGGGTTGATTGGGATGATTGTCGT
TGGCGCCTTACTGGTTTCTATGGGTTTCCCCTTAGCAGATATGCGACCTCAGACGTGGTCTCTTCTCTCTAGGTTAAGGGGTAGTTCTGAAACTCCGTGGTTTATTGGAG
GGGACTTTAATGCGCTTTTGTGTCATGATGAGAAGGAGGGGGGTAGGGACAAACCGGTATCTGAGTTGGCTTCTTTTCAGAACGTGATTGACTCGTGTGGGTTAGTGGAT
CTTGGGTTTGTTGGGGATCGGTTCACGTGGTGCAATAGGAGGCCAGGGCAGGAGCTAATCTTTGAGCGGTTGGATCGTTGTTTTAGTACGGTGGGGTGGCAGGATCTCTA
TCCGAATTATGTGGTTAATCATCTGGATTATAGTAAATCTGATCATAGGCCGATTGAAGTGGTCCTTAACCCAATTCCAAGGTCAAAGCAGTGTATGAGCTCTATGGCTG
AATGGGGGCGATCAAAGTCTGGTAATTTTACTAAGTGTATCAATGTGGCCAATCAAAAGGTTCAGGCAGCTATTGCTGACTTGAGAGTATCGGGCTCTAGAGAGCTGCTT
TGTAGGGCTGAGGCTCAGTTAGAGGACGTGCTTCAGGAGGAGGAGCTGTATTGGAAACAACGGTCTAGGAGCTTTGGCTGCAGGAAGGGGATCGAAATACCGATGGGTTA
TTGGTCCGTTCACAAGGAGGAGGTCCTTCTTGCTTTGAAACAAACTCATCCTCTTAAGGCTCCAGGTCCGGATGGCTGTCTGGTAGTTTTTCAAGAATCACTGGGTGGAG
TGGTCCTTCTTGCAGAGGATCATGCTTCGAATGGGGTTTGCTTCTTCGTGGGTGATCTGATTTACGGTGTGGACCTGAAGTTTGTAAAGATAGGGTCTGGCGTCAGATCC
AGGGTGGAAGGGCAAGTTTTTTTCTACGGCAGGGAAATCCATCGATCTATGGCCAAGTTCTGGTGGGGTGGTGCGGAGGATGCAAGACGGATTCACTGGATCAGTTGGGA
GTCGTTGTGCTTGCCTAAGTGTATGGGGGGTCTGGGCTTTCGGAATATGGAGTTGTTTAATCAGTCTCTTTTGGCAAGCAGTGTTGGCGGGTGCCCGTCCTTCTTTCATA
TGGCGCAGCCTCCTTTGGGGTCGGGAGCTCCTTGCTCGGGGATGTCGTTGGCGGATTGGGAATGGCTTTCTATCTCAATTATGGCTCCAACTGGTTGCCGAATGAGTTTT
CCTCCAGAATGGGATTTTCTCTGTCAAAGTGGCTATCGTAGCTCATACTTTGGCTATCAGTATCAACCCTCGACGTCGAATGCTGATTGTATGCGTGCATGGTGGATTGG
TCTGTGGAGGTTGCATATTCCGAACAAACATAAGTTCTTTCTTTGGCGTTTATTTCATGATCGTTTGCCGACGAAGGATATCGGGAGATGGCAACCACCTCCTCAGGGTG
TTTTTAAGCTGAATGTGGATGCTTCAGTCCATCCTGATTCAGGGTGCTCCGGTGGATGCATTATGCGTGATTCCTCTGGTGCGGTCCTTTTTCGGCATGCTCTGAATTGC
CGAGATGTGGAGCGTGGATTTGGCGAAGGGTTGGTCCCTGTATAA
Protein sequenceShow/hide protein sequence
MGEVVAWLFSGIRQSFSVSSLIPRTILMDGLIGMIVVGALLVSMGFPLADMRPQTWSLLSRLRGSSETPWFIGGDFNALLCHDEKEGGRDKPVSELASFQNVIDSCGLVD
LGFVGDRFTWCNRRPGQELIFERLDRCFSTVGWQDLYPNYVVNHLDYSKSDHRPIEVVLNPIPRSKQCMSSMAEWGRSKSGNFTKCINVANQKVQAAIADLRVSGSRELL
CRAEAQLEDVLQEEELYWKQRSRSFGCRKGIEIPMGYWSVHKEEVLLALKQTHPLKAPGPDGCLVVFQESLGGVVLLAEDHASNGVCFFVGDLIYGVDLKFVKIGSGVRS
RVEGQVFFYGREIHRSMAKFWWGGAEDARRIHWISWESLCLPKCMGGLGFRNMELFNQSLLASSVGGCPSFFHMAQPPLGSGAPCSGMSLADWEWLSISIMAPTGCRMSF
PPEWDFLCQSGYRSSYFGYQYQPSTSNADCMRAWWIGLWRLHIPNKHKFFLWRLFHDRLPTKDIGRWQPPPQGVFKLNVDASVHPDSGCSGGCIMRDSSGAVLFRHALNC
RDVERGFGEGLVPV