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Lag0010671 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010671
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:3587196..3588691
RNA-Seq ExpressionLag0010671
SyntenyLag0010671
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0841495.1 hypothetical protein [Gossypium armourianum]4.2e-0641.33Show/hide
Query:  GLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL
        GLGNP   R L + LK + PQ++FL+ETK D      ++++ DF N   +   GS   FYG+P      DSWK L
Subjt:  GLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL

XP_042939230.1 uncharacterized protein LOC122274265 isoform X9 [Carya illinoinensis]4.2e-0646.43Show/hide
Query:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGS
        +GLGNPWT++ LC +++SNKP ++FL+ETK        +K+ L FE CF V ++G+
Subjt:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGS

XP_042939444.1 uncharacterized protein LOC122274474 [Carya illinoinensis]1.9e-0636.45Show/hide
Query:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFLVGVNKI-----MLLSDWKEQILCC
        +GLGNP T++ L  ++K+ +P ++FL ETK ++     +K  L FENCFSV        FYG+PN  + P SW  L G+        + L D+ E     
Subjt:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFLVGVNKI-----MLLSDWKEQILCC

Query:  SKTGSRN
         K G+ N
Subjt:  SKTGSRN

XP_042954684.1 uncharacterized protein LOC122291103 [Carya illinoinensis]2.7e-0531.09Show/hide
Query:  SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENC----FSVPSMGSSVD------FYGNPNVDQMPDSWKFLVGV-----NKIM
        + +GLGNP  ++ L  +++   P+ILFL +TK    +   LK  L+F +C    + V     +VD      FYGNP+V +  +SW  L  +        +
Subjt:  SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENC----FSVPSMGSSVD------FYGNPNVDQMPDSWKFLVGV-----NKIM

Query:  LLSDWKEQILCCSKTGSRN
        +L D  E I    K+G R+
Subjt:  LLSDWKEQILCCSKTGSRN

XP_042974797.1 uncharacterized protein LOC122306435 [Carya illinoinensis]3.6e-0527.08Show/hide
Query:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS--------------------------------------VDFYG
        +GLGNP T++ LC ++K  KP I+FL+ETK     +  LK  + F+NCF V  MG                                          FYG
Subjt:  KGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS--------------------------------------VDFYG

Query:  NPNVDQMPDSWKFLVGVNKI-----MLLSDWKEQILCCSKTGSR
        +P V +  ++W+ L            +L D+ E ++   K G R
Subjt:  NPNVDQMPDSWKFLVGVNKI-----MLLSDWKEQILCCSKTGSR

TrEMBL top hitse value%identityAlignment
A0A2N9F6N4 Uncharacterized protein3.1e-0744.05Show/hide
Query:  GSEKISEKG-LGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL
        GS K S+KG LGNP  +R L  +++S  P ILFLIETK D++  ++++  L F N   VPSMG    FYG     +  +SW+ L
Subjt:  GSEKISEKG-LGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL

A0A2N9FBC1 Reverse transcriptase domain-containing protein5.4e-0743.84Show/hide
Query:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS
        L +  G+ GS+K   +KGLGNP  +R L H++K   P++LFL+ETK D     +++  L F+N F+VPS+G S
Subjt:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS

A0A2N9G497 Reverse transcriptase domain-containing protein5.4e-0743.84Show/hide
Query:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS
        L +  G+ GS+K   +KGLGNP  +R L H++K   P++LFL+ETK D     +++  L F+N F+VPS+G S
Subjt:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS

A0A2N9GRK1 Uncharacterized protein2.2e-0845.24Show/hide
Query:  GSEKISEKG-LGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL
        GS K S+KG LGNP  +R L  +++S  P ILFLIETK D++  ++++  L F N   VPSMG    FYG P   +  +SW+ L
Subjt:  GSEKISEKG-LGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFL

A0A2N9J836 Reverse transcriptase domain-containing protein5.4e-0743.84Show/hide
Query:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS
        L +  G+ GS+K   +KGLGNP  +R L H++K   P++LFL+ETK D     +++  L F+N F+VPS+G S
Subjt:  LTKAQGKMGSEKI-SEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGACCAAGGCCCAAGGAAAGATGGGCTCAGAGAAGATATCAGAAAAGGGTTTGGGGAATCCCTGGACGCTCCGAACGCTTTGCCACGTATTGAAGAGTAATAA
ACCTCAAATTCTGTTCCTTATTGAAACAAAGAACGATGACAACATAAGTTCAATGTTGAAGAAGAATTTGGATTTTGAAAATTGCTTCAGTGTTCCAAGCATGGGAAGTA
GCGTGGACTTTTATGGCAACCCAAATGTTGATCAAATGCCAGATTCATGGAAGTTTCTCGTTGGAGTAAACAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTA
TGCTGCAGCAAAACTGGGAGCAGAAACGGCCACATCACAGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGACCAAGGCCCAAGGAAAGATGGGCTCAGAGAAGATATCAGAAAAGGGTTTGGGGAATCCCTGGACGCTCCGAACGCTTTGCCACGTATTGAAGAGTAATAA
ACCTCAAATTCTGTTCCTTATTGAAACAAAGAACGATGACAACATAAGTTCAATGTTGAAGAAGAATTTGGATTTTGAAAATTGCTTCAGTGTTCCAAGCATGGGAAGTA
GCGTGGACTTTTATGGCAACCCAAATGTTGATCAAATGCCAGATTCATGGAAGTTTCTCGTTGGAGTAAACAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTA
TGCTGCAGCAAAACTGGGAGCAGAAACGGCCACATCACAGCTCGTTAG
Protein sequenceShow/hide protein sequence
MKLTKAQGKMGSEKISEKGLGNPWTLRTLCHVLKSNKPQILFLIETKNDDNISSMLKKNLDFENCFSVPSMGSSVDFYGNPNVDQMPDSWKFLVGVNKIMLLSDWKEQIL
CCSKTGSRNGHITAR