; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010677 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010677
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:3689667..3691762
RNA-Seq ExpressionLag0010677
SyntenyLag0010677
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647279.1 hypothetical protein Csa_002929 [Cucumis sativus]8.6e-1656Show/hide
Query:  TSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNN
        T DHFP  +   DI WGP PFR E SWL    FLP +ETWW  N +  WPGHGLMMKLKAL +  + W    NNN
Subjt:  TSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNN

KAE8648339.1 hypothetical protein Csa_023126 [Cucumis sativus]6.4e-1951.19Show/hide
Query:  DHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRL
        DHFP+ ++ GDI WGP PF+FENSWL   SF P +ETWW  N +  WP HG+MMKLKALK + + W+ + +  +  L  L S+L
Subjt:  DHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRL

TYK17996.1 reverse transcriptase [Cucumis melo var. makuwa]8.3e-1950.52Show/hide
Query:  LSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRLKELDDIEERGNLTIEQRST
        ++ GDI  GP PFRFENSWL   SF P +ETWW  N +  WP HGLMMKLKAL++ ++ W+   +  +  L  L S+L+ELD+I  R  L++EQ ST
Subjt:  LSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRLKELDDIEERGNLTIEQRST

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]2.5e-2345.53Show/hide
Query:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDW-SKHLNNNSASLSMLTSRLKELDDIEE
        R+   TSDHFPI+L FG   WG +PFRFEN WL  ++F PF+ETWW    +  WPGHGLMMKLK+LK A+K W ++H     +    LT+ +  LDD+E 
Subjt:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDW-SKHLNNNSASLSMLTSRLKELDDIEE

Query:  RGNLTIEQRSTRLDIKSRFLTLM
           +T +Q   R+  K   L+++
Subjt:  RGNLTIEQRSTRLDIKSRFLTLM

XP_026459700.1 uncharacterized protein LOC113360403 [Papaver somniferum]5.6e-1532.07Show/hide
Query:  PTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHL-NNNSASLSMLTSRLKELDDIEERGNL
        PTSDH P++L   D  WGPSPFRFE  W  +  FL  +E WW        P   L +KLKALK  +K W+K +  + + +L+++ S ++ LD + E   L
Subjt:  PTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHL-NNNSASLSMLTSRLKELDDIEERGNL

Query:  TIEQRSTRLDIKSRFLTLMQL-------------IILIGSSDALEISNREMNRFYLNGFGDIYVRKALCGSRYRLATRFSQIYR
        T E+R+  L  K  F  + ++             +     + +  ISN    R Y N    +YV   L   R RL       Y+
Subjt:  TIEQRSTRLDIKSRFLTLMQL-------------IILIGSSDALEISNREMNRFYLNGFGDIYVRKALCGSRYRLATRFSQIYR

TrEMBL top hitse value%identityAlignment
A0A0A0KMS2 Uncharacterized protein6.2e-2048.48Show/hide
Query:  KFDSACLSRLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRL
        KF S  + +LD    DHFP+ ++ GDI WGP PF+FENSWL   SF P +ETWW  N +  WP HG+MMKLKALK + + W+ + +  +  L  L S+L
Subjt:  KFDSACLSRLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRL

A0A2N9EDB0 Reverse transcriptase domain-containing protein3.5e-1535.54Show/hide
Query:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSK----HLNNNSASLSMLTSRLKELDD
        RL    SDHFPI+L  G I  G  PFRFEN WL+ + FL  ++ WW   S Q  P   +  KLKALK  +K W++    H++    SLS +   +K LDD
Subjt:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSK----HLNNNSASLSMLTSRLKELDD

Query:  IEERGNLTIEQRSTRLDIKSRF--LTLMQLIILIGSSDALEISNREMNRFYLNGFGDIYVRKALCG
         E+  NLT  +R+ R  +K+      LM+ I     S +L +   + N  + +   + + RK   G
Subjt:  IEERGNLTIEQRSTRLDIKSRF--LTLMQLIILIGSSDALEISNREMNRFYLNGFGDIYVRKALCG

A0A2N9IM18 Reverse transcriptase domain-containing protein1.3e-1439.17Show/hide
Query:  KFDSACLSRLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHL-NNNSASLSMLTSRL
        KF     S L  P SDH PI+L  G +  G   F+FEN WL+ + F+  ++TWW+       P   L  KLKALK  +K W+KH+  + +     LT+ L
Subjt:  KFDSACLSRLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHL-NNNSASLSMLTSRL

