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Lag0010784 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010784
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:6537869..6538460
RNA-Seq ExpressionLag0010784
SyntenyLag0010784
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046504.1 hypothetical protein E6C27_scaffold11823G00040 [Cucumis melo var. makuwa]1.4e-1554.17Show/hide
Query:  GTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVATTDVE
        GTCARSA EDAS DYN + + ARFSSWALP SL + RG+L + + GR                  A++REG    EV TR+RGWINHRSVATT VE
Subjt:  GTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVATTDVE

KAA0062869.1 putative transmembrane protein [Cucumis melo var. makuwa]7.1e-1589.8Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL
        +TLSGAPFQGTCARSAAEDASPDYNSD E ARFSSWALPGSL V RGIL
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL

KAE8637537.1 hypothetical protein CSA_017393 [Cucumis sativus]4.9e-4071.88Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
        +TLSGAPFQGTCARSAAEDASPDYNS+ + ARFSSWALPGSL V RGILSRLTWGRVES+V    ++    E  A +R G    E  TR+RGWINHRSVA
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA

Query:  TTDVEDSNFSHPHDGAHGRPACARTCTT
        TT VEDSN SHPHDGAHGRP CA   TT
Subjt:  TTDVEDSNFSHPHDGAHGRPACARTCTT

RDY57549.1 hypothetical protein DX873_18690 [Muricauda nanhaiensis]7.1e-1589.8Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL
        +TLSGAPFQGTCARSAAEDASPDYNSD E ARFSSWALPGSL V RGIL
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]2.7e-1485.71Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL
        +TLSGAPFQGTCARS AEDASPDYNS+ EGARFSSWALPGSL V +GIL
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGIL

TrEMBL top hitse value%identityAlignment
A0A0A0KEK9 Uncharacterized protein2.4e-4069.17Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVA-----WTEVATRYRGWIN
        +TLSGAPFQGTCARSAAEDASPDYNS+ + ARFSSWALPGSL V RGILSRLTWGRVES+V           +  R  EG A       +V TR+RGWIN
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVA-----WTEVATRYRGWIN

Query:  HRSVATTDVEDSNFSHPHDGAHGRPACARTCTT
        HRSVATT VEDSN SHPHDGAHGRP CA   TT
Subjt:  HRSVATTDVEDSNFSHPHDGAHGRPACARTCTT

A0A0A0L1K6 Uncharacterized protein3.7e-3358.62Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
        +TLS  PFQGTCARSAAEDASP YN D + ARFSSWALPGSLVV +G+LS LTWGRVES+   + ++   +E  A +R G    +V TR+R WI H SVA
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA

Query:  TTDVEDSNFSHPHDGAHGRP-ACARTCTTDGSQSARAASNIKRKV
        TT VEDSN SHPHDGAHGRP A   TC      S   A + K ++
Subjt:  TTDVEDSNFSHPHDGAHGRP-ACARTCTTDGSQSARAASNIKRKV

A0A6N2K4T8 Uncharacterized protein5.5e-2149.28Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
        +TLSGAPFQGT A SAAEDASPDYNS+  GARFSSWA PGSL V RGILSRLTWGR ESI+             + +RE    T   T          V 
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA

Query:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGSQSARAAS
         T  EDS    P  GA GRP  A    + G    R  +
Subjt:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGSQSARAAS

A0A6N2KDB0 Uncharacterized protein5.5e-2149.28Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
        +TLSGAPFQGT A SAAEDASPDYNS+  GARFSSWA PGSL V RGILSRLTWGR ESI+             + +RE    T   T          V 
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA

Query:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGSQSARAAS
         T  EDS    P  GA GRP  A    + G    R  +
Subjt:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGSQSARAAS

A0A6N2KNB2 Uncharacterized protein1.0e-1951.91Show/hide
Query:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
        +TLSGAPFQGT A SAAEDASPDYNS+  GARFSSWA PGSL V RGILSRLTWGR ESI+              R R   A      R         V 
Subjt:  VTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA

Query:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGS
         T  EDS    P  GA GRP  A    + GS
Subjt:  TTDVEDSNFSHPHDGAHGRPACARTCTTDGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGCAAAGACAAAAATATCAAGAAGTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGA
CACCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGTCGTTAATAGGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGAGG
ACGACGTTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTTGCGAGAAGGAGTTGCGTGGACTGAGGTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCG
ACGACAGACGTCGAGGACTCGAATTTCAGCCATCCGCACGACGGTGCGCACGGGAGGCCAGCGTGTGCCCGCACCTGCACAACTGATGGATCACAAAGCGCACGGGCCGC
AAGTAATATAAAACGGAAAGTATTCCGAGTATCGAATCCTCAGGGAGGCGAAGCGAAACTTAAGCAAATAATTAAAATTTTCTTGAGCACTGAAAATACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGCAAAGACAAAAATATCAAGAAGTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGA
CACCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGTCGTTAATAGGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGAGG
ACGACGTTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTTGCGAGAAGGAGTTGCGTGGACTGAGGTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCG
ACGACAGACGTCGAGGACTCGAATTTCAGCCATCCGCACGACGGTGCGCACGGGAGGCCAGCGTGTGCCCGCACCTGCACAACTGATGGATCACAAAGCGCACGGGCCGC
AAGTAATATAAAACGGAAAGTATTCCGAGTATCGAATCCTCAGGGAGGCGAAGCGAAACTTAAGCAAATAATTAAAATTTTCTTGAGCACTGAAAATACTTAG
Protein sequenceShow/hide protein sequence
MKRQRQKYQEVTLSGAPFQGTCARSAAEDASPDYNSDTEGARFSSWALPGSLVVNRGILSRLTWGRVESIVFEDDVQRVDIEVLARLREGVAWTEVATRYRGWINHRSVA
TTDVEDSNFSHPHDGAHGRPACARTCTTDGSQSARAASNIKRKVFRVSNPQGGEAKLKQIIKIFLSTENT