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Lag0010624 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010624
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:2474706..2475454
RNA-Seq ExpressionLag0010624
SyntenyLag0010624
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149796.1 uncharacterized protein LOC111018143 [Momordica charantia]2.0e-3551.4Show/hide
Query:  SSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANAEKPALKAPPVQA-QGGNQRARVFALTK
        SSSGVKRK     A  S++  +   +   + PVC +C + H+  CW    +CF C KEGH+AR+CP  G +N +    K P   A QGG QRAR+F LT+
Subjt:  SSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANAEKPALKAPPVQA-QGGNQRARVFALTK

Query:  EEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGVVSIAGQ
         +    + VV G ILVLS+ A+ LFDS SSHSFISS FV   +LELE LG+LLSVSTPSGSVL+  QVVK G +S  GQ
Subjt:  EEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGVVSIAGQ

XP_022156067.1 uncharacterized protein LOC111023035 [Momordica charantia]3.7e-3748.54Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +  S+   +   +     P C +C + H+G CW   ++CF C KEGH+AR+CP  G +N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    K P    AQGG QRARVFALT+ +    + VV G ILVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  QVVK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]3.8e-5055.83Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+ EA+ GAL+MDK+V+ K  P     SSSGVKRK P   A L  +AP++Q +   + PVC TC +RH+GQCWT  K CF CG+EGH+AR+CP    AN 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALK-APPVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        ++   +  PPV  QG NQRARVFALT++EA D + VV G +LV  V A+VLFDS SSH+FISS FV Q  LELEPLG+LLSVSTPSGS+L+A Q V+   
Subjt:  EKPALK-APPVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S   Q
Subjt:  VSIAGQ

XP_022156992.1 uncharacterized protein LOC111023821 [Momordica charantia]4.5e-3546.12Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +   ++  +   +     PVC +C + H G CW    +C+ C KEGH+AR+CP  G  N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    + P    AQGG  RARVFALT+ +    + VV+G +LVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  Q+VK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

XP_022158750.1 uncharacterized protein LOC111025215 [Momordica charantia]5.9e-3546.12Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +   ++  +   +     PVC +C + H+G CW   ++C+ C KEGH+AR+CP  G +N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    + P    AQGG  RARVFALT+ +    + VV   +LVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  QVVK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

TrEMBL top hitse value%identityAlignment
A0A6J1D9H1 uncharacterized protein LOC1110181439.8e-3651.4Show/hide
Query:  SSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANAEKPALKAPPVQA-QGGNQRARVFALTK
        SSSGVKRK     A  S++  +   +   + PVC +C + H+  CW    +CF C KEGH+AR+CP  G +N +    K P   A QGG QRAR+F LT+
Subjt:  SSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANAEKPALKAPPVQA-QGGNQRARVFALTK

Query:  EEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGVVSIAGQ
         +    + VV G ILVLS+ A+ LFDS SSHSFISS FV   +LELE LG+LLSVSTPSGSVL+  QVVK G +S  GQ
Subjt:  EEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGVVSIAGQ

A0A6J1DR22 uncharacterized protein LOC1110230351.8e-3748.54Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +  S+   +   +     P C +C + H+G CW   ++CF C KEGH+AR+CP  G +N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    K P    AQGG QRARVFALT+ +    + VV G ILVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  QVVK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

A0A6J1DTE5 uncharacterized protein LOC1110238212.2e-3546.12Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +   ++  +   +     PVC +C + H G CW    +C+ C KEGH+AR+CP  G  N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    + P    AQGG  RARVFALT+ +    + VV+G +LVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  Q+VK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

A0A6J1DUM2 uncharacterized protein LOC1110232471.8e-5055.83Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+ EA+ GAL+MDK+V+ K  P     SSSGVKRK P   A L  +AP++Q +   + PVC TC +RH+GQCWT  K CF CG+EGH+AR+CP    AN 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALK-APPVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        ++   +  PPV  QG NQRARVFALT++EA D + VV G +LV  V A+VLFDS SSH+FISS FV Q  LELEPLG+LLSVSTPSGS+L+A Q V+   
Subjt:  EKPALK-APPVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S   Q
Subjt:  VSIAGQ

