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Lag0010715 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010715
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:4515325..4516811
RNA-Seq ExpressionLag0010715
SyntenyLag0010715
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0592181.1 hypothetical protein [Gossypium raimondii]1.5e-0630.15Show/hide
Query:  LQKLPKSLKTPVLFSWL----GWKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWM
        L+K  K  +  V   W     GW E + + + I++ K LRR VK+ +++        ++YE+LPD C  CE IG++AK C  F    G + Q  QYG WM
Subjt:  LQKLPKSLKTPVLFSWL----GWKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWM

Query:  QFSGRSLSLFQSPSTIPLRNSLAMVDMALADNKTPT
        +    + +L +      +   +A   M++  +++PT
Subjt:  QFSGRSLSLFQSPSTIPLRNSLAMVDMALADNKTPT

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.1e-0940.7Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLS
        W   L V V  D+ K L R +K+NL+ P+G CW PI+YE+LPD   +C  + H  KDC          S+  QYG W++F G   S
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.4e-1549.4Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQ-KHQYGMWMQFSG
        W  SL + V IDI+K LRR +K+N++ P+G CW PI+YE+LPD C +C  IGHS+ DC + YL A   S+   +YG W++F G
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQ-KHQYGMWMQFSG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.6e-0931.08Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLSLFQSPSTIPLRNSL
        W  +L V V +DISK LRR +K+NL+ P+G  W PI+YE+LPD C +C   G S+            S +KHQYG W+++ G         +  P    +
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLSLFQSPSTIPLRNSL

Query:  AMVDMALADNKTPTMTASRDSPLTGSDSGLME---ISPVMVDSVTPPT
              L D       +S  SP+     G+       P+ +   +P T
Subjt:  AMVDMALADNKTPTMTASRDSPLTGSDSGLME---ISPVMVDSVTPPT

XP_035551689.1 uncharacterized protein LOC118349870 [Juglans regia]5.3e-0727.44Show/hide
Query:  LLQNGPWTF-----------------ILGLQLAFLWAFGLGSSMDFF--KLLQKLPKSL----KTPVLFSWLGWKESLCVWVTIDISKQLRRCVKVNLEE
        +L NGPWTF                  + + LA  W       +D    + ++K+  +L       ++ +  GW E + V +++DISK L R ++V + E
Subjt:  LLQNGPWTF-----------------ILGLQLAFLWAFGLGSSMDFF--KLLQKLPKSL----KTPVLFSWLGWKESLCVWVTIDISKQLRRCVKVNLEE

Query:  PLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAG-CSSQKHQYGMWMQFSGRSLSL--FQSPST-------IPL---RNSLAMVD-MALADNKTP
             W   +YEKLP  C YC  +GH  +DC  +  + G        YG WM+    S+    +  PST       IP+   R++L + D MA+ +    
Subjt:  PLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAG-CSSQKHQYGMWMQFSGRSLSL--FQSPST-------IPL---RNSLAMVD-MALADNKTP

Query:  TMTASRDSPLTGSDS
        +++ S +  LTG+ S
Subjt:  TMTASRDSPLTGSDS

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054815.5e-1040.7Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLS
        W   L V V  D+ K L R +K+NL+ P+G CW PI+YE+LPD   +C  + H  KDC          S+  QYG W++F G   S
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLS

A0A6J1DU55 uncharacterized protein LOC1110231351.1e-1549.4Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQ-KHQYGMWMQFSG
        W  SL + V IDI+K LRR +K+N++ P+G CW PI+YE+LPD C +C  IGHS+ DC + YL A   S+   +YG W++F G
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQ-KHQYGMWMQFSG

A0A6J1DX30 uncharacterized protein LOC1110248744.6e-0931.08Show/hide
Query:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLSLFQSPSTIPLRNSL
        W  +L V V +DISK LRR +K+NL+ P+G  W PI+YE+LPD C +C   G S+            S +KHQYG W+++ G         +  P    +
Subjt:  WKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLSLFQSPSTIPLRNSL

