; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010726 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010726
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc knuckle CX2CX4HX4C
Genome locationchr1:4685245..4686477
RNA-Seq ExpressionLag0010726
SyntenyLag0010726
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5462052.1 hypothetical protein F2P56_018092 [Juglans regia]7.7e-0645.31Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQ-NTVMNYGDWLRFDP
        G  I V DA  RSWIP +YERL  FC++CG++ H    CS  +S   +   + + YG WLR DP
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQ-NTVMNYGDWLRFDP

XP_017217457.1 PREDICTED: uncharacterized protein LOC108195031 [Daucus carota subsp. sativus]7.7e-0637.78Show/hide
Query:  SWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPSEG
        SWI  +YERL  FCF CGL+GHQ +DC++ Y++   +  V  YG WLR   K     +L  + +  G G  + A   G S++ + T  +G
Subjt:  SWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPSEG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.0e-0647.54Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRF
        G+K+ ++  MG  WIPIQYERL +F + CG + H  KDCS       S+N  + YG WLRF
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.8e-1050Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFY-SSDRSQNTVMNYGDWLRF
        G+KI ++  MG  WIPIQYERL +FC+FCG+IGH   DC   Y ++         YG WLRF
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFY-SSDRSQNTVMNYGDWLRF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.7e-0830.72Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPS
        G+K+ ++  +G +WIPIQYERL +FC+ CGL            SS R ++    YG WLR+  +G V  ++P  + P    Q  +    G +S S ST  
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPS

Query:  EGA---SLQIRPVKGDQLTEVKEPVTSPLKASWYSLSSGGPPNDKGKGKIMYPLAGGTVNGWKIPN
         GA    +Q  P  G     ++ PVT   K        G  P+ +GK  ++       +N  +I N
Subjt:  EGA---SLQIRPVKGDQLTEVKEPVTSPLKASWYSLSSGGPPNDKGKGKIMYPLAGGTVNGWKIPN

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054819.8e-0747.54Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRF
        G+K+ ++  MG  WIPIQYERL +F + CG + H  KDCS       S+N  + YG WLRF
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRF

A0A6J1DU55 uncharacterized protein LOC1110231354.3e-1050Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFY-SSDRSQNTVMNYGDWLRF
        G+KI ++  MG  WIPIQYERL +FC+FCG+IGH   DC   Y ++         YG WLRF
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFY-SSDRSQNTVMNYGDWLRF

A0A6J1DX30 uncharacterized protein LOC1110248741.8e-0830.72Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPS
        G+K+ ++  +G +WIPIQYERL +FC+ CGL            SS R ++    YG WLR+  +G V  ++P  + P    Q  +    G +S S ST  
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPS

Query:  EGA---SLQIRPVKGDQLTEVKEPVTSPLKASWYSLSSGGPPNDKGKGKIMYPLAGGTVNGWKIPN
         GA    +Q  P  G     ++ PVT   K        G  P+ +GK  ++       +N  +I N
Subjt:  EGA---SLQIRPVKGDQLTEVKEPVTSPLKASWYSLSSGGPPNDKGKGKIMYPLAGGTVNGWKIPN

A0A803L9H9 Uncharacterized protein2.2e-0632.52Show/hide
Query:  GRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVM-NYGDWLRFDP--KGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPSEGASLQI
        G  W+ I+YERL +FCFFCG++ H  K+C +  SS+  +N V+  YG WLR  P       ++  MRE         ++ ++G      +T S   ++++
Subjt:  GRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDRSQNTVM-NYGDWLRFDP--KGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPSEGASLQI

Query:  RPVKGDQLTEVKEPVTSPLKASW
         P+   +  +   P TSP K SW
Subjt:  RPVKGDQLTEVKEPVTSPLKASW

A0A803NE34 Uncharacterized protein2.2e-0638.16Show/hide
Query:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDR-SQNTVMNYGDWLRFDPKGVVLESLPMRE
        G+KI   ++    WI  +YERL +FC++CG +GH  +DC +    DR S +T+  YG WL   P      +L  RE
Subjt:  GVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGHQFKDCSVFYSSDR-SQNTVMNYGDWLRFDPKGVVLESLPMRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCAACTCCCTTGTTCAAGACTGGTCGAAACTGAGCCTCACCCCAGTGGAAAGTGAGTCCCATCGGTTCCTTGCGACGGAAGTAATGCGGAAAACATTTGTTTC
AACATGGCGAGTTGCTCAAGGTCTGAGAGTGAAAATGCTTGGTAAAAATATTTTCATTTTCAGGAGCAAGTTTAAGAATTCGGATTCGTGTGGACATTTCTCGTCCATTA
CGTCGCTTGGTGTGAAGATCACCGTTAATGATGCAATGGGGAGAAGCTGGATTCCGATTCAATACGAGAGGCTATTGGAATTTTGTTTCTTCTGTGGACTTATTGGTCAT
CAATTTAAGGATTGTAGTGTGTTTTATTCTTCTGATAGGTCTCAAAACACAGTGATGAATTACGGAGACTGGCTTCGTTTTGACCCAAAAGGAGTGGTATTGGAAAGCTT
ACCTATGCGGGAAATGCCTCTGGGGATTGGGCAAGCTTCAGTTGCGGCAGTGCGAGGTGCATCCTCAGTTTCGAGGTCGACGCCTTCTGAGGGAGCTTCGCTTCAGATTC
GGCCGGTTAAAGGAGATCAATTGACGGAGGTGAAGGAGCCAGTTACTTCTCCCTTGAAGGCGTCGTGGTATTCCTTATCAAGTGGCGGCCCTCCCAATGACAAAGGAAAA
GGAAAAATAATGTACCCTTTGGCTGGTGGGACGGTGAATGGCTGGAAAATTCCTAATTCCTCCTATGTTCAGGCTTCTTCTTCCCGTCAATCTCTAATTTCGGCGACTGG
AGCTTCAAATCCAACTCAATTAATGTCTCCGACAGTTACAGAACCGAAAGGGTTTCATTTTTGTGGTTCGGGTTTTCTGGAGCGTTACCATCGTCAATTAAAGGAATTTA
ATGATATATTCAATGGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCAACTCCCTTGTTCAAGACTGGTCGAAACTGAGCCTCACCCCAGTGGAAAGTGAGTCCCATCGGTTCCTTGCGACGGAAGTAATGCGGAAAACATTTGTTTC
AACATGGCGAGTTGCTCAAGGTCTGAGAGTGAAAATGCTTGGTAAAAATATTTTCATTTTCAGGAGCAAGTTTAAGAATTCGGATTCGTGTGGACATTTCTCGTCCATTA
CGTCGCTTGGTGTGAAGATCACCGTTAATGATGCAATGGGGAGAAGCTGGATTCCGATTCAATACGAGAGGCTATTGGAATTTTGTTTCTTCTGTGGACTTATTGGTCAT
CAATTTAAGGATTGTAGTGTGTTTTATTCTTCTGATAGGTCTCAAAACACAGTGATGAATTACGGAGACTGGCTTCGTTTTGACCCAAAAGGAGTGGTATTGGAAAGCTT
ACCTATGCGGGAAATGCCTCTGGGGATTGGGCAAGCTTCAGTTGCGGCAGTGCGAGGTGCATCCTCAGTTTCGAGGTCGACGCCTTCTGAGGGAGCTTCGCTTCAGATTC
GGCCGGTTAAAGGAGATCAATTGACGGAGGTGAAGGAGCCAGTTACTTCTCCCTTGAAGGCGTCGTGGTATTCCTTATCAAGTGGCGGCCCTCCCAATGACAAAGGAAAA
GGAAAAATAATGTACCCTTTGGCTGGTGGGACGGTGAATGGCTGGAAAATTCCTAATTCCTCCTATGTTCAGGCTTCTTCTTCCCGTCAATCTCTAATTTCGGCGACTGG
AGCTTCAAATCCAACTCAATTAATGTCTCCGACAGTTACAGAACCGAAAGGGTTTCATTTTTGTGGTTCGGGTTTTCTGGAGCGTTACCATCGTCAATTAAAGGAATTTA
ATGATATATTCAATGGGCCTTGA
Protein sequenceShow/hide protein sequence
MDPNSLVQDWSKLSLTPVESESHRFLATEVMRKTFVSTWRVAQGLRVKMLGKNIFIFRSKFKNSDSCGHFSSITSLGVKITVNDAMGRSWIPIQYERLLEFCFFCGLIGH
QFKDCSVFYSSDRSQNTVMNYGDWLRFDPKGVVLESLPMREMPLGIGQASVAAVRGASSVSRSTPSEGASLQIRPVKGDQLTEVKEPVTSPLKASWYSLSSGGPPNDKGK
GKIMYPLAGGTVNGWKIPNSSYVQASSSRQSLISATGASNPTQLMSPTVTEPKGFHFCGSGFLERYHRQLKEFNDIFNGP