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Lag0010659 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010659
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein DEK
Genome locationchr1:3271559..3274432
RNA-Seq ExpressionLag0010659
SyntenyLag0010659
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR044198 - Protein DEK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587400.1 Protein DEK, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSGKVVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

XP_022135017.1 protein DEK [Momordica charantia]1.2e-1592.45Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEE+S KLLEFLESPHATTDVLL DKEQKGKKRRRVSSGK+VGSGESAEVSAK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

XP_022921407.1 DNA ligase 1 [Cucurbita moschata]3.0e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DK+QKGKKRRR SSGK VGSGESAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

XP_022933522.1 protein DEK-like [Cucurbita moschata]2.3e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSGKVVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

XP_023531146.1 protein DEK-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSGKVVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

TrEMBL top hitse value%identityAlignment
A0A6J1C1G8 protein DEK5.8e-1692.45Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEE+S KLLEFLESPHATTDVLL DKEQKGKKRRRVSSGK+VGSGESAEVSAK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

A0A6J1E0D6 DNA ligase 11.4e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DK+QKGKKRRR SSGK VGSGESAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

A0A6J1F002 protein DEK-like1.1e-1488.68Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSGKVVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

A0A6J1L0R9 protein DEK-like isoform X22.4e-1486.79Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSG+VVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

A0A6J1L7V1 protein DEK-like isoform X12.4e-1486.79Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEELS KLLEFLESPHATTDVLL DKEQKG+KRRR SSG+VVGSG+SAEV AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G48710.1 DEK domain-containing chromatin associated protein8.3e-0750.82Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAKIFPQIRSQ
        KEEL+ ++LEFL  P AT D+LL D E++ KKR++ S+ K V SGES+ V AK   Q + Q
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAKIFPQIRSQ

AT5G55660.1 DEK domain-containing chromatin associated protein4.6e-0545.28Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KE++  KL+EFLE PHATTDVL+ +KE+  K++R            S++ SAK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

AT5G63550.1 DEK domain-containing chromatin associated protein3.5e-0549.06Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEEL+ K+LEFLESP  T DV++ D+E+  K++     GK   SGES++  AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK

AT5G63550.2 DEK domain-containing chromatin associated protein5.4e-0652.83Show/hide
Query:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK
        KEEL+ K+LEFLESP  T DV++ D+E++ KKR+  S+ K   SGES++  AK
Subjt:  KEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCTTGGCAGGAAAAGCAAAGGTCAAAGGAGGAACTCTCGGAAAAGTTATTAGAATTTTTGGAGTCACCACATGCTACAACGGATGTTTTACTGGTTGACAAGGA
GCAGAAAGGCAAAAAGCGACGGAGGGTCAGTTCAGGCAAGGTAGTTGGTTCTGGAGAATCTGCAGAAGTGTCTGCTAAGATTTTCCCTCAAATTCGCTCTCAAACAGCTT
CCATTTCAATGATTTACAGGCTGTTGAAGTTGTGGGACCACTACGACAATGATTACCTTCCTTCTGAGTATCAGCTTGATATAACTTCTATCAAAATCACTGACGATATG
TGTACTTATTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTCTTGGCAGGAAAAGCAAAGGTCAAAGGAGGAACTCTCGGAAAAGTTATTAGAATTTTTGGAGTCACCACATGCTACAACGGATGTTTTACTGGTTGACAAGGA
GCAGAAAGGCAAAAAGCGACGGAGGGTCAGTTCAGGCAAGGTAGTTGGTTCTGGAGAATCTGCAGAAGTGTCTGCTAAGATTTTCCCTCAAATTCGCTCTCAAACAGCTT
CCATTTCAATGATTTACAGGCTGTTGAAGTTGTGGGACCACTACGACAATGATTACCTTCCTTCTGAGTATCAGCTTGATATAACTTCTATCAAAATCACTGACGATATG
TGTACTTATTTTGTTTAG
Protein sequenceShow/hide protein sequence
MCSWQEKQRSKEELSEKLLEFLESPHATTDVLLVDKEQKGKKRRRVSSGKVVGSGESAEVSAKIFPQIRSQTASISMIYRLLKLWDHYDNDYLPSEYQLDITSIKITDDM
CTYFV