Query:  AMVDMALADNKTPTMTASRDSPLTGSDSGLME---ISPVMVDSVTPPT
              L D       +S  SP+     G+       P+ +   +P T
Subjt:  AMVDMALADNKTPTMTASRDSPLTGSDSGLME---ISPVMVDSVTPPT

A0A6P9EVN9 uncharacterized protein LOC1183498702.5e-0727.44Show/hide
Query:  LLQNGPWTF-----------------ILGLQLAFLWAFGLGSSMDFF--KLLQKLPKSL----KTPVLFSWLGWKESLCVWVTIDISKQLRRCVKVNLEE
        +L NGPWTF                  + + LA  W       +D    + ++K+  +L       ++ +  GW E + V +++DISK L R ++V + E
Subjt:  LLQNGPWTF-----------------ILGLQLAFLWAFGLGSSMDFF--KLLQKLPKSL----KTPVLFSWLGWKESLCVWVTIDISKQLRRCVKVNLEE

Query:  PLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAG-CSSQKHQYGMWMQFSGRSLSL--FQSPST-------IPL---RNSLAMVD-MALADNKTP
             W   +YEKLP  C YC  +GH  +DC  +  + G        YG WM+    S+    +  PST       IP+   R++L + D MA+ +    
Subjt:  PLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAG-CSSQKHQYGMWMQFSGRSLSL--FQSPST-------IPL---RNSLAMVD-MALADNKTP

Query:  TMTASRDSPLTGSDS
        +++ S +  LTG+ S
Subjt:  TMTASRDSPLTGSDS

A0A7J8PSA8 zf-CCHC_4 domain-containing protein7.4e-0730.15Show/hide
Query:  LQKLPKSLKTPVLFSWL----GWKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWM
        L+K  K  +  V   W     GW E + + + I++ K LRR VK+ +++        ++YE+LPD C  CE IG++AK C  F    G + Q  QYG WM
Subjt:  LQKLPKSLKTPVLFSWL----GWKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSYCETIGHSAKDCGSFYLVAGCSSQKHQYGMWM

Query:  QFSGRSLSLFQSPSTIPLRNSLAMVDMALADNKTPT
        +    + +L +      +   +A   M++  +++PT
Subjt:  QFSGRSLSLFQSPSTIPLRNSLAMVDMALADNKTPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAGGCTAGCGTCTTGATGCTAGGCCTTGGATTTCTTCTACAAAATGGCCCTTGGACTTTTATCTTGGGCCTCCAACTTGCTTTTCTTTGGGCTTTTGGACTTGG
ATCTTCAATGGACTTCTTCAAATTGCTTCAAAAGCTTCCAAAATCTCTCAAAACTCCGGTTTTGTTTTCGTGGCTCGGGTGGAAGGAAAGTCTTTGCGTTTGGGTCACTA
TTGATATCTCTAAACAACTACGACGATGTGTCAAAGTGAACTTAGAAGAACCATTAGGCACTTGCTGGGCTCCTATTCGATATGAAAAGCTACCAGATCTCTGTTCATAT
TGCGAAACAATTGGGCATAGTGCAAAGGATTGTGGATCGTTTTACCTTGTTGCAGGTTGCTCCTCTCAAAAGCACCAATACGGAATGTGGATGCAATTTTCTGGAAGATC
ATTAAGCTTATTTCAATCACCCAGCACTATCCCTTTGCGTAATTCCTTGGCGATGGTGGATATGGCGTTAGCTGACAACAAAACTCCCACAATGACAGCAAGTAGGGATT
CTCCGTTGACGGGCTCCGACAGCGGACTGATGGAAATTTCTCCGGTGATGGTGGATTCGGTAACGCCCCCTACAGTGGCCAATACTCATGCATTAAATGAGAATAATTTA
TGCATTGATGGCCCTGACTCAGCTAAGGTGAATTTCGTGGATCTTAAGGGAAAAACGGTTATGGAGGGAGGATTATTTCAGCCAGTTAATGTGGATGTTTCAAATCCACG
TCTTATGCAACATTCCTTCAATTTGGAGACTTATCCCATTACGAATCATTCAGACCAGAGCAAGCTCGAACCGAACGCTGAACCACAGACCGATCCACTTGAAAAATCGA
TTGACCCCACTCTTTTTGGTAGAACAATTGAGCCAACCCAGACAACAACTAAATCCCACGTGGCTGATTTGAGTGCAACAATGAAGGGGTGGAAACGCCGAGCAAGGAAT
CCAGTGGCGACCAATTTATGTTTGTCTTTTGTTGAAAACCAAAAGAAAAAAGTAGGTGATGGAATGGCAGGGGACACCAAAAAACGGCCTCGCATAGTAGAAGACAATTT
GATTGATCCAAATATTTCATCGGTGGAAGCTGAATTACAGCCCCGCCAAGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAGGCTAGCGTCTTGATGCTAGGCCTTGGATTTCTTCTACAAAATGGCCCTTGGACTTTTATCTTGGGCCTCCAACTTGCTTTTCTTTGGGCTTTTGGACTTGG
ATCTTCAATGGACTTCTTCAAATTGCTTCAAAAGCTTCCAAAATCTCTCAAAACTCCGGTTTTGTTTTCGTGGCTCGGGTGGAAGGAAAGTCTTTGCGTTTGGGTCACTA
TTGATATCTCTAAACAACTACGACGATGTGTCAAAGTGAACTTAGAAGAACCATTAGGCACTTGCTGGGCTCCTATTCGATATGAAAAGCTACCAGATCTCTGTTCATAT
TGCGAAACAATTGGGCATAGTGCAAAGGATTGTGGATCGTTTTACCTTGTTGCAGGTTGCTCCTCTCAAAAGCACCAATACGGAATGTGGATGCAATTTTCTGGAAGATC
ATTAAGCTTATTTCAATCACCCAGCACTATCCCTTTGCGTAATTCCTTGGCGATGGTGGATATGGCGTTAGCTGACAACAAAACTCCCACAATGACAGCAAGTAGGGATT
CTCCGTTGACGGGCTCCGACAGCGGACTGATGGAAATTTCTCCGGTGATGGTGGATTCGGTAACGCCCCCTACAGTGGCCAATACTCATGCATTAAATGAGAATAATTTA
TGCATTGATGGCCCTGACTCAGCTAAGGTGAATTTCGTGGATCTTAAGGGAAAAACGGTTATGGAGGGAGGATTATTTCAGCCAGTTAATGTGGATGTTTCAAATCCACG
TCTTATGCAACATTCCTTCAATTTGGAGACTTATCCCATTACGAATCATTCAGACCAGAGCAAGCTCGAACCGAACGCTGAACCACAGACCGATCCACTTGAAAAATCGA
TTGACCCCACTCTTTTTGGTAGAACAATTGAGCCAACCCAGACAACAACTAAATCCCACGTGGCTGATTTGAGTGCAACAATGAAGGGGTGGAAACGCCGAGCAAGGAAT
CCAGTGGCGACCAATTTATGTTTGTCTTTTGTTGAAAACCAAAAGAAAAAAGTAGGTGATGGAATGGCAGGGGACACCAAAAAACGGCCTCGCATAGTAGAAGACAATTT
GATTGATCCAAATATTTCATCGGTGGAAGCTGAATTACAGCCCCGCCAAGAGCCATGA
Protein sequenceShow/hide protein sequence
MLKASVLMLGLGFLLQNGPWTFILGLQLAFLWAFGLGSSMDFFKLLQKLPKSLKTPVLFSWLGWKESLCVWVTIDISKQLRRCVKVNLEEPLGTCWAPIRYEKLPDLCSY
CETIGHSAKDCGSFYLVAGCSSQKHQYGMWMQFSGRSLSLFQSPSTIPLRNSLAMVDMALADNKTPTMTASRDSPLTGSDSGLMEISPVMVDSVTPPTVANTHALNENNL
CIDGPDSAKVNFVDLKGKTVMEGGLFQPVNVDVSNPRLMQHSFNLETYPITNHSDQSKLEPNAEPQTDPLEKSIDPTLFGRTIEPTQTTTKSHVADLSATMKGWKRRARN
PVATNLCLSFVENQKKKVGDGMAGDTKKRPRIVEDNLIDPNISSVEAELQPRQEP