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Lag0010783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRrna intron-encoded homing endonuclease
Genome locationchr1:6529856..6530280
RNA-Seq ExpressionLag0010783
SyntenyLag0010783
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051481.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-2878.65Show/hide
Query:  YNLYTSFLEGLWPLRPRMFEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        Y    SFLEGLWPLRPR FEAI          GIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAARDVARS LNLII
Subjt:  YNLYTSFLEGLWPLRPRMFEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

TKR78379.1 uncharacterized protein D5086_0000283000 [Populus alba]8.6e-2688.73Show/hide
Query:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        F+A +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAA DVARS LNLII
Subjt:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

XP_012440607.1 PREDICTED: uncharacterized protein LOC105765883 [Gossypium raimondii]5.0e-2690Show/hide
Query:  EAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        E  +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAARDVARS LNLII
Subjt:  EAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

XP_018501704.1 PREDICTED: uncharacterized protein LOC108866852, partial [Pyrus x bretschneideri]1.1e-2576.4Show/hide
Query:  NLYTSFLEGLWPLRPRMFE-AIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        +L TS+ E +  LR ++    + IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG FAARDVARS LNLII
Subjt:  NLYTSFLEGLWPLRPRMFE-AIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

XP_018505183.1 PREDICTED: uncharacterized protein LOC108867880 [Pyrus x bretschneideri]1.1e-2576.4Show/hide
Query:  NLYTSFLEGLWPLRPRMFE-AIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        +L TS+ E +  LR ++    + IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG FAARDVARS LNLII
Subjt:  NLYTSFLEGLWPLRPRMFE-AIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

TrEMBL top hitse value%identityAlignment
A0A2P5W8Y1 Uncharacterized protein7.9e-2591.04Show/hide
Query:  KIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG  RRG+FAARDVARS LNLII
Subjt:  KIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

A0A4U5PNX9 Uncharacterized protein4.2e-2688.73Show/hide
Query:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        F+A +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAA DVARS LNLII
Subjt:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

A0A4U5R3F9 Uncharacterized protein5.4e-2687.32Show/hide
Query:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        F+A +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAA DVARS LNLI+
Subjt:  FEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

A0A5A7UD54 Reverse transcriptase6.9e-2978.65Show/hide
Query:  YNLYTSFLEGLWPLRPRMFEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        Y    SFLEGLWPLRPR FEAI          GIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAARDVARS LNLII
Subjt:  YNLYTSFLEGLWPLRPRMFEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

A0A5C7H450 Uncharacterized protein7.9e-2591.04Show/hide
Query:  KIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII
        +IIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLL IEWSGEVFG RRRG+FAA DVARS LNLII
Subjt:  KIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGGAATCCCCGTGGGCCTAAATCCCAGGTCTACAATTTATATACCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGATGTTTGAGGCAATAAAGATCAT
TGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACTGATTGAAT
GGTCCGGTGAAGTGTTCGGACCACGGCGACGTGGGCAGTTTGCTGCCCGCGACGTTGCTAGAAGTCTACTGAACCTTATCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGGAATCCCCGTGGGCCTAAATCCCAGGTCTACAATTTATATACCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGATGTTTGAGGCAATAAAGATCAT
TGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACTGATTGAAT
GGTCCGGTGAAGTGTTCGGACCACGGCGACGTGGGCAGTTTGCTGCCCGCGACGTTGCTAGAAGTCTACTGAACCTTATCATTTAG
Protein sequenceShow/hide protein sequence
MRRNPRGPKSQVYNLYTSFLEGLWPLRPRMFEAIKIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLLIEWSGEVFGPRRRGQFAARDVARSLLNLII