; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:7063848..7064894
RNA-Seq ExpressionLag0010807
SyntenyLag0010807
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.9e-4142.93Show/hide
Query:  MRKTFKSAWNIP-SSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF
        ++ T K AW +   +  V+ I  NIFLF      D  R++R GPW FD+ L+++  PV + KP+DM+F+    WVHF  L +   N +MA RLGNAIG F
Subjt:  MRKTFKSAWNIP-SSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF

Query:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN-QYGMWMLYSSRSST
        E+ ++    + W   LRV+V  D+ KPL R IK+NLDGPMG CW PI YE+LP+    CG + H++KDCS        S  KN QYG W+ +    ++
Subjt:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN-QYGMWMLYSSRSST

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.0e-4647.83Show/hide
Query:  AWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGR
        AW +   L VE I  N+FLF    E D+ RV++ GPW FDK L+VL KP       ++EF    FW+H   LPM   N +MA RLGNAIG F + D   +
Subjt:  AWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGR

Query:  RYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSA-FFQGEGSSEQKNQYGMWMLY
         + W  SLR++V+IDI+KPLRR IK+N+DGPMG CW PI YE+LP+ C FCG+IGH   DC A +   +  S   ++YG W+ +
Subjt:  RYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSA-FFQGEGSSEQKNQYGMWMLY

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.2e-3740.84Show/hide
Query:  MRKTFKSAWNIPSSLI-VEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF
        M+ T ++AW + ++   V+ +  N+FLF+     D  ++ + GPW FD+ L++++KPV ++ P +++F   P WV F  LP+      MA RLGNA+G F
Subjt:  MRKTFKSAWNIPSSLI-VEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF

Query:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLY
        EE D       W  +LRV+V++DISKPLRR IK+NLDGP+G  W PI YE+LP+ C  CG+                SS +K+QYG W+ Y
Subjt:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLY

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]8.9e-3037.7Show/hide
Query:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF-
        M+ T  S W     + V  I  N+F+F      D  RV+  GPW FDK LL+L +  P V+P D++     FWVH C LP+ L N  + E +GNA+G+F 
Subjt:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF-

Query:  -EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC-SAFFQGEGSSEQKNQYGMWM
          +Y++GG    W  ++R++V +D+ KPLRR +K+ L       W    YE+LP  C FCG +GH  ++C       +GS     QYG W+
Subjt:  -EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC-SAFFQGEGSSEQKNQYGMWM

XP_031090838.1 uncharacterized protein LOC115995827 [Ipomoea triloba]6.8e-3035.05Show/hide
Query:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE
        MR T  + W     + V+++  NIFLF    E D+ R++  GPW F+K LL+L++  P + P+ M+   + FW+    LPM  ++   A+ +G+ IG+F 
Subjt:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE

Query:  EYDNGGRRYGWKES-LRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLYSSRSSTLFR
          D      GW  S LR++V ID++KPL   +++  +G   S W    YE+LP  C  CG+IGH  K C   F+G   + +K+ YG WM  ++R      
Subjt:  EYDNGGRRYGWKES-LRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLYSSRSSTLFR

Query:  SPNTSPINPNRMLI
           TSP + NR L+
Subjt:  SPNTSPINPNRMLI

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.9e-4142.93Show/hide
Query:  MRKTFKSAWNIP-SSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF
        ++ T K AW +   +  V+ I  NIFLF      D  R++R GPW FD+ L+++  PV + KP+DM+F+    WVHF  L +   N +MA RLGNAIG F
Subjt:  MRKTFKSAWNIP-SSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF

Query:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN-QYGMWMLYSSRSST
        E+ ++    + W   LRV+V  D+ KPL R IK+NLDGPMG CW PI YE+LP+    CG + H++KDCS        S  KN QYG W+ +    ++
Subjt:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN-QYGMWMLYSSRSST

A0A6J1DU55 uncharacterized protein LOC1110231351.9e-4647.83Show/hide
Query:  AWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGR
        AW +   L VE I  N+FLF    E D+ RV++ GPW FDK L+VL KP       ++EF    FW+H   LPM   N +MA RLGNAIG F + D   +
Subjt:  AWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGR

Query:  RYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSA-FFQGEGSSEQKNQYGMWMLY
         + W  SLR++V+IDI+KPLRR IK+N+DGPMG CW PI YE+LP+ C FCG+IGH   DC A +   +  S   ++YG W+ +
Subjt:  RYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSA-FFQGEGSSEQKNQYGMWMLY

