; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010646 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010646
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr1:2867901..2868308
RNA-Seq ExpressionLag0010646
SyntenyLag0010646
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.5e-0641.49Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSI-PPYYEVG--PSSSH-EAGPSLSYAH
        MY + + PPP  R R R +E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y+ + +   YY+ G  PSS + + GPS  Y H
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSI-PPYYEVG--PSSSH-EAGPSLSYAH

KAA0049532.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.0e-0938.71Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYE--VGPSSSH-EAGPSLSYAH------
        MY +P+ PP   R R R +E ++    DEV+HNVE+VPP TQTQ      +P++++PT G  Y  + +   YY+  +GP SS+ + GPS SY H      
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYE--VGPSSSH-EAGPSLSYAH------

Query:  --------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                 E P +  +  E Q+E   Q++++Q   + R RQP RNRRH  CGTH
Subjt:  --------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-0734.84Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT---------PGMQYFQTSIPP---YYEVGPSSSHEAGPSLSY
        MY +P+ PPP  R   R +E ++    D+V+HNVE+VP  TQTQ      +P+ ++PT          G+ Y+   + P   Y +V PS+S+  G S  Y
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT---------PGMQYFQTSIPP---YYEVGPSSSHEAGPSLSY

Query:  A-------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                H    +     E Q+E   Q++++Q   + R RQP RNRR P CGTH
Subjt:  A-------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]4.1e-0738.46Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT--PGMQYFQTSIPPYYE--VGPSSSH-EAGPSLSYAH-----
        MY +P+ PPP  R   R +E ++    D+V+HNVE+VP  TQTQ      +P+ ++PT   G   F+  I  YY+  VGPSSS+ +  PS SY H     
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT--PGMQYFQTSIPPYYE--VGPSSSH-EAGPSLSYAH-----

Query:  ---------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                  E P +  +  E Q+E   Q++++Q   + R RQP RNRR P CGTH
Subjt:  ---------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.7e-0836.77Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIP-PYYE--VGPSSSH-EAGPSLSYA-------
        +Y +P+ PPP  R R R +E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y  + +   YY+  VGP SS+ + GPS SY        
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIP-PYYE--VGPSSSH-EAGPSLSYA-------

Query:  --------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                H    +     E Q+E   Q++++Q   + R RQP RNR+   CGTH
Subjt:  --------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.8e-0834.84Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT---------PGMQYFQTSIPP---YYEVGPSSSHEAGPSLSY
        MY +P+ PPP  R   R +E ++    D+V+HNVE+VP  TQTQ      +P+ ++PT          G+ Y+   + P   Y +V PS+S+  G S  Y
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT---------PGMQYFQTSIPP---YYEVGPSSSHEAGPSLSY

Query:  A-------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                H    +     E Q+E   Q++++Q   + R RQP RNRR P CGTH
Subjt:  A-------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X22.0e-0738.46Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT--PGMQYFQTSIPPYYE--VGPSSSH-EAGPSLSYAH-----
        MY +P+ PPP  R   R +E ++    D+V+HNVE+VP  TQTQ      +P+ ++PT   G   F+  I  YY+  VGPSSS+ +  PS SY H     
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPT--PGMQYFQTSIPPYYE--VGPSSSH-EAGPSLSYAH-----

Query:  ---------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                  E P +  +  E Q+E   Q++++Q   + R RQP RNRR P CGTH
Subjt:  ---------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

A0A5D3CXX3 GATA zinc finger domain-containing protein 10-like isoform X29.5e-1038.71Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYE--VGPSSSH-EAGPSLSYAH------
        MY +P+ PP   R R R +E ++    DEV+HNVE+VPP TQTQ      +P++++PT G  Y  + +   YY+  +GP SS+ + GPS SY H      
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYE--VGPSSSH-EAGPSLSYAH------

Query:  --------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                 E P +  +  E Q+E   Q++++Q   + R RQP RNRRH  CGTH
Subjt:  --------REQPEEQKE-HEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

A0A5D3CZG9 GATA zinc finger domain-containing protein 10-like isoform X23.2e-0537.29Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYEVGPSSSH---EAGPSLSYAHREQPEE
        MY +P+ P P  R R R +E ++    DEV+HNVE+VPP TQTQ       P+ ++PT G  Y  + +   YY+VG  SS      GPS SY H      
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPP-YYEVGPSSSH---EAGPSLSYAHREQPEE

Query:  QKEHEVQKEQAVQDEQDQ
         + +E    +A+ D  D+
Subjt:  QKEHEVQKEQAVQDEQDQ

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-0836.77Show/hide
Query:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIP-PYYE--VGPSSSH-EAGPSLSYA-------
        +Y +P+ PPP  R R R +E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y  + +   YY+  VGP SS+ + GPS SY        
Subjt:  MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIP-PYYE--VGPSSSH-EAGPSLSYA-------

Query:  --------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH
                H    +     E Q+E   Q++++Q   + R RQP RNR+   CGTH
Subjt:  --------HREQPEEQKEHEVQKEQAVQDEQDQ-TPRGRHRQPPRNRRHPHCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCGCATACCTGTGCCACCTCCCCCGGGTCCTAGGCGTAGACAACGTGCTCAAGAGGAGGACATTCTCGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGT
ACCTCCTCTCACTCAGACACAAGATAGTGGTACTCCTTCCACTCCACTTGTTTTGATCCCAACTCCTGGTATGCAGTATTTTCAAACTTCGATTCCACCATACTATGAGG
TTGGTCCATCATCATCACATGAGGCAGGTCCCTCATTGTCATATGCTCATAGAGAGCAACCAGAAGAACAAAAGGAACATGAGGTACAAAAGGAGCAAGCGGTACAAGAT
GAACAAGATCAGACACCAAGGGGACGTCATCGTCAACCACCTCGTAATCGACGACATCCACATTGTGGAACTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACCGCATACCTGTGCCACCTCCCCCGGGTCCTAGGCGTAGACAACGTGCTCAAGAGGAGGACATTCTCGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGT
ACCTCCTCTCACTCAGACACAAGATAGTGGTACTCCTTCCACTCCACTTGTTTTGATCCCAACTCCTGGTATGCAGTATTTTCAAACTTCGATTCCACCATACTATGAGG
TTGGTCCATCATCATCACATGAGGCAGGTCCCTCATTGTCATATGCTCATAGAGAGCAACCAGAAGAACAAAAGGAACATGAGGTACAAAAGGAGCAAGCGGTACAAGAT
GAACAAGATCAGACACCAAGGGGACGTCATCGTCAACCACCTCGTAATCGACGACATCCACATTGTGGAACTCATTAG
Protein sequenceShow/hide protein sequence
MYRIPVPPPPGPRRRQRAQEEDILVVHDEVHHNVEDVPPLTQTQDSGTPSTPLVLIPTPGMQYFQTSIPPYYEVGPSSSHEAGPSLSYAHREQPEEQKEHEVQKEQAVQD
EQDQTPRGRHRQPPRNRRHPHCGTH