; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010607 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010607
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr1:2118039..2119999
RNA-Seq ExpressionLag0010607
SyntenyLag0010607
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily
IPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]6.8e-3465.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   ESLP+SFLQF SN VM+KI YT+TTLL+ELQT++SLMK KGQ+GEANVATS + FH+GS+ GTKS+ SSS +K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
            AAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

KAA0040448.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-3465.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   +SLP+SFLQF SN VM+KI YT+TTLL+ELQ ++SLMK KGQ+GEANVATS + FH+GS+ GTKSV SSS  K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
           PAAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3854.43Show/hide
Query:  NIKSRSDYVMHPQGISLPPFESNQRTTDI-SPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRI
        N +S+ ++ M P+G+ +PP   +QRT++   PP LH  SV L  + ++NF MLPKG+ IPPSGPS++TS+YPPPP +  S I+  +S +N GMLPKGV I
Subjt:  NIKSRSDYVMHPQGISLPPFESNQRTTDI-SPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRI

Query:  PPSRPSQRTSNYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP
        PPS PSQRTS+YPPPPP   SVI+  + + NF  L KGV IPPS  S+R SN P PPP
Subjt:  PPSRPSQRTSNYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP

TYK28896.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-3465.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   +SLP+SFLQF SN VM+KI YT+TTLL+ELQ ++SLMK KGQ+GEANVATS + FH+GS+ GTKSV SSS  K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
           PAAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]2.5e-3653.38Show/hide
Query:  MHPQGISLPPFESNQRTTDISPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRIPPSRPSQRTS
        M P+G+ +PP   +QRT+D  PP     S+ L K  ++N  MLP+G+ IPPSGPS++TS+YPPPP +  S+I+ K+S +N GMLPKGV IPPS PSQRTS
Subjt:  MHPQGISLPPFESNQRTTDISPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRIPPSRPSQRTS

Query:  NYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP
         YPPPPP   SVI+ K+ +     L +GV IPP  LS+R S+ P PPP
Subjt:  NYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.3e-3465.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   ESLP+SFLQF SN VM+KI YT+TTLL+ELQT++SLMK KGQ+GEANVATS + FH+GS+ GTKS+ SSS  K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
            AAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

A0A5A7SMN4 Gag/pol protein3.3e-3465.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   ESLP+SFLQF SN VM+KI YT+TTLL+ELQT++SLMK KGQ+GEANVATS + FH+GS+ GTKS+ SSS +K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
            AAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

A0A5A7TC08 Gag/pol protein8.6e-3565.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   +SLP+SFLQF SN VM+KI YT+TTLL+ELQ ++SLMK KGQ+GEANVATS + FH+GS+ GTKSV SSS  K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
           PAAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

A0A5D3DYU3 Gag/pol protein8.6e-3565.93Show/hide
Query:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK
        MNG VIDE SQVS   +SLP+SFLQF SN VM+KI YT+TTLL+ELQ ++SLMK KGQ+GEANVATS + FH+GS+ GTKSV SSS  K +KKKK G+G 
Subjt:  MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATS-KGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGK

Query:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP
           PAAA    KAK A KG CFHCN + HWK NCP
Subjt:  ADTPAAATEKGKAKVANKGKCFHCNVDEHWKINCP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.2e-3653.38Show/hide
Query:  MHPQGISLPPFESNQRTTDISPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRIPPSRPSQRTS
        M P+G+ +PP   +QRT+D  PP     S+ L K  ++N  MLP+G+ IPPSGPS++TS+YPPPP +  S+I+ K+S +N GMLPKGV IPPS PSQRTS
Subjt:  MHPQGISLPPFESNQRTTDISPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKESWVNIGMLPKGVRIPPSRPSQRTS

Query:  NYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP
         YPPPPP   SVI+ K+ +     L +GV IPP  LS+R S+ P PPP
Subjt:  NYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGTACTGTCATTGACGAGCGGAGTCAAGTCAGCTTATTCTTTGAATCTCTTCCAAAGAGTTTTCTACAGTTCCTCAGTAATGTTGTGATGCACAAGATAGAGTA
TACCGTCACTACTCTTCTTAGTGAGCTACAGACTTATCAGTCTCTTATGAAGAATAAGGGACAAGAGGGGGAGGCAAACGTTGCCACCTCCAAAGGTTTCCATCAAGGAT
CATCCTTAGGAACCAAGTCTGTGTCATCTTCTTCTCGCACTAAGAGTTTCAAGAAGAAAAAGTGTGGTAAGGGGAAAGCTGACACTCCTGCTGCTGCTACCGAAAAGGGA
AAGGCCAAGGTTGCTAACAAAGGAAAATGTTTCCACTGCAACGTGGATGAGCATTGGAAGATAAACTGTCCTAATATCAAATCGAGATCCGATTATGTTATGCATCCCCA
AGGCATATCTCTTCCTCCATTTGAGTCGAATCAAAGGACAACAGACATATCACCTCCTCTTCTGCATGTTGGATCTGTTAGTTTAAAGAAGGAACCTAGAATGAACTTTG
AAATGTTACCAAAAGGTATACATATTCCTCCATCTGGGCCAAGTAAAAAGACCTCGAACTATCCGCCTCCTCCACTATATGATCCATCTATCATTATAAAGAAGGAATCT
TGGGTAAACATTGGAATGTTACCAAAAGGTGTACGTATTCCTCCATCTCGGCCAAGTCAAAGGACATCAAACTATCCACCTCCTCCACCTCTTACTCCATCTGTCATTGT
CAAGAAGGAATTTAGGACAAACTTTCAAACGTTATCAAAAGGTGTACGTATTCCCCCATCGACGTTAAGTAAAAGAGCATCAAACCTACCTCTTCCTCCGCCATGCTCCT
TTTGTCATTTTAGAGAAAGAATAAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGTACTGTCATTGACGAGCGGAGTCAAGTCAGCTTATTCTTTGAATCTCTTCCAAAGAGTTTTCTACAGTTCCTCAGTAATGTTGTGATGCACAAGATAGAGTA
TACCGTCACTACTCTTCTTAGTGAGCTACAGACTTATCAGTCTCTTATGAAGAATAAGGGACAAGAGGGGGAGGCAAACGTTGCCACCTCCAAAGGTTTCCATCAAGGAT
CATCCTTAGGAACCAAGTCTGTGTCATCTTCTTCTCGCACTAAGAGTTTCAAGAAGAAAAAGTGTGGTAAGGGGAAAGCTGACACTCCTGCTGCTGCTACCGAAAAGGGA
AAGGCCAAGGTTGCTAACAAAGGAAAATGTTTCCACTGCAACGTGGATGAGCATTGGAAGATAAACTGTCCTAATATCAAATCGAGATCCGATTATGTTATGCATCCCCA
AGGCATATCTCTTCCTCCATTTGAGTCGAATCAAAGGACAACAGACATATCACCTCCTCTTCTGCATGTTGGATCTGTTAGTTTAAAGAAGGAACCTAGAATGAACTTTG
AAATGTTACCAAAAGGTATACATATTCCTCCATCTGGGCCAAGTAAAAAGACCTCGAACTATCCGCCTCCTCCACTATATGATCCATCTATCATTATAAAGAAGGAATCT
TGGGTAAACATTGGAATGTTACCAAAAGGTGTACGTATTCCTCCATCTCGGCCAAGTCAAAGGACATCAAACTATCCACCTCCTCCACCTCTTACTCCATCTGTCATTGT
CAAGAAGGAATTTAGGACAAACTTTCAAACGTTATCAAAAGGTGTACGTATTCCCCCATCGACGTTAAGTAAAAGAGCATCAAACCTACCTCTTCCTCCGCCATGCTCCT
TTTGTCATTTTAGAGAAAGAATAAAAGTTTAA
Protein sequenceShow/hide protein sequence
MNGTVIDERSQVSLFFESLPKSFLQFLSNVVMHKIEYTVTTLLSELQTYQSLMKNKGQEGEANVATSKGFHQGSSLGTKSVSSSSRTKSFKKKKCGKGKADTPAAATEKG
KAKVANKGKCFHCNVDEHWKINCPNIKSRSDYVMHPQGISLPPFESNQRTTDISPPLLHVGSVSLKKEPRMNFEMLPKGIHIPPSGPSKKTSNYPPPPLYDPSIIIKKES
WVNIGMLPKGVRIPPSRPSQRTSNYPPPPPLTPSVIVKKEFRTNFQTLSKGVRIPPSTLSKRASNLPLPPPCSFCHFRERIKV