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Lag0010800 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010800
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:7027597..7028007
RNA-Seq ExpressionLag0010800
SyntenyLag0010800
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7535395.1 Endonuclease/exonuclease/phosphatase superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.0e-0934.71Show/hide
Query:  IDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFS
        ID +W +S   SG+GW +V  NGN +  G +   +CL+ LH E  SLLW +     L+I  +V  +DCL+L  +++     P  F    ++ S + S F 
Subjt:  IDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFS

Query:  MCLLYFVRREYNVKVHRLASK
          +L F+ R YN +   LA K
Subjt:  MCLLYFVRREYNVKVHRLASK

KAG7597691.1 Ribonuclease H domain [Arabidopsis suecica]3.7e-0833.61Show/hide
Query:  WIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEF
        ++D +W  S   SG+GW     NG     GA    + L+ LHAE  +LLW + C  G +   +   +DC  LV IV+     P  F    +E      EF
Subjt:  WIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEF

Query:  SMCLLYFVRREYNVKVHRLASK
        S   L  + R  NVK   LA K
Subjt:  SMCLLYFVRREYNVKVHRLASK

PWA73584.1 hypothetical protein CTI12_AA146360 [Artemisia annua]2.9e-0834.45Show/hide
Query:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM
        DAAW K S   GLG+     NG+    GAK      + + AE  ++ W    AR     ++V  SD L L++ +  + S PLE   +F +I     +F++
Subjt:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM

Query:  CLLYFVRREYNVKVHRLAS
        C   FVRRE N+  H +AS
Subjt:  CLLYFVRREYNVKVHRLAS

XP_010418809.1 PREDICTED: uncharacterized protein LOC104704411 [Camelina sativa]4.9e-0832.5Show/hide
Query:  WIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEF
        ++D +W  +   SG GW  V P G+    GA    + L+ LHAE  +L+W + C  G +  S+V  +DC  LV +V+     P  F P  +++     EF
Subjt:  WIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEF

Query:  SMCLLYFVRREYNVKVHRLA
        +   L +V R  N K  +LA
Subjt:  SMCLLYFVRREYNVKVHRLA

XP_024008027.1 uncharacterized protein LOC112084014 [Eutrema salsugineum]4.4e-0940.95Show/hide
Query:  QKWPELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEIS
        Q++P   +DA+W ++ L SGLGW L R N +EE  G +   + L++LHAE  SLLW + CAR   I S+  ++DCL LV +V   +  P  F  +  EI 
Subjt:  QKWPELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEIS

Query:  KVLSE
        + L E
Subjt:  KVLSE

TrEMBL top hitse value%identityAlignment
A0A2U1NJ84 RNase H domain-containing protein1.4e-0834.45Show/hide
Query:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM
        DAAW K S   GLG+     NG+    GAK      + + AE  ++ W    AR     ++V  SD L L++ +  + S PLE   +F +I     +F++
Subjt:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM

Query:  CLLYFVRREYNVKVHRLAS
        C   FVRRE N+  H +AS
Subjt:  CLLYFVRREYNVKVHRLAS

A0A2U1NRM9 Uncharacterized protein1.1e-0531.93Show/hide
Query:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM
        DAAW K S   G+G+     NG     GA+      + L AE  ++ W    A+      +V  SD L LV  +  + S PL+   +F +I      FS 
Subjt:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM

Query:  CLLYFVRREYNVKVHRLAS
        C   FV+RE N+  H +A+
Subjt:  CLLYFVRREYNVKVHRLAS

A0A2U1P7N0 Uncharacterized protein1.9e-0531.93Show/hide
Query:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM
        DAAW K S   G+G+     NG     GA+      + L AE  ++ W    A+      +V  SD L LV  +  + S PL+   +F +I      FS 
Subjt:  DAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSM

Query:  CLLYFVRREYNVKVHRLAS
        C   FV+RE N+  H +A+
Subjt:  CLLYFVRREYNVKVHRLAS

A0A3P6DT82 RNase H domain-containing protein (Fragment)6.4e-0632.52Show/hide
Query:  PELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVL
        P   IDA+W  +   SGLGW L    G  E  G +   + L++LHAE   LLW   C R + I S+   +DC  LVD+    +  P  F    +E  ++ 
Subjt:  PELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVL

Query:  SEFSMCLLYFVRREYNVKVHRLA
         +F    L  + R  N +   LA
Subjt:  SEFSMCLLYFVRREYNVKVHRLA

A0A6J0LNL7 uncharacterized protein LOC1088326184.9e-0631.36Show/hide
Query:  IDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFS
        +DA+W ++S   G+G+ L      E   G ++G +  + LHAE  +L W +   R   +  ++  SDC +LV I+  K   P   +P  D+I  ++S F+
Subjt:  IDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFS

Query:  MCLLYFVRREYNVKVHRL
        M  L F+ R  NV+   L
Subjt:  MCLLYFVRREYNVKVHRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.6e-0925.58Show/hide
Query:  KWPELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISK
        +W +   DA W++ +   G+GW L    G  +  GA+   K  + L AE  ++ W +          ++  SD   L++I+N     P   +P   ++ +
Subjt:  KWPELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISK

Query:  VLSEFSMCLLYFVRREYNVKVHRLASKDL
        +LS+F+     F+ RE N    R+A + L
Subjt:  VLSEFSMCLLYFVRREYNVKVHRLASKDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGTGGCCCGAGTTGTGGATCGATGCTGCATGGGATAAGTCGTCTTTGAACTCTGGGTTGGGATGGTGTTTGGTGAGACCTAATGGGAATGAGGAAGCTGAGGG
TGCGAAAGAGGGAGGAAAATGTTTGAATAGTCTTCATGCGGAAGGTGGATCATTGTTATGGGGTTTATACTGCGCTCGTGGATTGAATATCGGAAGTCTTGTAGTGCGAT
CCGATTGTTTGAAGCTAGTAGATATTGTCAATGGGAAAGTGTCATGCCCACTCGAGTTTGAGCCCATTTTCGATGAAATTAGTAAAGTATTGAGTGAATTTTCCATGTGT
CTGTTGTACTTTGTCAGACGTGAGTATAATGTGAAGGTGCATCGCCTGGCCAGTAAAGACCTATGTAATCTCATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGTGGCCCGAGTTGTGGATCGATGCTGCATGGGATAAGTCGTCTTTGAACTCTGGGTTGGGATGGTGTTTGGTGAGACCTAATGGGAATGAGGAAGCTGAGGG
TGCGAAAGAGGGAGGAAAATGTTTGAATAGTCTTCATGCGGAAGGTGGATCATTGTTATGGGGTTTATACTGCGCTCGTGGATTGAATATCGGAAGTCTTGTAGTGCGAT
CCGATTGTTTGAAGCTAGTAGATATTGTCAATGGGAAAGTGTCATGCCCACTCGAGTTTGAGCCCATTTTCGATGAAATTAGTAAAGTATTGAGTGAATTTTCCATGTGT
CTGTTGTACTTTGTCAGACGTGAGTATAATGTGAAGGTGCATCGCCTGGCCAGTAAAGACCTATGTAATCTCATTGAATGA
Protein sequenceShow/hide protein sequence
MQKWPELWIDAAWDKSSLNSGLGWCLVRPNGNEEAEGAKEGGKCLNSLHAEGGSLLWGLYCARGLNIGSLVVRSDCLKLVDIVNGKVSCPLEFEPIFDEISKVLSEFSMC
LLYFVRREYNVKVHRLASKDLCNLIE