Query:  KELDDIEERGNLTIEQRSTR
         +LD+ EERG L+  +R+ R
Subjt:  KELDDIEERGNLTIEQRSTR

A0A5D3D3Q8 Reverse transcriptase4.0e-1950.52Show/hide
Query:  LSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRLKELDDIEERGNLTIEQRST
        ++ GDI  GP PFRFENSWL   SF P +ETWW  N +  WP HGLMMKLKAL++ ++ W+   +  +  L  L S+L+ELD+I  R  L++EQ ST
Subjt:  LSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRLKELDDIEERGNLTIEQRST

A0A6J1E2G6 uncharacterized protein LOC1110254051.2e-2345.53Show/hide
Query:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDW-SKHLNNNSASLSMLTSRLKELDDIEE
        R+   TSDHFPI+L FG   WG +PFRFEN WL  ++F PF+ETWW    +  WPGHGLMMKLK+LK A+K W ++H     +    LT+ +  LDD+E 
Subjt:  RLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDW-SKHLNNNSASLSMLTSRLKELDDIEE

Query:  RGNLTIEQRSTRLDIKSRFLTLM
           +T +Q   R+  K   L+++
Subjt:  RGNLTIEQRSTRLDIKSRFLTLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAAAATTTGACTCGGCTTGTTTATCGCGGCTGGACGGACCGACATCAGATCATTTTCCAATTATCTTATCTTTTGGAGATATTGTCTGGGGTCCATCTCCCTT
TAGGTTTGAAAACTCTTGGCTCCAACAACAATCTTTCTTGCCTTTTATTGAAACCTGGTGGAACCAAAACTCTATCCAAGAGTGGCCTGGTCATGGATTAATGATGAAAT
TAAAAGCTCTAAAGTTGGCAGTCAAGGACTGGAGTAAGCATCTGAACAACAATTCAGCTAGTTTGTCTATGCTAACATCCAGATTAAAGGAATTGGATGATATAGAAGAA
AGGGGAAATTTAACCATTGAGCAGAGAAGTACTCGGTTAGACATAAAAAGCAGATTCTTGACCTTAATGCAATTGATCATACTCATTGGAAGCAGCGATGCATTGGAAAT
ATCAAACAGAGAAATGAACCGCTTTTATCTAAATGGATTTGGCGATATTTATGTGAGGAAGGCTCTCTGTGGCAGCAGATATAGACTTGCTACAAGATTTTCACAGATTT
ATAGGCTTTCTAATGCTCATGCAACAATGGCTTATTTATGGAATTCGGAAAATAATGATTGGGATTTGGGCCTTAGAAGATATCTTAAAGACTCGGAGATTGTAGATTGG
GCATCTCTTGCCCATATATTACAAACTTTTGCTCTAAAGAGGGCAAATGATTCATGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCAAAATTTGACTCGGCTTGTTTATCGCGGCTGGACGGACCGACATCAGATCATTTTCCAATTATCTTATCTTTTGGAGATATTGTCTGGGGTCCATCTCCCTT
TAGGTTTGAAAACTCTTGGCTCCAACAACAATCTTTCTTGCCTTTTATTGAAACCTGGTGGAACCAAAACTCTATCCAAGAGTGGCCTGGTCATGGATTAATGATGAAAT
TAAAAGCTCTAAAGTTGGCAGTCAAGGACTGGAGTAAGCATCTGAACAACAATTCAGCTAGTTTGTCTATGCTAACATCCAGATTAAAGGAATTGGATGATATAGAAGAA
AGGGGAAATTTAACCATTGAGCAGAGAAGTACTCGGTTAGACATAAAAAGCAGATTCTTGACCTTAATGCAATTGATCATACTCATTGGAAGCAGCGATGCATTGGAAAT
ATCAAACAGAGAAATGAACCGCTTTTATCTAAATGGATTTGGCGATATTTATGTGAGGAAGGCTCTCTGTGGCAGCAGATATAGACTTGCTACAAGATTTTCACAGATTT
ATAGGCTTTCTAATGCTCATGCAACAATGGCTTATTTATGGAATTCGGAAAATAATGATTGGGATTTGGGCCTTAGAAGATATCTTAAAGACTCGGAGATTGTAGATTGG
GCATCTCTTGCCCATATATTACAAACTTTTGCTCTAAAGAGGGCAAATGATTCATGGAAATAG
Protein sequenceShow/hide protein sequence
MPSKFDSACLSRLDGPTSDHFPIILSFGDIVWGPSPFRFENSWLQQQSFLPFIETWWNQNSIQEWPGHGLMMKLKALKLAVKDWSKHLNNNSASLSMLTSRLKELDDIEE
RGNLTIEQRSTRLDIKSRFLTLMQLIILIGSSDALEISNREMNRFYLNGFGDIYVRKALCGSRYRLATRFSQIYRLSNAHATMAYLWNSENNDWDLGLRRYLKDSEIVDW
ASLAHILQTFALKRANDSWK