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Lag0010782 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010782
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionrRNA intron-encoded homing endonuclease, putative
Genome locationchr1:6529184..6529688
RNA-Seq ExpressionLag0010782
SyntenyLag0010782
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2411351.1 hypothetical protein I3760_Q008500 [Carya illinoinensis]1.7e-2980.46Show/hide
Query:  MKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
        MKDEQ    LPRMFSLIK+ESWG KTIRYRPSLNHKRCRPGIG    +  PAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  MKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

TKS01553.1 hypothetical protein D5086_0000171920 [Populus alba]1.5e-2859.57Show/hide
Query:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA
        V TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +VA
Subjt:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA

Query:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

TKS05954.1 hypothetical protein D5086_0000127820 [Populus alba]2.1e-3563.51Show/hide
Query:  VSTGRLVPSADDALLAL--------TGFRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNH-KRCR
        V TGRLVPS  DALLAL          F  I+LAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ    LPRMF + +    G +       ++      
Subjt:  VSTGRLVPSADDALLAL--------TGFRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNH-KRCR

Query:  PGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         G+ +VA RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  PGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

TKS05961.1 hypothetical protein D5086_0000127890 [Populus alba]3.8e-2959.86Show/hide
Query:  MVSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNV
        MV TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +V
Subjt:  MVSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNV

Query:  ALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
        A RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  ALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

TKS17488.1 hypothetical protein D5086_0000013120 [Populus alba]1.5e-2859.57Show/hide
Query:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA
        V TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +VA
Subjt:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA

Query:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

TrEMBL top hitse value%identityAlignment
A0A4U5PVW4 Uncharacterized protein7.1e-2959.57Show/hide
Query:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA
        V TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +VA
Subjt:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA

Query:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

A0A4U5Q6S3 Uncharacterized protein1.0e-3563.51Show/hide
Query:  VSTGRLVPSADDALLAL--------TGFRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNH-KRCR
        V TGRLVPS  DALLAL          F  I+LAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ    LPRMF + +    G +       ++      
Subjt:  VSTGRLVPSADDALLAL--------TGFRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQ----LPRMFSLIKSESWGLKTIRYRPSLNH-KRCR

Query:  PGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         G+ +VA RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  PGIGNVALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

A0A4U5Q829 Retrotrans_gag domain-containing protein1.9e-2959.86Show/hide
Query:  MVSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNV
        MV TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +V
Subjt:  MVSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNV

Query:  ALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
        A RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  ALRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

A0A4U5QPX7 Uncharacterized protein7.1e-2959.57Show/hide
Query:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA
        V TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +VA
Subjt:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA

Query:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

A0A4U5R5A1 Uncharacterized protein7.1e-2959.57Show/hide
Query:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA
        V TGRLVPS  DALLALTG      F  I+LAFGIGVMINRDSRGHSYFIVR   LG  +           +S++  + TI             G+ +VA
Subjt:  VSTGRLVPSADDALLALTG------FRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVA

Query:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA
         RTPPAPYEKSK LGS GSMVARLKLKGIDGRAP GVEP A
Subjt:  LRTPPAPYEKSKCLGSRGSMVARLKLKGIDGRAPQGVEPEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCACCGGTCGGCTCGTCCCTTCTGCCGACGATGCGCTCCTGGCCTTAACTGGATTTCGATCAATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGA
CAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCCAAGGATGTTTTCATTAATCAAGAGCGAAAGTTGGGGGCTGA
AGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCAATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTGTTTGGGT
TCCAGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACAAGGAGTGGAGCCTGAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCACCGGTCGGCTCGTCCCTTCTGCCGACGATGCGCTCCTGGCCTTAACTGGATTTCGATCAATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGA
CAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCCAAGGATGTTTTCATTAATCAAGAGCGAAAGTTGGGGGCTGA
AGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCAATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTGTTTGGGT
TCCAGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACAAGGAGTGGAGCCTGAGGCTTAA
Protein sequenceShow/hide protein sequence
MVSTGRLVPSADDALLALTGFRSILLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLPRMFSLIKSESWGLKTIRYRPSLNHKRCRPGIGNVALRTPPAPYEKSKCLG
SRGSMVARLKLKGIDGRAPQGVEPEA