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Lag0010633 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010633
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:2574048..2578369
RNA-Seq ExpressionLag0010633
SyntenyLag0010633
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067918.1 hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]8.6e-1756.25Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        L RVNT+D+L RK T  VGPFCC+LC+KA EDLDH+  +CQ+AR+VWS F     +     R  R  I+EFLLHLSF+D+
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

TYK04295.1 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucumis melo var. makuwa]1.5e-1656.25Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        L RVNT+D+L RK T  VGPFCC+LC+KA EDLDH+  +CQ+AR+VWS F     +     R  R  I+EFLLHLSF+D+
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

TYK06215.1 peroxin Pex14 isoform X3 [Cucumis melo var. makuwa]1.3e-1251.81Show/hide
Query:  RDFLVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        ++ L +VNTID+L R+ TSL GPFCC L +KA EDLDH  W+CQ+AR+VWS F     I    +   R  I+EFLL   F+DK
Subjt:  RDFLVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

TYK11201.1 SIL1 [Cucumis melo var. makuwa]9.9e-1351.95Show/hide
Query:  VNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        +NTID+L + MT LVGPF C LC+KA EDLD++ W+CQ  R+VW+ F   F       R  R  I+EFLLH  FR+K
Subjt:  VNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]3.2e-1150.68Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLL
        L R N +D+L R+        CCILCRKA EDLDH+LW+CQ+AR+VW  F   F ++   LR  R+ I+EFLL
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLL

TrEMBL top hitse value%identityAlignment
A0A5A7VJE4 zf-RVT domain-containing protein4.2e-1756.25Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        L RVNT+D+L RK T  VGPFCC+LC+KA EDLDH+  +CQ+AR+VWS F     +     R  R  I+EFLLHLSF+D+
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

A0A5D3BYR2 Serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X27.1e-1756.25Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        L RVNT+D+L RK T  VGPFCC+LC+KA EDLDH+  +CQ+AR+VWS F     +     R  R  I+EFLLHLSF+D+
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

A0A5D3C4A7 Peroxin Pex14 isoform X36.2e-1351.81Show/hide
Query:  RDFLVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        ++ L +VNTID+L R+ TSL GPFCC L +KA EDLDH  W+CQ+AR+VWS F     I    +   R  I+EFLL   F+DK
Subjt:  RDFLVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

A0A5D3CHC7 SIL14.8e-1351.95Show/hide
Query:  VNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK
        +NTID+L + MT LVGPF C LC+KA EDLD++ W+CQ  R+VW+ F   F       R  R  I+EFLLH  FR+K
Subjt:  VNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDK

A0A5D3E255 Reverse transcriptase1.5e-1150.68Show/hide
Query:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLL
        L R N +D+L R+        CCILCRKA EDLDH+LW+CQ+AR+VW  F   F ++   LR  R+ I+EFLL
Subjt:  LVRVNTIDKLSRKMTSLVGPFCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCTACCCTCTCTATGGCACGAGAGGTACTTCTGTTTTCTGGTTGGACCTCAAACAAGTTATTCATTAGAGGAGCACTGAGACTTAAGGATAAAGAGGTAGCCCA
GAGCAACATTAAATATTGTTATACTGCTGTGATCTGTTTACCGTCGTATTGGTATTCCAATCGACATTTAATTCGATTAGGTCCTCTGATAAATTCTGCTGCGTTAGGGC
TTTTATCCCCGCAGTTCGTTGTTGGAGTCTTAACCCTGCTGAGGGATTTTCTTGTCAGAGTTAATACAATCGATAAGCTCTCGAGGAAGATGACTTCATTGGTTGGCCCG
TTCTGTTGCATCTTATGTCGGAAGGCAGGGGAAGATTTGGACCATATCCTGTGGAATTGCCAGTTTGCCCGTTCAGTGTGGAGTTTATTTTTTGACGCGTTCTGGATTCA
AGCAAGACGATTAAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGTCGTTTCGCGATAAGGGGAGAACCAGAGAATTCAGAGAGACTCCACCAAGTCTGA
AGACCGAAGACTCTCTGCAATCCATAAGTCCAAGTGTTGAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTTCTTGAAGACCCAACACTCTTCAAGACTT
CAACACTCCTTGAAGATCAAAGACTATTCAGGACATCAACACTTCTTGAAGACTGAAGACTCCTTCAAGACTGAAGACTTCAAGCTCCAAGAATCCATTGAAGCTTCAGA
CTCGGGATCAAGCGTTCCAGCCCTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCTACCCTCTCTATGGCACGAGAGGTACTTCTGTTTTCTGGTTGGACCTCAAACAAGTTATTCATTAGAGGAGCACTGAGACTTAAGGATAAAGAGGTAGCCCA
GAGCAACATTAAATATTGTTATACTGCTGTGATCTGTTTACCGTCGTATTGGTATTCCAATCGACATTTAATTCGATTAGGTCCTCTGATAAATTCTGCTGCGTTAGGGC
TTTTATCCCCGCAGTTCGTTGTTGGAGTCTTAACCCTGCTGAGGGATTTTCTTGTCAGAGTTAATACAATCGATAAGCTCTCGAGGAAGATGACTTCATTGGTTGGCCCG
TTCTGTTGCATCTTATGTCGGAAGGCAGGGGAAGATTTGGACCATATCCTGTGGAATTGCCAGTTTGCCCGTTCAGTGTGGAGTTTATTTTTTGACGCGTTCTGGATTCA
AGCAAGACGATTAAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGTCGTTTCGCGATAAGGGGAGAACCAGAGAATTCAGAGAGACTCCACCAAGTCTGA
AGACCGAAGACTCTCTGCAATCCATAAGTCCAAGTGTTGAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTTCTTGAAGACCCAACACTCTTCAAGACTT
CAACACTCCTTGAAGATCAAAGACTATTCAGGACATCAACACTTCTTGAAGACTGAAGACTCCTTCAAGACTGAAGACTTCAAGCTCCAAGAATCCATTGAAGCTTCAGA
CTCGGGATCAAGCGTTCCAGCCCTCGAGTGA
Protein sequenceShow/hide protein sequence
MGPTLSMAREVLLFSGWTSNKLFIRGALRLKDKEVAQSNIKYCYTAVICLPSYWYSNRHLIRLGPLINSAALGLLSPQFVVGVLTLLRDFLVRVNTIDKLSRKMTSLVGP
FCCILCRKAGEDLDHILWNCQFARSVWSLFFDAFWIQARRLRDYREMIQEFLLHLSFRDKGRTREFRETPPSLKTEDSLQSISPSVEHFLKTKHSSRLQHFLKTQHSSRL
QHSLKIKDYSGHQHFLKTEDSFKTEDFKLQESIEASDSGSSVPALE