| GenBank top hits | e value | %identity | Alignment |
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| KAA0040928.1 gag/pol protein [Cucumis melo var. makuwa] | 2.9e-38 | 55.42 | Show/hide |
Query: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGM--PYAIG
AQ +I DD IED L+F++ MNDVD QW KAMDLEM+S++ NSIW LV N ++D C+YK+I+SSTVAF +L++ ++ + +G
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGM--PYAIG
Query: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
VS YQSNPG DHW V ILKYL R +YMLVYG+KDLILTGYTD+D T KD KSTS SVFTL
Subjt: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| KAA0049866.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-38 | 43.14 | Show/hide |
Query: PQSKVSLSVLTNEATEKSTRVVDKT-AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG---------------------
P + + + +S R + T QVVI DD +ED LS+++ +NDVDKDQW KAMDLEM+S++FNS+W+LV L +G
Subjt: PQSKVSLSVLTNEATEKSTRVVDKT-AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG---------------------
Query: -------------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKEL----------GMP---YAIGNVSEYQSNPGY
FD VIKS+GF+Q++D C+YKKI + F M L E G P YA+G VS YQSNPG
Subjt: -------------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKEL----------GMP---YAIGNVSEYQSNPGY
Query: DHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
DHW V I KYL RM +YMLVYGAKDLILTGYTD D T KD KSTS SVFTL
Subjt: DHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| KAA0053145.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-35 | 48.37 | Show/hide |
Query: QVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDM--------------VIKSFGFNQ------DIDGSCIYKKIVSSTV
Q+VI +D IED L++++ MND+D DQW KAMDLEM+S++ NS+W LV + D+ +++ G+ Q ++D C+YK+I++STV
Subjt: QVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDM--------------VIKSFGFNQ------DIDGSCIYKKIVSSTV
Query: AFFMLHLKE-LGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
AF +L++ + L + +G VS YQSNP DHW V ILKYL R +YMLVYG+KDLILTGY D+D T KD KSTS SVFTL
Subjt: AFFMLHLKE-LGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| TYK07531.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 3.2e-37 | 53.61 | Show/hide |
Query: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLD--GFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGMPYAIG
AQ++I DD IED L++++ MNDVD DQW K MDLEM+S++ N +W L+ G +K+ F Q++D C+ KKI++STV+F +L G+ Y++G
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLD--GFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGMPYAIG
Query: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
VS+YQSN G DHW TV ILKYL R+ ++MLVYG+KDLILTGYTD D T KD KSTS VFTL
Subjt: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| TYK19425.1 gag/pol protein [Cucumis melo var. makuwa] | 4.5e-39 | 46.52 | Show/hide |
Query: MSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG-
M +HKP+SK+ L NEAT+ S RVVD+ QVVI DD +ED S+++ MNDVDKDQW KAMDLEM+S++FNS+W+L L +G
Subjt: MSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG-
Query: ---------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMLHLKELGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGA
+ M +K+ N +++ S + I + + ML+ + + YA+G VS YQSNPG DHW V ILKYL R +YMLVYGA
Subjt: ---------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMLHLKELGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGA
Query: KDLILTGYTDTDVLTGKDLMKSTSVSVFTL
KDLILTGYTD D T KD KSTS SVFTL
Subjt: KDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7UHJ3 Gag/pol protein | 8.6e-36 | 48.37 | Show/hide |
Query: QVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDM--------------VIKSFGFNQ------DIDGSCIYKKIVSSTV
Q+VI +D IED L++++ MND+D DQW KAMDLEM+S++ NS+W LV + D+ +++ G+ Q ++D C+YK+I++STV
Subjt: QVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDM--------------VIKSFGFNQ------DIDGSCIYKKIVSSTV
Query: AFFMLHLKE-LGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
AF +L++ + L + +G VS YQSNP DHW V ILKYL R +YMLVYG+KDLILTGY D+D T KD KSTS SVFTL
Subjt: AFFMLHLKE-LGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3C6L6 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 1.6e-37 | 53.61 | Show/hide |
Query: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLD--GFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGMPYAIG
AQ++I DD IED L++++ MNDVD DQW K MDLEM+S++ N +W L+ G +K+ F Q++D C+ KKI++STV+F +L G+ Y++G
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLD--GFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGMPYAIG
Query: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
VS+YQSN G DHW TV ILKYL R+ ++MLVYG+KDLILTGYTD D T KD KSTS VFTL
Subjt: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3CK74 Gag/pol protein | 1.4e-38 | 55.42 | Show/hide |
Query: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGM--PYAIG
AQ +I DD IED L+F++ MNDVD QW KAMDLEM+S++ NSIW LV N ++D C+YK+I+SSTVAF +L++ ++ + +G
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKELGM--PYAIG
Query: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
VS YQSNPG DHW V ILKYL R +YMLVYG+KDLILTGYTD+D T KD KSTS SVFTL
Subjt: NVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3D7C0 Gag/pol protein | 2.2e-39 | 46.52 | Show/hide |
Query: MSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG-
M +HKP+SK+ L NEAT+ S RVVD+ QVVI DD +ED S+++ MNDVDKDQW KAMDLEM+S++FNS+W+L L +G
Subjt: MSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG-
Query: ---------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMLHLKELGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGA
+ M +K+ N +++ S + I + + ML+ + + YA+G VS YQSNPG DHW V ILKYL R +YMLVYGA
Subjt: ---------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMLHLKELGMPYAIGNVSEYQSNPGYDHWRTVNYILKYLWRMMNYMLVYGA
Query: KDLILTGYTDTDVLTGKDLMKSTSVSVFTL
KDLILTGYTD D T KD KSTS SVFTL
Subjt: KDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3DC34 Gag/pol protein | 1.8e-38 | 43.14 | Show/hide |
Query: PQSKVSLSVLTNEATEKSTRVVDKT-AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG---------------------
P + + + +S R + T QVVI DD +ED LS+++ +NDVDKDQW KAMDLEM+S++FNS+W+LV L +G
Subjt: PQSKVSLSVLTNEATEKSTRVVDKT-AQVVILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKSLHFNSIWDLVHLLDG---------------------
Query: -------------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKEL----------GMP---YAIGNVSEYQSNPGY
FD VIKS+GF+Q++D C+YKKI + F M L E G P YA+G VS YQSNPG
Subjt: -------------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMLHLKEL----------GMP---YAIGNVSEYQSNPGY
Query: DHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
DHW V I KYL RM +YMLVYGAKDLILTGYTD D T KD KSTS SVFTL
Subjt: DHWRTVNYILKYLWRMMNYMLVYGAKDLILTGYTDTDVLTGKDLMKSTSVSVFTL
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