; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010828 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010828
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr1:7342669..7346153
RNA-Seq ExpressionLag0010828
SyntenyLag0010828
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.3e-9644.55Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------
        MI N IRAQYGGP Q S +YSKPYTKRIDNLR P+GYQP KFQQFDGKGNPKQHI +FVETCENAG+RGD LV+QFVR+LK                   
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------

Query:  -------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IE
                                       EM           +L GIKPRTFEELATRAHDM+LSIA+R  +D L+   R +     +T       + 
Subjt:  -------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IE

Query:  ESMVVNTTLPKSSS-----KEKRQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLK
        ESM+V  T  KS S     K KR  DG      TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFVLK
Subjt:  ESMVVNTTLPKSSS-----KEKRQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLK

Query:  DLILKLAMERKIELDLDEVTQSN--------------------------------LATIKEK---SKHQRKKDPKKLQPKR-----KKSKKFSQPQQL--
        +LI KLA E KIELD+DEV Q+N                                L   ++K   S  Q K++P + + +       +S     P+++  
Subjt:  DLILKLAMERKIELDLDEVTQSN--------------------------------LATIKEK---SKHQRKKDPKKLQPKR-----KKSKKFSQPQQL--

Query:  -------------NEY-------------------------------------GRDKEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQ
                     N Y                                        KEENQC T T+ + SAF+RLS+S SKK R ST  FDRLK+TNDQ
Subjt:  -------------NEY-------------------------------------GRDKEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQ

Query:  PKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         +R+M  L+ K F E N D K+HSR+PSRMKRK SV INTEGSL +K  F
Subjt:  PKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-10044.29Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQYGGP Q S +YSK YTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEKRQTDGAHH-------LTLKERQKKIYPFPDADIPDM
        FEELATRAHDMELSIA+R  +D L+   R +     +T       + ESM+V  T  KS SK K +    +H        TL+ERQKK+YPFPD+D+ DM
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEKRQTDGAHH-------LTLKERQKKIYPFPDADIPDM

Query:  LEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN------------------------------
        LEQL+E QLI+LPKCKRPE+  KVDDP YCKYHRVI H VE+CFVLK+LILKL  E KIELD+DEV Q+N                              
Subjt:  LEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN------------------------------

Query:  ------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ------------
                                                                 I  K K +R K   K +P + K + F QP+Q            
Subjt:  ------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ------------

Query:  LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSV
        L ++ ++                                                           +EENQC TST TR SAF+ LS+STSKK R STS 
Subjt:  LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSV

Query:  FDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
        FDRLK+ NDQ +R+M +L++K F E N D K+HSR+PSRMKRK SV INTEGSL +K  F
Subjt:  FDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-9643.67Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQY GP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD
        FEELATRAHDMELSIA+R  +D L+   R  G+N+           + ESM+V  T  KS SK K     R  DG      TL+ERQKK+Y FPD+D+ D
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD

Query:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------
        MLEQL++ QLI+L +CKRPE+  KVDDP YCKYH VI H VE+CFVLK+LILKLA E KIELD+DEV Q+N                             
Subjt:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------

Query:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------
                                                                  I  K K +R K   K +P + K + F QP++           
Subjt:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------

Query:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS
         L ++  +                                                           +E+NQC TST+ R SAF+RLS+STSKK R STS
Subjt:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS

Query:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         FDRLK+TNDQ +R+M +L+ K F E N D K+H+R+PSRMKRK SV INTEGSL +K  F
Subjt:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-9845.96Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------
        MI + I+ QYGGP Q   LY KPYTKRIDNLR P GYQPPKFQQFDGKGNPKQH+A+F++TCE AGTRGDLLVKQFVRTLK                   
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------

Query:  ---------------------------------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQ
                                                                 EM           +L GIKPRTFEELATRAHDMELSIA+R  +
Subjt:  ---------------------------------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQ

Query:  DLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEM
        D L+P  R +    ++T       I+ESMVV+ T  KS SK K     R+ DG      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ 
Subjt:  DLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEM

Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSNLATIKEKSKHQRKKDPKKLQPKRK--------KSKKFSQPQQL--------
         KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E+KIELD+DEV Q+N A I+  S   + KD   LQ +R         +S     P+++        
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSNLATIKEKSKHQRKKDPKKLQPKRK--------KSKKFSQPQQL--------