A0A6J1DX30 uncharacterized protein LOC1110248745.6e-3840.84Show/hide
Query:  MRKTFKSAWNIPSSLI-VEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF
        M+ T ++AW + ++   V+ +  N+FLF+     D  ++ + GPW FD+ L++++KPV ++ P +++F   P WV F  LP+      MA RLGNA+G F
Subjt:  MRKTFKSAWNIPSSLI-VEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRF

Query:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLY
        EE D       W  +LRV+V++DISKPLRR IK+NLDGP+G  W PI YE+LP+ C  CG+                SS +K+QYG W+ Y
Subjt:  EEYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLY

A0A803LAB8 Uncharacterized protein1.4e-2836.73Show/hide
Query:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE
        M+ T  S W +  ++I++ +E N+F+F   +E D  +VI   PW FD  LLVL +     +P ++EFK++P WV    +P +  N      +G+ +G F 
Subjt:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE

Query:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN---QYGMWMLYSSR
        E D+     GW E LR++V+IDI+KPLRR + +   GP  S W  + YE+L E C FCG + H    CS  F+ E      +   QYG W+  S R
Subjt:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN---QYGMWMLYSSR

A0A803LK12 Uncharacterized protein3.1e-2837.11Show/hide
Query:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE
        M++  K  W +   + V  I++N+F+F   +EED +RV+   PW FDK +L+L       +P ++ F+  PFWV    +     N + A  +G+A+G F 
Subjt:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE

Query:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN---QYGMWMLYS
        EYD      GW E +R++V++DI+KPLRR IKV   GP  S W    YE+L +   FCG +GH+ KDC    + E   E+++   QYG +M+ S
Subjt:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKN---QYGMWMLYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding6.8e-1222.02Show/hide
Query:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE
        + +  +  W     + V  +    F+     EE+ +  +  GPW      L++        P+  +   +P WV    +P + Y+  +   +   +GR  
Subjt:  MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFE

Query:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC
        + D     +      RV + ++++KPL+  + +N D         + YE L ++CS CGI GH+V  C
Subjt:  EYDNGGRRYGWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC

AT3G31430.1 unknown protein8.1e-1330.13Show/hide
Query:  FLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGRRYGWKESLRVQVIIDIS
        F+FTL  EE L  V+R+GPW F+ ++++L +  P + P+   F + PFWV    +P    N  + E +G A+G+  + D         +  RV +  DI+
Subjt:  FLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGRRYGWKESLRVQVIIDIS

Query:  KPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQ
         PLR          + +      YE+L   C  CG++ H   D  A     G  EQ
Subjt:  KPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQ

AT3G42140.1 zinc ion binding;nucleic acid binding2.1e-0823.9Show/hide
Query:  NIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGRRY
        N+   ++   +E +   F   SEE +  ++R+GPW F+ ++ V+ +   +    D EFK  PFW+    +P+      +   +G  +G F E  N GR  
Subjt:  NIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGRRY

Query:  GWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC
                    D+S                       YEKL   C+ CG++ H   +C
Subjt:  GWKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAAACGTTTAAATCTGCATGGAACATTCCTTCTAGTCTGATAGTGGAAAAGATTGAGACTAACATTTTTCTTTTCACGCTTATATCAGAGGAGGATCTTGTTCG
GGTAATTCGCCAGGGGCCATGGCTGTTTGATAAATTTCTTCTTGTTTTATCTAAGCCAGTGCCGATGGTAAAACCTATTGATATGGAGTTCAAATACTCACCTTTCTGGG
TCCATTTCTGCCAATTGCCAATGGATTTATACAATAATTCGATGGCAGAGAGACTGGGAAACGCGATAGGTAGATTTGAAGAATACGATAATGGTGGTCGACGTTACGGG
TGGAAAGAGAGCTTGCGCGTGCAAGTGATAATTGATATATCCAAGCCGCTTCGTCGATGCATCAAGGTCAATCTAGATGGACCGATGGGAAGTTGTTGGGCACCTATCCA
TTACGAGAAACTCCCAGAATTATGTTCATTTTGTGGCATAATTGGGCACGTTGTGAAGGATTGCAGTGCTTTTTTCCAGGGGGAGGGTTCGTCGGAGCAGAAAAATCAAT
ATGGTATGTGGATGTTGTATTCTAGTAGGTCTTCGACTCTGTTTCGATCTCCAAATACCAGTCCCATTAACCCGAATCGCATGCTGATTGATAGAGAATCATGGAGACAA
AGAGATCCGTCTTCATCTCTAAAACTTTTTCATACAGGGGGACCGTCCAGCGGGAGGAAAGAAGAGGGACAATCGTCGTCGGTGGACCTATTTGGCGCGAAGTTGATGGA
CATCTCTCCTATTGTCGAGGAATCAATTGCAGTTACGAAAATCATGCCAGCATTCAATAATCCCAATAATGGCGAAGGTTTGGTTACAAAGGTAACAACAACATTGAAGG
CTAAAAAGAAGTTAGAGTATGCGGCATCCAGTGAGGAACAATTAAAGCCAACTTTGAATGAAAATTCCTCAATTTTCAATCAACAATCGAGGACCTTTCAATTTGAAACA
AAAAAGACACAACCCGTCAGTTACGCCTATTCCTTTGAGGCGCTACTGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAAACGTTTAAATCTGCATGGAACATTCCTTCTAGTCTGATAGTGGAAAAGATTGAGACTAACATTTTTCTTTTCACGCTTATATCAGAGGAGGATCTTGTTCG
GGTAATTCGCCAGGGGCCATGGCTGTTTGATAAATTTCTTCTTGTTTTATCTAAGCCAGTGCCGATGGTAAAACCTATTGATATGGAGTTCAAATACTCACCTTTCTGGG
TCCATTTCTGCCAATTGCCAATGGATTTATACAATAATTCGATGGCAGAGAGACTGGGAAACGCGATAGGTAGATTTGAAGAATACGATAATGGTGGTCGACGTTACGGG
TGGAAAGAGAGCTTGCGCGTGCAAGTGATAATTGATATATCCAAGCCGCTTCGTCGATGCATCAAGGTCAATCTAGATGGACCGATGGGAAGTTGTTGGGCACCTATCCA
TTACGAGAAACTCCCAGAATTATGTTCATTTTGTGGCATAATTGGGCACGTTGTGAAGGATTGCAGTGCTTTTTTCCAGGGGGAGGGTTCGTCGGAGCAGAAAAATCAAT
ATGGTATGTGGATGTTGTATTCTAGTAGGTCTTCGACTCTGTTTCGATCTCCAAATACCAGTCCCATTAACCCGAATCGCATGCTGATTGATAGAGAATCATGGAGACAA
AGAGATCCGTCTTCATCTCTAAAACTTTTTCATACAGGGGGACCGTCCAGCGGGAGGAAAGAAGAGGGACAATCGTCGTCGGTGGACCTATTTGGCGCGAAGTTGATGGA
CATCTCTCCTATTGTCGAGGAATCAATTGCAGTTACGAAAATCATGCCAGCATTCAATAATCCCAATAATGGCGAAGGTTTGGTTACAAAGGTAACAACAACATTGAAGG
CTAAAAAGAAGTTAGAGTATGCGGCATCCAGTGAGGAACAATTAAAGCCAACTTTGAATGAAAATTCCTCAATTTTCAATCAACAATCGAGGACCTTTCAATTTGAAACA
AAAAAGACACAACCCGTCAGTTACGCCTATTCCTTTGAGGCGCTACTGAAAAAATGA
Protein sequenceShow/hide protein sequence
MRKTFKSAWNIPSSLIVEKIETNIFLFTLISEEDLVRVIRQGPWLFDKFLLVLSKPVPMVKPIDMEFKYSPFWVHFCQLPMDLYNNSMAERLGNAIGRFEEYDNGGRRYG
WKESLRVQVIIDISKPLRRCIKVNLDGPMGSCWAPIHYEKLPELCSFCGIIGHVVKDCSAFFQGEGSSEQKNQYGMWMLYSSRSSTLFRSPNTSPINPNRMLIDRESWRQ
RDPSSSLKLFHTGGPSSGRKEEGQSSSVDLFGAKLMDISPIVEESIAVTKIMPAFNNPNNGEGLVTKVTTTLKAKKKLEYAASSEEQLKPTLNENSSIFNQQSRTFQFET
KKTQPVSYAYSFEALLKK