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Lag0010768 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010768
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCob intron3 ORF
Genome locationchr1:5975733..5976744
RNA-Seq ExpressionLag0010768
SyntenyLag0010768
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD25595.1 TPA_asm: hypothetical protein HUJ06_027059 [Nelumbo nucifera]9.0e-1351.9Show/hide
Query:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIR
        L ++  + +  ++RYVRY DD+ F +L+G +SE VSQ F + F EAL  +KLEATS EL+RG + P +TLVLGVL+SI+
Subjt:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIR

KUM47405.1 cob intron3 ORF [Picea glauca]4.6e-0945.78Show/hide
Query:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL
        ++ EFM     + YVRY DD+ FA+ +G +SE V   + +FF +AL +LKL  TS+EL+RGI  P  T VLG+++SI P   L
Subjt:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL

PVH32257.1 hypothetical protein PAHAL_9G354900 [Panicum hallii]7.4e-0752.24Show/hide
Query:  VRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKP-YSTLVLGVLISIRPD
        V YVD+  FA+ +G  SE VSQ F Q   E+L ELKL   SLEL+R +SKP Y+ ++ GVL+SI  D
Subjt:  VRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKP-YSTLVLGVLISIRPD

QWQ49911.1 hypothetical protein [Zelkova schneideriana]1.5e-2883.33Show/hide
Query:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL
        ++MQ+FMS+ ARI+YVRY DDIAF + EGANSE+VSQGF QFFNEALTELKLEATSLELVRGISKP STLVLGVLISIRPDR L
Subjt:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL

YP_009381647.1 hypothetical protein AEK19_MT1231 [Utricularia reniformis]3.7e-0673.68Show/hide
Query:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQG
        ++MQ+F+S+ AR+RYVRY DDIAFAMLEGANSE+VS G
Subjt:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQG

TrEMBL top hitse value%identityAlignment
A0A117NGV6 Cob intron3 ORF2.2e-0945.78Show/hide
Query:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL
        ++ EFM     + YVRY DD+ FA+ +G +SE V   + +FF +AL +LKL  TS+EL+RGI  P  T VLG+++SI P   L
Subjt:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL

A0A1Y0B229 Uncharacterized protein1.8e-0673.68Show/hide
Query:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQG
        ++MQ+F+S+ AR+RYVRY DDIAFAMLEGANSE+VS G
Subjt:  LEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQG

A0A2T8I3J9 Uncharacterized protein3.6e-0752.24Show/hide
Query:  VRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKP-YSTLVLGVLISIRPD
        V YVD+  FA+ +G  SE VSQ F Q   E+L ELKL   SLEL+R +SKP Y+ ++ GVL+SI  D
Subjt:  VRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKP-YSTLVLGVLISIRPD

A0A5N6L0M6 Reverse transcriptase domain-containing protein2.0e-0538.55Show/hide
Query:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL
        E+   M     +RY RY DD+ F  L+GA+SE   + F   F E L  LKLE + +EL+R    P+ T VLG++  + P   L
Subjt:  EMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLEATSLELVRGISKPYSTLVLGVLISIRPDRNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATACACACATACGTAAATCTGACCTTTTATCGAGAGTTCTTCTAGGCCTTAGTCAAAGAATTGCCGAAATACTAGAGTGCTGCTATAGGGAATGCTACCTTTACTC
TGCTACTTCTAACGCTCGAACTGTCCGAGCTCCTGCAAGAGGATTAGCTCAAGGAAAAGCCCTTGAAATGCAAGAATTTATGAGTGAATCAGCGAGAATTAGGTATGTGC
GCTACGTTGACGATATAGCTTTTGCTATGTTAGAAGGAGCCAACTCAGAAATTGTAAGCCAAGGGTTCCATCAATTCTTTAATGAGGCTTTGACGGAGCTCAAACTGGAA
GCAACTAGTTTGGAGCTCGTTCGAGGAATAAGCAAGCCATACTCCACCTTAGTTCTCGGAGTCCTAATATCAATTCGTCCGGACAGAAACTTGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATACACACATACGTAAATCTGACCTTTTATCGAGAGTTCTTCTAGGCCTTAGTCAAAGAATTGCCGAAATACTAGAGTGCTGCTATAGGGAATGCTACCTTTACTC
TGCTACTTCTAACGCTCGAACTGTCCGAGCTCCTGCAAGAGGATTAGCTCAAGGAAAAGCCCTTGAAATGCAAGAATTTATGAGTGAATCAGCGAGAATTAGGTATGTGC
GCTACGTTGACGATATAGCTTTTGCTATGTTAGAAGGAGCCAACTCAGAAATTGTAAGCCAAGGGTTCCATCAATTCTTTAATGAGGCTTTGACGGAGCTCAAACTGGAA
GCAACTAGTTTGGAGCTCGTTCGAGGAATAAGCAAGCCATACTCCACCTTAGTTCTCGGAGTCCTAATATCAATTCGTCCGGACAGAAACTTGAGTTAA
Protein sequenceShow/hide protein sequence
MHTHIRKSDLLSRVLLGLSQRIAEILECCYRECYLYSATSNARTVRAPARGLAQGKALEMQEFMSESARIRYVRYVDDIAFAMLEGANSEIVSQGFHQFFNEALTELKLE
ATSLELVRGISKPYSTLVLGVLISIRPDRNLS