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Lag0010653 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010653
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:3125294..3125719
RNA-Seq ExpressionLag0010653
SyntenyLag0010653
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.6e-1744.35Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + + KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DH H+T +C  L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI  GYLKE+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.3e-1945.97Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + D KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI++  LL  P ++K++   R K +YCLFHRDH H+T +C  L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI+ GYLKE+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.5e-1545.86Show/hide
Query:  MSAEELLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGR-PDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        MSAEE    KK E E KR           KR+++ EK        + R   Q D  +KFEKYT  +VP EQ+LMEI++  LL  P  +K+ P+ R K +Y
Subjt:  MSAEELLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGR-PDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEF
        CLFHRDH H+T +C  LK+E+E LI+ GYLKE+
Subjt:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEF

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]6.0e-1744.35Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + D KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T +   L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI+ GYL+E+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]1.1e-1542.5Show/hide
Query:  KRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGRPDQGDYLK-KFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQ
        KR ++SD     +KR+  +E+ + +    R        L+ +F +YT +++P+EQ+LM+IRN +LL  P+ +K  P+ RD+S+YC +HRDHRH+  +C  
Subjt:  KRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGRPDQGDYLK-KFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQ

Query:  LKDEIEALIQNGYLKEFTIK
        LK+EI++LIQ GYLKEF  K
Subjt:  LKDEIEALIQNGYLKEFTIK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.2e-1744.35Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + + KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DH H+T +C  L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI  GYLKE+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

A0A6J1DWY0 uncharacterized protein LOC1110252934.0e-1945.97Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + D KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI++  LL  P ++K++   R K +YCLFHRDH H+T +C  L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI+ GYLKE+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257852.9e-1744.35Show/hide
Query:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL
        YS  + D KR   KR+++ +K +G     R R  Q D  +KFEKYT  +VP EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T +   L
Subjt:  YSSSDRDSKR--DKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHSTGNCIQL

Query:  KDEIEALIQNGYLKEFTIKAEADQ
        K+E+E LI+ GYL+E+  + +A Q
Subjt:  KDEIEALIQNGYLKEFTIKAEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256121.2e-1545.86Show/hide
Query:  MSAEELLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGR-PDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        MSAEE    KK E E KR           KR+++ EK        + R   Q D  +KFEKYT  +VP EQ+LMEI++  LL  P  +K+ P+ R K +Y
Subjt:  MSAEELLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGR-PDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEF
        CLFHRDH H+T +C  LK+E+E LI+ GYLKE+
Subjt:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEF

A0A7N2N9G0 Reverse transcriptase4.3e-1338.57Show/hide
Query:  MSAEE-LLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        M+AE+ LL  ++  R+++R   + +D  R K +  D +   RP     RP  G    +F  +T ++ P +Q+LM+I++   L  P KLKS+P+ R + +Y
Subjt:  MSAEE-LLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEFTIKAEAD
        C FHRDH H T +C  LK +IEALI+ G L+ F  K  AD
Subjt:  CLFHRDHRHSTGNCIQLKDEIEALIQNGYLKEFTIKAEAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCAGAGGAGCTGCTCAAGTCAAAGAAGTCAGAACGAGAACAGAAGAGGTATTCTTCATCTGACCGCGACAGTAAGAGGGACAAGAGGCAACAAACAGATGAAAA
AGGTCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAATTTGAAAAGTACACCCTAATTTCAGTCCCACAGGAGCAGATCTTGATGG
AGATACGGAATACAAACCTACTCAACGCGCCCAGGAAGCTGAAGTCAAATCCTGACAACAGAGACAAAAGCCAGTATTGCCTCTTCCATCGAGATCACAGACATTCAACC
GGGAACTGCATCCAATTAAAGGACGAAATTGAAGCACTGATTCAGAACGGATACCTGAAGGAGTTCACCATAAAGGCCGAGGCCGACCAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCAGAGGAGCTGCTCAAGTCAAAGAAGTCAGAACGAGAACAGAAGAGGTATTCTTCATCTGACCGCGACAGTAAGAGGGACAAGAGGCAACAAACAGATGAAAA
AGGTCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAATTTGAAAAGTACACCCTAATTTCAGTCCCACAGGAGCAGATCTTGATGG
AGATACGGAATACAAACCTACTCAACGCGCCCAGGAAGCTGAAGTCAAATCCTGACAACAGAGACAAAAGCCAGTATTGCCTCTTCCATCGAGATCACAGACATTCAACC
GGGAACTGCATCCAATTAAAGGACGAAATTGAAGCACTGATTCAGAACGGATACCTGAAGGAGTTCACCATAAAGGCCGAGGCCGACCAGAGATGA
Protein sequenceShow/hide protein sequence
MSAEELLKSKKSEREQKRYSSSDRDSKRDKRQQTDEKGRGRPDHGRGRPDQGDYLKKFEKYTLISVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHRHST
GNCIQLKDEIEALIQNGYLKEFTIKAEADQR