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Lag0010816 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010816
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCytochrome c oxidase subunit 1
Genome locationchr1:7171773..7172540
RNA-Seq ExpressionLag0010816
SyntenyLag0010816
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC78929.1 hypothetical protein [Vicia faba]1.4e-3572.22Show/hide
Query:  MDLDLMMESESFSSST----SSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHGPNSWVCQE
        M L    E  SF SST    SSTRSDAQSAPPE ERVFDRIC+EY EWVVRA K +PPEW+MP LVR VIGDEAIH+PGF+ +SY DVML+G NSW+C E
Subjt:  MDLDLMMESESFSSST----SSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHGPNSWVCQE

Query:  VFQFLDLI
        VFQFLDLI
Subjt:  VFQFLDLI

CAB4075868.1 unnamed protein product [Lactuca saligna]1.4e-3763.33Show/hide
Query:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH
        L+G+PTP DL+ M++      S   S++ SSTRSDAQSAPPE ER+F+RICNEY EWVV ADK +PPEW+MPDLVRAVIG+EA+  P +++++YYDVMLH
Subjt:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH

Query:  GPNSWVCQEVFQFLDLINFV
        G NSW+CQ + +FLDLIN+V
Subjt:  GPNSWVCQEVFQFLDLINFV

CAB4089459.1 unnamed protein product [Lactuca saligna]5.5e-3762.5Show/hide
Query:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH
        L+G+PTP DL+ M++      S   S++ SSTRSDAQSAPPE ER+F+RICNEY EWVV ADK +PPEW+MP+LVRAVIG+EA+  P +++++YYDVMLH
Subjt:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH

Query:  GPNSWVCQEVFQFLDLINFV
        G NSW+CQ + +FLDLIN+V
Subjt:  GPNSWVCQEVFQFLDLINFV

KAE9584295.1 hypothetical protein Lalb_Chr00c24g0406991 [Lupinus albus]3.9e-3561.34Show/hide
Query:  LLLHGNPTPMDLDLMMESE---SFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHG
        L L GNPTP D + ++E+E   SFSSSTSSTRSDAQSAPPECE V  +IC+E  +WV R+ + +PPEW MPDLVRAVI D+ I  PGFLT  Y DV+LHG
Subjt:  LLLHGNPTPMDLDLMMESE---SFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHG

Query:  PNSWVCQEVFQFLDLINFV
         N+W+C+++F F+DLI++V
Subjt:  PNSWVCQEVFQFLDLINFV

QXI86679.1 hypothetical protein [Lactuca sativa var. capitata]8.5e-3861.79Show/hide
Query:  KLLLHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDV
        ++ L+G+PTP DL+ M++      S   S++ SSTRSDAQSAPPE ER+F+RICNEY EWVV ADK +PPEW+MPDLVRAVIG+EA+  P +++++YYDV
Subjt:  KLLLHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDV

Query:  MLHGPNSWVCQEVFQFLDLINFV
        MLHG NSW+CQ + +FLDLIN+V
Subjt:  MLHGPNSWVCQEVFQFLDLINFV

TrEMBL top hitse value%identityAlignment
A0A068V9R0 Uncharacterized protein1.9e-3557.94Show/hide
Query:  HENKLLLHGNPTPMDLDLM------MESESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESY
        ++ +++L+G+ T  D+D M        S S +++  ST SDAQSAPPE ERVFDRIC+EY E V++A K +PPEW MPDLVR V+G+E   +PGFLT SY
Subjt:  HENKLLLHGNPTPMDLDLM------MESESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESY

Query:  YDVMLHGPNSWVCQEVFQFLDLINFV
        YD+MLHG NSW+CQE+F+FLDLIN+V
Subjt:  YDVMLHGPNSWVCQEVFQFLDLINFV

A0A6A4N0Z2 Uncharacterized protein1.9e-3561.34Show/hide
Query:  LLLHGNPTPMDLDLMMESE---SFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHG
        L L GNPTP D + ++E+E   SFSSSTSSTRSDAQSAPPECE V  +IC+E  +WV R+ + +PPEW MPDLVRAVI D+ I  PGFLT  Y DV+LHG
Subjt:  LLLHGNPTPMDLDLMMESE---SFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHG

Query:  PNSWVCQEVFQFLDLINFV
         N+W+C+++F F+DLI++V
Subjt:  PNSWVCQEVFQFLDLINFV

A0A6S7L3W9 Uncharacterized protein7.0e-3863.33Show/hide
Query:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH
        L+G+PTP DL+ M++      S   S++ SSTRSDAQSAPPE ER+F+RICNEY EWVV ADK +PPEW+MPDLVRAVIG+EA+  P +++++YYDVMLH
Subjt:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH

Query:  GPNSWVCQEVFQFLDLINFV
        G NSW+CQ + +FLDLIN+V
Subjt:  GPNSWVCQEVFQFLDLINFV

A0A6S7MSV7 Uncharacterized protein2.7e-3762.5Show/hide
Query:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH
        L+G+PTP DL+ M++      S   S++ SSTRSDAQSAPPE ER+F+RICNEY EWVV ADK +PPEW+MP+LVRAVIG+EA+  P +++++YYDVMLH
Subjt:  LHGNPTPMDLDLMME------SESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLH

Query:  GPNSWVCQEVFQFLDLINFV
        G NSW+CQ + +FLDLIN+V
Subjt:  GPNSWVCQEVFQFLDLINFV

R4IUT9 Uncharacterized protein6.6e-3672.22Show/hide
Query:  MDLDLMMESESFSSST----SSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHGPNSWVCQE
        M L    E  SF SST    SSTRSDAQSAPPE ERVFDRIC+EY EWVVRA K +PPEW+MP LVR VIGDEAIH+PGF+ +SY DVML+G NSW+C E
Subjt:  MDLDLMMESESFSSST----SSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVRAVIGDEAIHMPGFLTESYYDVMLHGPNSWVCQE

Query:  VFQFLDLI
        VFQFLDLI
Subjt:  VFQFLDLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTTGATTTCTCGGTTCGACTCCGATTAAGGGCTTTCTTCTCTAACGAGATTTTTTCACCCCCGACAAGTCTTTCTTCATTTTTCGAGCAGGGATGGCATGAAAA
TAAACTTTTACTCCATGGGAATCCAACCCCCATGGATTTAGATTTGATGATGGAATCAGAGTCTTTCTCATCAAGTACCTCGTCAACTAGGTCGGACGCGCAAAGCGCTC
CACCTGAGTGTGAGCGGGTATTTGATAGAATCTGTAATGAATACCAGGAGTGGGTGGTGAGAGCCGATAAGAACATACCCCCAGAATGGAACATGCCTGACCTTGTTCGG
GCGGTGATTGGGGACGAGGCGATTCACATGCCAGGCTTTCTCACGGAGTCCTATTATGATGTGATGTTACATGGGCCAAATAGTTGGGTATGCCAAGAGGTTTTTCAGTT
TCTGGATCTAATAAACTTTGTCTTGATATGTCGGTGTAAAAGATTGAGTGGGATCAGTGAGGGTGGTTGTAAATCACTAGGTAGCCCGTCTTTACTTAACTCGGCCCAAG
CAATGCCCAAAGACTCCCATGCCTTTCTTGTTCCACTAGCTAGGAGCAAATTCTCAGATGTCTCTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTG
GAAACTTCGTTTTTTTCATTCTTTTTTTATGAGGTCGTCTCGTGTACAACAACCTTAACCGCACAAGCCTGGGCTGGGCCTACCTCCATTCCTAGAGGAGCCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTTGATTTCTCGGTTCGACTCCGATTAAGGGCTTTCTTCTCTAACGAGATTTTTTCACCCCCGACAAGTCTTTCTTCATTTTTCGAGCAGGGATGGCATGAAAA
TAAACTTTTACTCCATGGGAATCCAACCCCCATGGATTTAGATTTGATGATGGAATCAGAGTCTTTCTCATCAAGTACCTCGTCAACTAGGTCGGACGCGCAAAGCGCTC
CACCTGAGTGTGAGCGGGTATTTGATAGAATCTGTAATGAATACCAGGAGTGGGTGGTGAGAGCCGATAAGAACATACCCCCAGAATGGAACATGCCTGACCTTGTTCGG
GCGGTGATTGGGGACGAGGCGATTCACATGCCAGGCTTTCTCACGGAGTCCTATTATGATGTGATGTTACATGGGCCAAATAGTTGGGTATGCCAAGAGGTTTTTCAGTT
TCTGGATCTAATAAACTTTGTCTTGATATGTCGGTGTAAAAGATTGAGTGGGATCAGTGAGGGTGGTTGTAAATCACTAGGTAGCCCGTCTTTACTTAACTCGGCCCAAG
CAATGCCCAAAGACTCCCATGCCTTTCTTGTTCCACTAGCTAGGAGCAAATTCTCAGATGTCTCTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTG
GAAACTTCGTTTTTTTCATTCTTTTTTTATGAGGTCGTCTCGTGTACAACAACCTTAACCGCACAAGCCTGGGCTGGGCCTACCTCCATTCCTAGAGGAGCCGTATGA
Protein sequenceShow/hide protein sequence
MRLDFSVRLRLRAFFSNEIFSPPTSLSSFFEQGWHENKLLLHGNPTPMDLDLMMESESFSSSTSSTRSDAQSAPPECERVFDRICNEYQEWVVRADKNIPPEWNMPDLVR
AVIGDEAIHMPGFLTESYYDVMLHGPNSWVCQEVFQFLDLINFVLICRCKRLSGISEGGCKSLGSPSLLNSAQAMPKDSHAFLVPLARSKFSDVSFVITTFFFDVKDQKL
ETSFFSFFFYEVVSCTTTLTAQAWAGPTSIPRGAV