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Lag0010627 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010627
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:2487987..2489105
RNA-Seq ExpressionLag0010627
SyntenyLag0010627
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]4.6e-2928.38Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F + S +KIN  K+  LG+    +  + +A  +GC++G WP  YLG PL GNPR  NFW PV++K++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN
        G+  N     +    S ++PWR I K            VG G++  FWED WL    LK  +P L++LS++K   I    N+ +      F  R+N
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN

CAN65404.1 hypothetical protein VITISV_036315 [Vitis vinifera]6.1e-2934.84Show/hide
Query:  VIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISKGELGIYDIHKKNVSLS
        V+  FE AS L+IN  K+  + +G + +    LA   GCKIG  PT YLG PL  + +  + W  V E+++KRL  W   +  KG LG+  I   N +L 
Subjt:  VIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISKGELGIYDIHKKNVSLS

Query:  AKWTCRFYNDQKALWRKFIATKYGVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIV
         KW  RF  ++  LWR  I  KYG  +   K  +   +     W+ I K     + +I  KVGKG    FW D W G++ L   +P L+ ++  K A + 
Subjt:  AKWTCRFYNDQKALWRKFIATKYGVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIV

Query:  ELWNHTD--EAWKKKFHRRQN
        E+W+H++    W  +FHR  N
Subjt:  ELWNHTD--EAWKKKFHRRQN

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.2e-3027.87Show/hide
Query:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------
        ++ NL  ++  FE+AS L IN  K+    +   T +A  +A  +G   G+ PTSYLG PL G P   NFW  V++KIQK+L NW  S +S          
Subjt:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------

Query:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP
                                                              KG LGI+ ++  N +L  KW  +F  ++  LW++ I +KY   K  
Subjt:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP

Query:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR
        +       SS+  PW+++ +     Y +I  KV  G++  FW D W G+  L    P LF LS  K+  + E WN +   W    +R
Subjt:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.6e-2926.83Show/hide
Query:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------
        ++ NL  ++  FE+AS L IN  K+    +   T +A+ +   +G   G  PT+YLG PL G P   NFW  +++KIQK+L +W  S +S          
Subjt:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------

Query:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP
                                                              KG LGI+ +H  N +L  KW  +F  +++ LW++ I +KY   K  
Subjt:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP

Query:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR
            +   SS+  PW+++       Y +I  KV  G++  FW D W G+  L    P LF LS  K+  + +LWN + + W    +R
Subjt:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]2.1e-2928.72Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F N S +KIN  K+  LG+    +  + +A  +GC++G WP  YLG PL GNPR  NFW PV +K++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN
        G+  N     +    S ++PWR I K  +         VG G++  FWED+WL    LK  +P L +LS++K   I    N+ +      F  R+N
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein3.5e-3027.87Show/hide
Query:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------
        ++ NL  ++  FE+AS L IN  K+    +   T +A  +A  +G   G+ PTSYLG PL G P   NFW  V++KIQK+L NW  S +S          
Subjt:  HIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNIS----------

Query:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP
                                                              KG LGI+ ++  N +L  KW  +F  ++  LW++ I +KY   K  
Subjt:  ------------------------------------------------------KGELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNP

Query:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR
        +       SS+  PW+++ +     Y +I  KV  G++  FW D W G+  L    P LF LS  K+  + E WN +   W    +R
Subjt:  NKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHR

A0A5E4FU33 zf-RVT domain-containing protein (Fragment)1.0e-2928.72Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F N S +KIN  K+  LG+    +  + +A  +GC++G WP  YLG PL GNPR  NFW PV +K++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN
        G+  N     +    S ++PWR I K  +         VG G++  FWED+WL    LK  +P L +LS++K   I    N+ +      F  R+N
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALIVELWNHTDEAWKKKFHRRQN

M5VS59 Reverse transcriptase domain-containing protein (Fragment)1.7e-2929.35Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F + S +KIN  K+  LG+   T+  + +A  +GC++G WP  YLG PL GNPR  NFW PV++K++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI
        G+  N     +    S ++PWR I K  +         VG G++  FWED+WL    LK  +P L +LS++K   I
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI

M5WPQ5 Reverse transcriptase domain-containing protein7.7e-3029.71Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F + S +KIN  K+  LG+   T+  + +A  +GC++G WP  YLG PL GNPR  NFW PV+EK++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI
        G+  N     +    S ++PWR I K  +         VG G++  FWED+WL    LK  +P L +LS++K   I
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)7.7e-3029.71Show/hide
Query:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---
        E +W+    NL  +++ F + S +KIN  K+  LG+   T+  + +A  +GC++G WP  YLG PL GNPR  NFW PV+EK++KRL  W  + +SK   
Subjt:  EGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISK---

Query:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY
                                                                     G LGI  + ++N +L AKW  RF  +  +LW + I +KY
Subjt:  -------------------------------------------------------------GELGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKY

Query:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI
        G+  N     +    S ++PWR I K  +         VG G++  FWED+WL    LK  +P L +LS++K   I
Subjt:  GVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKEALI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATTGAGGCTAAAAGAAATGGCTCCATTGAAGGCTTTTGGATAGCACACATTGGTAACCTCTTCAATGTTATCCGCACTTTTGAGAATGCATCAAGGCTGAAAAT
AAACTACAAGAAGACTGAATTTTTGGGTCTTGGCACAGACACGCAGCAGGCTTCGTTTTTGGCAACACTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAG
GCCGCCCCCTTAACGGCAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATACAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGAA
TTGGGTATTTATGACATACACAAAAAGAACGTCTCCCTTTCGGCCAAATGGACATGCAGATTCTACAACGACCAGAAGGCATTATGGAGGAAGTTCATTGCCACCAAATA
TGGAGTGGCCAAAAATCCGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACCCATGGAGATCCATCTACAAGATGCAACACCTCATTTACAACTCCATAGATT
GCAAAGTTGGGAAAGGAGACGAAACATTATTTTGGGAAGACGTGTGGCTCGGATCTGATGCATTAAAAACAAAATATCCCTCCCTATTCAACCTCTCTCAAAAAAAGGAG
GCTCTCATTGTCGAATTATGGAATCATACGGATGAGGCTTGGAAGAAGAAATTTCACCGAAGACAAAATTCTGGAATGGGCTACTTTATCGCACCATCTTTCCTCCTTCT
CCCTAAAAGAGGAGGACGATGCATGGATATGGAAGCTTGGAAACAATGGTTCCTTCTCCACCGGCCTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTATTGAGGCTAAAAGAAATGGCTCCATTGAAGGCTTTTGGATAGCACACATTGGTAACCTCTTCAATGTTATCCGCACTTTTGAGAATGCATCAAGGCTGAAAAT
AAACTACAAGAAGACTGAATTTTTGGGTCTTGGCACAGACACGCAGCAGGCTTCGTTTTTGGCAACACTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAG
GCCGCCCCCTTAACGGCAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATACAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGAA
TTGGGTATTTATGACATACACAAAAAGAACGTCTCCCTTTCGGCCAAATGGACATGCAGATTCTACAACGACCAGAAGGCATTATGGAGGAAGTTCATTGCCACCAAATA
TGGAGTGGCCAAAAATCCGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACCCATGGAGATCCATCTACAAGATGCAACACCTCATTTACAACTCCATAGATT
GCAAAGTTGGGAAAGGAGACGAAACATTATTTTGGGAAGACGTGTGGCTCGGATCTGATGCATTAAAAACAAAATATCCCTCCCTATTCAACCTCTCTCAAAAAAAGGAG
GCTCTCATTGTCGAATTATGGAATCATACGGATGAGGCTTGGAAGAAGAAATTTCACCGAAGACAAAATTCTGGAATGGGCTACTTTATCGCACCATCTTTCCTCCTTCT
CCCTAAAAGAGGAGGACGATGCATGGATATGGAAGCTTGGAAACAATGGTTCCTTCTCCACCGGCCTCTTTAG
Protein sequenceShow/hide protein sequence
MLIEAKRNGSIEGFWIAHIGNLFNVIRTFENASRLKINYKKTEFLGLGTDTQQASFLATLFGCKIGNWPTSYLGRPLNGNPRKDNFWTPVIEKIQKRLHNWGSSNISKGE
LGIYDIHKKNVSLSAKWTCRFYNDQKALWRKFIATKYGVAKNPNKLGKHSISSSKDPWRSIYKMQHLIYNSIDCKVGKGDETLFWEDVWLGSDALKTKYPSLFNLSQKKE
ALIVELWNHTDEAWKKKFHRRQNSGMGYFIAPSFLLLPKRGGRCMDMEAWKQWFLLHRPL