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Lag0010821 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010821
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpeptide chain release factor PrfB2, chloroplastic
Genome locationchr1:7216355..7218065
RNA-Seq ExpressionLag0010821
SyntenyLag0010821
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159815.1 peptide chain release factor PrfB2, chloroplastic isoform X1 [Momordica charantia]7.4e-1181.4Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKA++WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
XP_022159817.1 peptide chain release factor PrfB2, chloroplastic isoform X2 [Momordica charantia]7.4e-1181.4Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKA++WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
XP_022931672.1 peptide chain release factor PrfB2, chloroplastic [Cucurbita moschata]2.0e-1183.72Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
XP_022989394.1 peptide chain release factor PrfB2, chloroplastic [Cucurbita maxima]2.0e-1183.72Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
XP_023531900.1 peptide chain release factor PrfB2, chloroplastic [Cucurbita pepo subsp. pepo]2.0e-1183.72Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
TrEMBL top hitse value%identityAlignment
A0A1S4DY60 peptide chain release factor PrfB2, chloroplastic4.7e-1181.4Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIM +++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
A0A6J1DZU3 peptide chain release factor PrfB2, chloroplastic isoform X13.6e-1181.4Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKA++WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
A0A6J1E0V5 peptide chain release factor PrfB2, chloroplastic isoform X23.6e-1181.4Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKA++WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
A0A6J1EUC0 peptide chain release factor PrfB2, chloroplastic9.5e-1283.72Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
A0A6J1JP75 peptide chain release factor PrfB2, chloroplastic9.5e-1283.72Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
        QWKKLMMRLELLSVELNKAD+WDD AHA KIS+EHGSIMG+++
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVR
SwissProt top hitse value%identityAlignment
F4I532 Peptide chain release factor PrfB2, chloroplastic5.9e-1163.64Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVRG
        QWKKL++RL++LS ELNK+D+WDD  HA KIS+EHGS+ G+++G
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVRG
Arabidopsis top hitse value%identityAlignment
AT1G56350.1 Peptide chain release factor 24.2e-1263.64Show/hide
Query:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVRG
        QWKKL++RL++LS ELNK+D+WDD  HA KIS+EHGS+ G+++G
Subjt:  QWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVRG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACTTCTCCAGGACATGCAAATCACTCAACTCTGTATCTCATCCAGAACTTGAATTTGCAGGCGAAAGGGAAGAAAGGAATGGCGATCAACTCATACAGAGGCAG
CAAACTAAAGCTTAGAGGTAAAGAGCTTCAAATAGGGATTGTTGATCAGTGGAAGAAGCTGATGATGAGATTGGAGTTGTTGTCGGTGGAGTTGAACAAGGCTGATGTGT
GGGATGATGTTGCACATGCAAGGAAGATAAGTCAGGAGCATGGTTCAATTATGGGTCGTGTTCGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACTTCTCCAGGACATGCAAATCACTCAACTCTGTATCTCATCCAGAACTTGAATTTGCAGGCGAAAGGGAAGAAAGGAATGGCGATCAACTCATACAGAGGCAG
CAAACTAAAGCTTAGAGGTAAAGAGCTTCAAATAGGGATTGTTGATCAGTGGAAGAAGCTGATGATGAGATTGGAGTTGTTGTCGGTGGAGTTGAACAAGGCTGATGTGT
GGGATGATGTTGCACATGCAAGGAAGATAAGTCAGGAGCATGGTTCAATTATGGGTCGTGTTCGAGGCTAA
Protein sequenceShow/hide protein sequence
MSTSPGHANHSTLYLIQNLNLQAKGKKGMAINSYRGSKLKLRGKELQIGIVDQWKKLMMRLELLSVELNKADVWDDVAHARKISQEHGSIMGRVRG