| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032988.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 2.1e-20 | 80.6 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL
NSGAV N KEP+SHKRGKHIE KYHLIREIVQR D+I TKIALEHNI DPF K L AKFFE HLE L
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL
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| KAA0049822.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.8e-23 | 60.78 | Show/hide |
Query: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
+ FKEP+SHKRGKHIE KYHLIREIVQR D+I TKIA E+NI DPF K L AK FE H+E L E Q ADSI LSFWGQDRV W
Subjt: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
Query: EH
+H
Subjt: EH
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| TYK05792.1 gag/pol protein [Cucumis melo var. makuwa] | 7.0e-32 | 62.81 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQD
NSGAV + KEP+SHKRGKHI KYHLIREIVQR D+I TKIALEHNI +PF K L AK FE H E L E Q DSI LSFWGQD
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQD
Query: RVESWEHNHTRWNSLLPDFEE
RV SWEHNHTRWNS +P F +
Subjt: RVESWEHNHTRWNSLLPDFEE
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| TYK08698.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.8e-23 | 60.78 | Show/hide |
Query: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
+ FKEP+SHKRGKHIE KYHLIREIVQR D+I TKIA E+NI DPF K L AK FE H+E L E Q ADSI LSFWGQDRV W
Subjt: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
Query: EH
+H
Subjt: EH
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| TYK27885.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.3e-25 | 52.55 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECLE-----------GDQYADSI-SLSFWGQDRVES
NSGAV N KEP+SHKRGKHIE KYHLIREIVQR D+I TKIA EHNI DP+ K L AKFFE HLE L QYA + WG + +
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECLE-----------GDQYADSI-SLSFWGQDRVES
Query: WEHNHTRWNSLLPDFEEVDECFLKWCLWVLNKGPYPL
+ H P VD+C L+WC+ LNK PYPL
Subjt: WEHNHTRWNSLLPDFEEVDECFLKWCLWVLNKGPYPL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SR15 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 1.0e-20 | 80.6 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL
NSGAV N KEP+SHKRGKHIE KYHLIREIVQR D+I TKIALEHNI DPF K L AKFFE HLE L
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL
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| A0A5A7U202 Reverse transcriptase | 3.8e-23 | 60.78 | Show/hide |
Query: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
+ FKEP+SHKRGKHIE KYHLIREIVQR D+I TKIA E+NI DPF K L AK FE H+E L E Q ADSI LSFWGQDRV W
Subjt: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
Query: EH
+H
Subjt: EH
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| A0A5D3C3J6 Gag/pol protein | 3.4e-32 | 62.81 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQD
NSGAV + KEP+SHKRGKHI KYHLIREIVQR D+I TKIALEHNI +PF K L AK FE H E L E Q DSI LSFWGQD
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQD
Query: RVESWEHNHTRWNSLLPDFEE
RV SWEHNHTRWNS +P F +
Subjt: RVESWEHNHTRWNSLLPDFEE
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| A0A5D3CBX3 Reverse transcriptase | 3.8e-23 | 60.78 | Show/hide |
Query: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
+ FKEP+SHKRGKHIE KYHLIREIVQR D+I TKIA E+NI DPF K L AK FE H+E L E Q ADSI LSFWGQDRV W
Subjt: TNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECL----------------EGDQYADSISLSFWGQDRVESW
Query: EH
+H
Subjt: EH
|
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| A0A5D3DX33 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 6.2e-26 | 52.55 | Show/hide |
Query: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECLE-----------GDQYADSI-SLSFWGQDRVES
NSGAV N KEP+SHKRGKHIE KYHLIREIVQR D+I TKIA EHNI DP+ K L AKFFE HLE L QYA + WG + +
Subjt: NSGAVTNFKEPQSHKRGKHIEHKYHLIREIVQRADMISTKIALEHNIVDPFMKALIAKFFEDHLECLE-----------GDQYADSI-SLSFWGQDRVES
Query: WEHNHTRWNSLLPDFEEVDECFLKWCLWVLNKGPYPL
+ H P VD+C L+WC+ LNK PYPL
Subjt: WEHNHTRWNSLLPDFEEVDECFLKWCLWVLNKGPYPL
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