A0A6J1DWP4 uncharacterized protein LOC1110252152.9e-3546.12Show/hide
Query:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA
        T+  A+  AL+MDK    + Q      SSSGVKRK     +   ++  +   +     PVC +C + H+G CW   ++C+ C KEGH+AR+CP  G +N 
Subjt:  TFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANA

Query:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV
        +    + P    AQGG  RARVFALT+ +    + VV   +LVLS+ A+ LFDS SSHSFI+S FV   +LELE LG+LLSVSTPSGSVL+  QVVK G 
Subjt:  EKPALKAP-PVQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGV

Query:  VSIAGQ
        +S  GQ
Subjt:  VSIAGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTTGTTGAAGCGCTCTCAGGCGCGTTGATCATGGATAAGAATGTGGCAAGGAAGATGCAACCTCACTGGGGAGAAGCTTCATCGTCTGGTGTTAAAAGGAAGCC
TCCTCCCATGCCCGCACGTCTGTCGACCAAGGCCCCTCGTCAGCAGCAGAGGCCAGCTCCCATCGTCCCTGTGTGCGCTACGTGCAATAGGCGCCATTCTGGTCAATGTT
GGACAAGTGATAAGGTCTGTTTCAATTGCGGTAAAGAAGGACATTATGCCAGGCAGTGTCCCACTAAAGGCGAAGCAAATGCTGAGAAGCCAGCCCTTAAGGCCCCACCA
GTGCAAGCTCAAGGTGGAAATCAGAGGGCGCGTGTCTTTGCCCTCACGAAAGAAGAAGCAAATGATGAGGATGTCGTGGTTATAGGAATTATTTTGGTTCTGAGTGTCCT
CGCCTTTGTTTTGTTTGATTCGGAGTCAAGTCATTCATTTATTTCTTCAGTGTTTGTTAGCCAAGAAAATCTTGAGTTAGAACCGTTAGGTTATCTTCTTTCGGTATCTA
CACCCTCCGGCTCTGTTTTGCTTGCTCAACAAGTAGTCAAGTTCGGAGTAGTCTCGATTGCAGGTCAGGCCAAGGGTTTAAGTTGGGGGAGAGAAAGGGGATGGGTACAT
GATTTAAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTTGTTGAAGCGCTCTCAGGCGCGTTGATCATGGATAAGAATGTGGCAAGGAAGATGCAACCTCACTGGGGAGAAGCTTCATCGTCTGGTGTTAAAAGGAAGCC
TCCTCCCATGCCCGCACGTCTGTCGACCAAGGCCCCTCGTCAGCAGCAGAGGCCAGCTCCCATCGTCCCTGTGTGCGCTACGTGCAATAGGCGCCATTCTGGTCAATGTT
GGACAAGTGATAAGGTCTGTTTCAATTGCGGTAAAGAAGGACATTATGCCAGGCAGTGTCCCACTAAAGGCGAAGCAAATGCTGAGAAGCCAGCCCTTAAGGCCCCACCA
GTGCAAGCTCAAGGTGGAAATCAGAGGGCGCGTGTCTTTGCCCTCACGAAAGAAGAAGCAAATGATGAGGATGTCGTGGTTATAGGAATTATTTTGGTTCTGAGTGTCCT
CGCCTTTGTTTTGTTTGATTCGGAGTCAAGTCATTCATTTATTTCTTCAGTGTTTGTTAGCCAAGAAAATCTTGAGTTAGAACCGTTAGGTTATCTTCTTTCGGTATCTA
CACCCTCCGGCTCTGTTTTGCTTGCTCAACAAGTAGTCAAGTTCGGAGTAGTCTCGATTGCAGGTCAGGCCAAGGGTTTAAGTTGGGGGAGAGAAAGGGGATGGGTACAT
GATTTAAAAGCTTGA
Protein sequenceShow/hide protein sequence
MTFVEALSGALIMDKNVARKMQPHWGEASSSGVKRKPPPMPARLSTKAPRQQQRPAPIVPVCATCNRRHSGQCWTSDKVCFNCGKEGHYARQCPTKGEANAEKPALKAPP
VQAQGGNQRARVFALTKEEANDEDVVVIGIILVLSVLAFVLFDSESSHSFISSVFVSQENLELEPLGYLLSVSTPSGSVLLAQQVVKFGVVSIAGQAKGLSWGRERGWVH
DLKA