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Lag0010630 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010630
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:2520757..2521511
RNA-Seq ExpressionLag0010630
SyntenyLag0010630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG49522.1 hypothetical protein EZV62_025397 [Acer yangbiense]7.5e-0846.84Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP
        IQI+KVPL  ++S + R LG  +G V+ +   G GD +G  + VR+V+DVTKPLRR++R+ V  D      L++YERLP
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP

TXG50019.1 hypothetical protein EZV62_025894 [Acer yangbiense]8.8e-0948.1Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP
        IQI+KVPL  ++S + R LG  +G V+ +   G GD +G  +RVR+V+DVTKPLRR++R+ V  D      L++YERLP
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP

TXG52368.1 hypothetical protein EZV62_021537 [Acer yangbiense]6.3e-0733.33Show/hide
Query:  WQNMSLTEEEAVAIPVPASIPLLH-ESTIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNF-LMCL
        + N+ +  E+ V +    S+   H +  +QI+K+P+  ++  + R LG  +G V  + G   GD +G  MRVRI +D+TKPL+R +R+ +  D    + +
Subjt:  WQNMSLTEEEAVAIPVPASIPLLH-ESTIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNF-LMCL

Query:  IQYERLPYFFF
        ++YERLP   F
Subjt:  IQYERLPYFFF

XP_021802783.1 uncharacterized protein LOC110746864, partial [Prunus avium]6.3e-0738.24Show/hide
Query:  EAVAIPVPASIPLLHES-TIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSS---DNFLMCLIQYERLP
        E   + VPA IPL  ++  ++I+ +P  FL+  M   LGG +G V  V  + HG  +G  +RVR+V+D++ PLRR +++++ S      L  L+QYERLP
Subjt:  EAVAIPVPASIPLLHES-TIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSS---DNFLMCLIQYERLP

Query:  YF
         +
Subjt:  YF

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.0e-0943.9Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNFLMCLIQYERLPYFFF
        IQI+ +P   +S+ MA  LG  LG VE + G+G   W G  +RVR+ IDV+KPLRR ++L+ S    + C ++YE+LP F +
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNFLMCLIQYERLPYFFF

TrEMBL top hitse value%identityAlignment
A0A5C7GYX1 Uncharacterized protein3.6e-0846.84Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP
        IQI+KVPL  ++S + R LG  +G V+ +   G GD +G  + VR+V+DVTKPLRR++R+ V  D      L++YERLP
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP

A0A5C7GZQ4 CCHC-type domain-containing protein4.3e-0948.1Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP
        IQI+KVPL  ++S + R LG  +G V+ +   G GD +G  +RVR+V+DVTKPLRR++R+ V  D      L++YERLP
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSD-NFLMCLIQYERLP

A0A5C7H5N9 Uncharacterized protein3.1e-0733.33Show/hide
Query:  WQNMSLTEEEAVAIPVPASIPLLH-ESTIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNF-LMCL
        + N+ +  E+ V +    S+   H +  +QI+K+P+  ++  + R LG  +G V  + G   GD +G  MRVRI +D+TKPL+R +R+ +  D    + +
Subjt:  WQNMSLTEEEAVAIPVPASIPLLH-ESTIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNF-LMCL

Query:  IQYERLPYFFF
        ++YERLP   F
Subjt:  IQYERLPYFFF

A0A6J1D765 uncharacterized protein LOC1110179021.5e-0943.9Show/hide
Query:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNFLMCLIQYERLPYFFF
        IQI+ +P   +S+ MA  LG  LG VE + G+G   W G  +RVR+ IDV+KPLRR ++L+ S    + C ++YE+LP F +
Subjt:  IQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNFLMCLIQYERLPYFFF

A0A6P5RLJ8 uncharacterized protein LOC1107468643.1e-0738.24Show/hide
Query:  EAVAIPVPASIPLLHES-TIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSS---DNFLMCLIQYERLP
        E   + VPA IPL  ++  ++I+ +P  FL+  M   LGG +G V  V  + HG  +G  +RVR+V+D++ PLRR +++++ S      L  L+QYERLP
Subjt:  EAVAIPVPASIPLLHES-TIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSS---DNFLMCLIQYERLP

Query:  YF
         +
Subjt:  YF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACTCACAGAACAATGGCAAAATATGTCGTTGACGGAGGAGGAAGCAGTGGCGATACCTGTGCCAGCGTCTATTCCTCTACTACATGAATCAACGATTCAGAT
AAACAAGGTTCCTCTGAATTTTCTTTCTTCTGCAATGGCTCGAACGTTAGGCGGTGCTCTGGGTGCTGTTGAGGGAGTTTTTGGGGAAGGACATGGGGACTGGATAGGAT
CAGTTATGAGAGTTCGGATTGTCATTGATGTTACGAAGCCTTTGCGGCGTGTTGTCCGGCTACAGGTTAGTAGTGATAATTTTTTGATGTGCCTCATTCAGTATGAAAGA
TTACCATATTTTTTTTTTGTTGTGGTTGTATTGGTCAATCTCATCGGGAATGTCTTGTTCTGGATCCGAATATTGGTGTCAATGGCTTGTTTCCTTATGGTGATTGGTTA
CGTGCTACACCACTTCGTCGTCCGAGACCGAGAGGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAACTCACAGAACAATGGCAAAATATGTCGTTGACGGAGGAGGAAGCAGTGGCGATACCTGTGCCAGCGTCTATTCCTCTACTACATGAATCAACGATTCAGAT
AAACAAGGTTCCTCTGAATTTTCTTTCTTCTGCAATGGCTCGAACGTTAGGCGGTGCTCTGGGTGCTGTTGAGGGAGTTTTTGGGGAAGGACATGGGGACTGGATAGGAT
CAGTTATGAGAGTTCGGATTGTCATTGATGTTACGAAGCCTTTGCGGCGTGTTGTCCGGCTACAGGTTAGTAGTGATAATTTTTTGATGTGCCTCATTCAGTATGAAAGA
TTACCATATTTTTTTTTTGTTGTGGTTGTATTGGTCAATCTCATCGGGAATGTCTTGTTCTGGATCCGAATATTGGTGTCAATGGCTTGTTTCCTTATGGTGATTGGTTA
CGTGCTACACCACTTCGTCGTCCGAGACCGAGAGGGGTAG
Protein sequenceShow/hide protein sequence
MDELTEQWQNMSLTEEEAVAIPVPASIPLLHESTIQINKVPLNFLSSAMARTLGGALGAVEGVFGEGHGDWIGSVMRVRIVIDVTKPLRRVVRLQVSSDNFLMCLIQYER
LPYFFFVVVVLVNLIGNVLFWIRILVSMACFLMVIGYVLHHFVVRDREG