Query:  -------NEYGRDK-------------------------------------EENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMN
               N YG  K                                     EENQC T  +TR S  +RLS+ST KK R STS FDRLK+TNDQ +R+M 
Subjt:  -------NEYGRDK-------------------------------------EENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMN

Query:  NLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
        + + K F E N D K+HS +PSRMKRK  V INTEGSL +K  F
Subjt:  NLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-9643.67Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQY GP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD
        FEELATRAHDMELSIA+R  +D L+   R  G+N+           + ESM+V  T  KS SK K     R  DG      TL+ERQKK+Y FPD+D+ D
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD

Query:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------
        MLEQL++ QLI+L +CKRPE+  KVDDP YCKYH VI H VE+CFVLK+LILKLA E KIELD+DEV Q+N                             
Subjt:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------

Query:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------
                                                                  I  K K +R K   K +P + K + F QP++           
Subjt:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------

Query:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS
         L ++  +                                                           +E+NQC TST+ R SAF+RLS+STSKK R STS
Subjt:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS

Query:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         FDRLK+TNDQ +R+M +L+ K F E N D K+H+R+PSRMKRK SV INTEGSL +K  F
Subjt:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein1.1e-9644.55Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------
        MI N IRAQYGGP Q S +YSKPYTKRIDNLR P+GYQP KFQQFDGKGNPKQHI +FVETCENAG+RGD LV+QFVR+LK                   
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------

Query:  -------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IE
                                       EM           +L GIKPRTFEELATRAHDM+LSIA+R  +D L+   R +     +T       + 
Subjt:  -------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IE

Query:  ESMVVNTTLPKSSS-----KEKRQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLK
        ESM+V  T  KS S     K KR  DG      TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFVLK
Subjt:  ESMVVNTTLPKSSS-----KEKRQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLK

Query:  DLILKLAMERKIELDLDEVTQSN--------------------------------LATIKEK---SKHQRKKDPKKLQPKR-----KKSKKFSQPQQL--
        +LI KLA E KIELD+DEV Q+N                                L   ++K   S  Q K++P + + +       +S     P+++  
Subjt:  DLILKLAMERKIELDLDEVTQSN--------------------------------LATIKEK---SKHQRKKDPKKLQPKR-----KKSKKFSQPQQL--

Query:  -------------NEY-------------------------------------GRDKEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQ
                     N Y                                        KEENQC T T+ + SAF+RLS+S SKK R ST  FDRLK+TNDQ
Subjt:  -------------NEY-------------------------------------GRDKEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQ

Query:  PKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         +R+M  L+ K F E N D K+HSR+PSRMKRK SV INTEGSL +K  F
Subjt:  PKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

A0A5A7TGM1 Retrotransposon gag protein5.6e-10144.29Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQYGGP Q S +YSK YTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEKRQTDGAHH-------LTLKERQKKIYPFPDADIPDM
        FEELATRAHDMELSIA+R  +D L+   R +     +T       + ESM+V  T  KS SK K +    +H        TL+ERQKK+YPFPD+D+ DM
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEKRQTDGAHH-------LTLKERQKKIYPFPDADIPDM

Query:  LEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN------------------------------
        LEQL+E QLI+LPKCKRPE+  KVDDP YCKYHRVI H VE+CFVLK+LILKL  E KIELD+DEV Q+N                              
Subjt:  LEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN------------------------------

Query:  ------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ------------
                                                                 I  K K +R K   K +P + K + F QP+Q            
Subjt:  ------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ------------

Query:  LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSV
        L ++ ++                                                           +EENQC TST TR SAF+ LS+STSKK R STS 
Subjt:  LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSV

Query:  FDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
        FDRLK+ NDQ +R+M +L++K F E N D K+HSR+PSRMKRK SV INTEGSL +K  F
Subjt:  FDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

A0A5A7UI09 Retrotransposon gag protein8.4e-9743.67Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQY GP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD
        FEELATRAHDMELSIA+R  +D L+   R  G+N+           + ESM+V  T  KS SK K     R  DG      TL+ERQKK+Y FPD+D+ D
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD

Query:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------
        MLEQL++ QLI+L +CKRPE+  KVDDP YCKYH VI H VE+CFVLK+LILKLA E KIELD+DEV Q+N                             
Subjt:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------

Query:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------
                                                                  I  K K +R K   K +P + K + F QP++           
Subjt:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------

Query:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS
         L ++  +                                                           +E+NQC TST+ R SAF+RLS+STSKK R STS
Subjt:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS

Query:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         FDRLK+TNDQ +R+M +L+ K F E N D K+H+R+PSRMKRK SV INTEGSL +K  F
Subjt:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

A0A5A7URH1 Ty3-gypsy retrotransposon protein5.3e-9945.96Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------
        MI + I+ QYGGP Q   LY KPYTKRIDNLR P GYQPPKFQQFDGKGNPKQH+A+F++TCE AGTRGDLLVKQFVRTLK                   
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK-------------------

Query:  ---------------------------------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQ
                                                                 EM           +L GIKPRTFEELATRAHDMELSIA+R  +
Subjt:  ---------------------------------------------------------EM-----------LLTGIKPRTFEELATRAHDMELSIASRENQ

Query:  DLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEM
        D L+P  R +    ++T       I+ESMVV+ T  KS SK K     R+ DG      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+ 
Subjt:  DLLLPNMRKEGRNDEET-------IEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEM

Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSNLATIKEKSKHQRKKDPKKLQPKRK--------KSKKFSQPQQL--------
         KVDDP YCKYHRVI HPVE+CFVLK+LILKLA E+KIELD+DEV Q+N A I+  S   + KD   LQ +R         +S     P+++        
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSNLATIKEKSKHQRKKDPKKLQPKRK--------KSKKFSQPQQL--------

Query:  -------NEYGRDK-------------------------------------EENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMN
               N YG  K                                     EENQC T  +TR S  +RLS+ST KK R STS FDRLK+TNDQ +R+M 
Subjt:  -------NEYGRDK-------------------------------------EENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMN

Query:  NLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
        + + K F E N D K+HS +PSRMKRK  V INTEGSL +K  F
Subjt:  NLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

A0A5D3CCI8 Retrotransposon gag protein8.4e-9743.67Show/hide
Query:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT
        MI N IRAQY GP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQHIA+FVETCENAG+RGD LV+QFVR+LK        ++   GIKPRT
Subjt:  MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLK--------EMLLTGIKPRT

Query:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD
        FEELATRAHDMELSIA+R  +D L+   R  G+N+           + ESM+V  T  KS SK K     R  DG      TL+ERQKK+Y FPD+D+ D
Subjt:  FEELATRAHDMELSIASRENQDLLLPNMRKEGRND--------EETIEESMVVNTTLPKSSSKEK-----RQTDG--AHHLTLKERQKKIYPFPDADIPD

Query:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------
        MLEQL++ QLI+L +CKRPE+  KVDDP YCKYH VI H VE+CFVLK+LILKLA E KIELD+DEV Q+N                             
Subjt:  MLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAMERKIELDLDEVTQSN-----------------------------

Query:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------
                                                                  I  K K +R K   K +P + K + F QP++           
Subjt:  -------------------------------------------------------LATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQ-----------

Query:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS
         L ++  +                                                           +E+NQC TST+ R SAF+RLS+STSKK R STS
Subjt:  -LNEYGRD-----------------------------------------------------------KEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTS

Query:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF
         FDRLK+TNDQ +R+M +L+ K F E N D K+H+R+PSRMKRK SV INTEGSL +K  F
Subjt:  VFDRLKVTNDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTATTCAAGATTCCCTCTTGTACTCCAAACCTTATACTAAGAGGATTGATAATTTGAGAACGCCAATTGGGTA
TCAGCCACCGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCTACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTGCTAGTCA
AACAGTTCGTTCGAACACTTAAGGAAATGCTTTTGACTGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGTGCCCACGATATGGAGCTAAGTATTGCTAGTCGA
GAAAACCAAGACCTTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACGATGAAGAGACTATAGAAGAATCCATGGTTGTAAACACAACCCTTCCCAAGTCGTCTTCGAA
AGAAAAGCGACAAACTGATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGG
AAGCGCAACTGATAAAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGA
TGTTTCGTCCTAAAGGACTTAATTCTAAAGCTGGCTATGGAAAGAAAAATTGAGCTCGACCTTGATGAAGTAACTCAATCAAATCTTGCTACAATAAAAGAAAAGAGCAA
ACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAAAAGTAAAAAGTTCTCTCAACCTCAACAACTGAATGAGTATGGTCGCGACAAAGAAGAAAATC
AATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACA
AACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAATTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGAATCCCGTCACGTATGAAGAGGAAGTT
TTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAACAAAAAAAAAGGTTCTTCGCTGCAGTTCCTTCCTCCAAGTTCG
AAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGC
TGCAGTTCCTTCCTCCAAATTCGAAGGTTTTCATGCGCTTTGCTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAGTTCGA
AGGTTCTCACGTGCTTTGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCA
GTTCCTTCCTCCAAGTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCGCTCCTTCT
CCAAGTTCGAAGGTGCTTCTCTACACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCC
AAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAG
GTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCATATCACCCAATAAAATGGGGACTGGTCTA
GCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAA
GGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTATTCAAGATTCCCTCTTGTACTCCAAACCTTATACTAAGAGGATTGATAATTTGAGAACGCCAATTGGGTA
TCAGCCACCGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCTACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTGCTAGTCA
AACAGTTCGTTCGAACACTTAAGGAAATGCTTTTGACTGGTATAAAGCCTCGCACCTTTGAGGAACTAGCAACTCGTGCCCACGATATGGAGCTAAGTATTGCTAGTCGA
GAAAACCAAGACCTTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACGATGAAGAGACTATAGAAGAATCCATGGTTGTAAACACAACCCTTCCCAAGTCGTCTTCGAA
AGAAAAGCGACAAACTGATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTATTGG
AAGCGCAACTGATAAAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGA
TGTTTCGTCCTAAAGGACTTAATTCTAAAGCTGGCTATGGAAAGAAAAATTGAGCTCGACCTTGATGAAGTAACTCAATCAAATCTTGCTACAATAAAAGAAAAGAGCAA
ACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAAAAGTAAAAAGTTCTCTCAACCTCAACAACTGAATGAGTATGGTCGCGACAAAGAAGAAAATC
AATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACA
AACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAATTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGAATCCCGTCACGTATGAAGAGGAAGTT
TTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAACAAAAAAAAAGGTTCTTCGCTGCAGTTCCTTCCTCCAAGTTCG
AAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGC
TGCAGTTCCTTCCTCCAAATTCGAAGGTTTTCATGCGCTTTGCTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAGTTCGA
AGGTTCTCACGTGCTTTGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCA
GTTCCTTCCTCCAAGTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCGCTCCTTCT
CCAAGTTCGAAGGTGCTTCTCTACACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCC
AAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAG
GTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCATATCACCCAATAAAATGGGGACTGGTCTA
GCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAA
GGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAG
Protein sequenceShow/hide protein sequence
MITNCIRAQYGGPIQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQHIAYFVETCENAGTRGDLLVKQFVRTLKEMLLTGIKPRTFEELATRAHDMELSIASR
ENQDLLLPNMRKEGRNDEETIEESMVVNTTLPKSSSKEKRQTDGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVER
CFVLKDLILKLAMERKIELDLDEVTQSNLATIKEKSKHQRKKDPKKLQPKRKKSKKFSQPQQLNEYGRDKEENQCSTSTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVT
NDQPKRKMNNLELKFFDEVNSDKKLHSRIPSRMKRKFSVLINTEGSLKLKENFKFSLYKQKKRFFAAVPSSKFEGSHALRCSFFSLSSKVLTRFAAIPSSLSLKVLTLLR
CSSFLQIRRFSCALLKFLPPSLKVLTRFVAVPSPKFEGSHVLCCSSFLTVRRFSRASLQFLPPSSKVLTSLRCSSFLQVEGSHIASLRAALRCSSFLQVRRFSRASLAPS
PSSKVLLYTAPSPSSKALLSVATSPSSKALLSTAPSPSSKALLSTAPSPSSKVLLSTPLFEGSPLRFSFSKFEGGEVTAIESDDDRCRRVGSGDHPCRLLISPNKMGTGL
AGVHHCRQIWLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPAGYSDHPIKWGLV