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Lag0010836 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010836
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:7409136..7410089
RNA-Seq ExpressionLag0010836
SyntenyLag0010836
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.8e-3833.77Show/hide
Query:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC
        D+   +  ++ +  +  E+ L+ +++ K  T K I+ E FKS +  IW  ++ + ++  G N+F  +F+N   +  I++ GPW +D+ +L+L E  G   
Subjt:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC

Query:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR
          +L FRYV FW+  H LPLAC +R     +G L+G+V+++D  +  E      +RI+V IDV  PLKRG+ +  G       +++ YE+LP+FCY CG+
Subjt:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR

Query:  LGHIIKECDEDTG--TKEEELPYGPWLR
        +GH++++C  +T   T      +GPW+R
Subjt:  LGHIIKECDEDTG--TKEEELPYGPWLR

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]3.4e-3636.36Show/hide
Query:  KKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHKL
        K LA  ++ K+   + ++ E FKS + ++W     + I+  G N F+ KF     K  ++  GPW +DRA+L+L EPKG     + +F + +FW+    +
Subjt:  KKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHKL

Query:  PLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLK-SGRSGVEKMIVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKEE
        P+AC  +    E+G ++G VE+++ ++  E   + + RI+V I++T PLK+ +FLK  G S ++  +V  YE+LPDFCY CG +GH  KEC +  G ++E
Subjt:  PLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLK-SGRSGVEKMIVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKEE

Query:  ELPYGPWLR
        +LPYG W++
Subjt:  ELPYGPWLR

XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]8.9e-3737.14Show/hide
Query:  EKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHK
        EK +A  ++ K+   +K+S E  K  M ++W     + I+  G N+F+ KF +   K  I+  GPW +DRA+++L EP G     + +F  VS WV  H 
Subjt:  EKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHK

Query:  LPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKM-IVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKE
        +P+ C S+  A ++G+++GKVE+VD  D  E      LR+++ +D+++PLK+ + L+      E + + V YE+LPDFC+ CGR+GH  +EC       +
Subjt:  LPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKM-IVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKE

Query:  EELPYGPWLR
        +EL YGPWLR
Subjt:  EELPYGPWLR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.8e-3636.48Show/hide
Query:  KVTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI--IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEP
        K+T++E      +  +A++ T K L  +++CK+ +K+ IS  V K+ +   W  +     +D  GFN+FL  F  +  +  I+  GPW +DRA+++++ P
Subjt:  KVTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI--IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEP

Query:  KGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDF
               ++ FR VS WVHF  L LAC +++ A  +G+ +G  E  D+E  A   C  S LR++V+ DV +PL RG+ L          I + YE+LPDF
Subjt:  KGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDF

Query:  CYGCGRLGHIIKEC-DEDTGTKEEELPYGPWLR
         Y CGRL HI+K+C D    +  + L YGPWLR
Subjt:  CYGCGRLGHIIKEC-DEDTGTKEEELPYGPWLR

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]1.5e-3633.07Show/hide
Query:  EKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCG
        E+A  F       +   K +A  ++ KI   + ++ E  K+ + + W   H   ++  G N+F+ KF +   K  + + GPW +DRA+++L+EPKG    
Subjt:  EKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCG

Query:  DELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR
         + +F +VSFW+  H +PL C   S   E+GS +GKVE + ++  A+ +C    +RI+V +++T+PLK+ + LK      +  + V YE+LPDFC+ CG 
Subjt:  DELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR

Query:  LGHIIKECDEDTGTKEEELPYGPWLREPYKLKDMESVNTIGRMQNYMEEEAEVE
        +GH  +EC E  G ++E LP+GPWL+    L D   +N      +   E++  E
Subjt:  LGHIIKECDEDTGTKEEELPYGPWLREPYKLKDMESVNTIGRMQNYMEEEAEVE

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)3.7e-3637.14Show/hide
Query:  EKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHK
        EK LA  ++ K+   +++S E  K  M ++W     + I+  G N+F+ KF +   K  I+  GPW +DRA++ L EP G     +  F +VSFWV  H 
Subjt:  EKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHK

Query:  LPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKM-IVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKE
        +P+ C S+  AAE+G ++GKVE+V+ +   E      LR+++ +D+T+PLK+ + L+      + + + V YE+LPDFC+ CGR+GH  +EC       +
Subjt:  LPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKM-IVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKE

Query:  EELPYGPWLR
        +EL YGPWL+
Subjt:  EELPYGPWLR

A0A5C7GU64 CCHC-type domain-containing protein3.7e-3632.47Show/hide
Query:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC
        DE A+V  + E  I   ++ +   ++ K+ T KK++ E FK ++ +IWNQ   + ++  G N F+  F N   +  + + GPW + +++++LE+PKG   
Subjt:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC

Query:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCG
          +L F    FWV  H +P+ C ++     +   +G+V ++  E     +C    +R+KVQ+D+T+PLKR + +K G+     M+ + YE+LPDFC+ CG
Subjt:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCG

Query:  RLGHIIKEC-DED---TGTKEEELPYGPWLR
        R+GH ++EC DED        ++  +G W+R
Subjt:  RLGHIIKEC-DED---TGTKEEELPYGPWLR

A0A5C7H9Y2 CCHC-type domain-containing protein1.3e-3833.77Show/hide
Query:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC
        D+   +  ++ +  +  E+ L+ +++ K  T K I+ E FKS +  IW  ++ + ++  G N+F  +F+N   +  I++ GPW +D+ +L+L E  G   
Subjt:  DEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI-IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCC

Query:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR
          +L FRYV FW+  H LPLAC +R     +G L+G+V+++D  +  E      +RI+V IDV  PLKRG+ +  G       +++ YE+LP+FCY CG+
Subjt:  GDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGR

Query:  LGHIIKECDEDTG--TKEEELPYGPWLR
        +GH++++C  +T   T      +GPW+R
Subjt:  LGHIIKECDEDTG--TKEEELPYGPWLR

A0A5E4G034 PREDICTED: DUF4283 domain-containing1.1e-3533.21Show/hide
Query:  VTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQ-EHTIIDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKG
        +T DE+ ++  +++  ID   ++L  +++ K+ T    + E FK  M KIW+     ++   G NLFL  F     +  ++ SGPW +D+A++LLE P G
Subjt:  VTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQ-EHTIIDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKG

Query:  DCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCY
             ++  +Y  FW+  H +PL+C S +   +IG+  G+   +D+ +G + KC    LR++V +DV++PL+RG  + +  SG    +   YE+LP+FC+
Subjt:  DCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCY

Query:  GCGRLGHIIKECD--EDTGTKEEELPYGPWLREPYKLKDMESVNTIG-RMQNYMEEEAEVEG
         CGRLGH+ KEC   +    + +E PYG WL+     KD  S+     +  N    EAE +G
Subjt:  GCGRLGHIIKECD--EDTGTKEEELPYGPWLREPYKLKDMESVNTIG-RMQNYMEEEAEVEG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.8e-3636.48Show/hide
Query:  KVTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI--IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEP
        K+T++E      +  +A++ T K L  +++CK+ +K+ IS  V K+ +   W  +     +D  GFN+FL  F  +  +  I+  GPW +DRA+++++ P
Subjt:  KVTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTI--IDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEP

Query:  KGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDF
               ++ FR VS WVHF  L LAC +++ A  +G+ +G  E  D+E  A   C  S LR++V+ DV +PL RG+ L          I + YE+LPDF
Subjt:  KGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKC-DSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDF

Query:  CYGCGRLGHIIKEC-DEDTGTKEEELPYGPWLR
         Y CGRL HI+K+C D    +  + L YGPWLR
Subjt:  CYGCGRLGHIIKEC-DEDTGTKEEELPYGPWLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24070.1 Zinc knuckle (CCHC-type) family protein6.7e-0627.62Show/hide
Query:  WVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGR--SGVEKMIVVTYEKLP------DFCYGCGRLGH
        W+    +P+         EI S +G+V +V+L+DG         R+ V +D      R  F K  R  SG  K++   YE +        FC+ CG + H
Subjt:  WVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGR--SGVEKMIVVTYEKLP------DFCYGCGRLGH

Query:  IIKEC
        + + C
Subjt:  IIKEC

AT3G42140.1 zinc ion binding;nucleic acid binding9.6e-0520.45Show/hide
Query:  IVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSG
        I+  GPW ++  M +++  +      +  F+ + FW+    +PL   +      IG                                   + G+FL++ 
Subjt:  IVDSGPWFYDRAMLLLEEPKGDCCGDELAFRYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSG

Query:  RSGVEKMIVVTYEKLPDFCYGCGRLGHIIKEC
              ++   YEKL +FC  CG L H   EC
Subjt:  RSGVEKMIVVTYEKLPDFCYGCGRLGHIIKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGACGGCGGATGAAAAAGCAAGTGTGTTCCATCTTCAAGAAGCTGCAATTGATAGTACAGAGAAGAAACTGGCCAATGCAGTTTTATGCAAGATTTTTACAAA
GAAGAAAATCAGTCCTGAAGTATTCAAATCAATGATGCCAAAGATATGGAACCAAGAGCATACAATTATTGACTACCGAGGCTTCAACTTATTCCTTTGCAAATTCAAAA
ATGCAAGGATTAAAGGGCATATCGTAGACTCGGGGCCTTGGTTTTACGATAGAGCGATGCTTCTGTTGGAAGAGCCAAAAGGCGACTGCTGCGGAGATGAATTGGCGTTC
AGGTACGTCTCATTTTGGGTTCATTTTCATAAACTCCCTCTGGCTTGTTTTTCAAGGTCTGCAGCAGCGGAAATTGGAAGCTTATTGGGCAAAGTGGAGCAAGTGGATTT
GGAAGATGGTGCAGAAATAAAGTGTGATAGTTCATTACGTATCAAGGTCCAAATTGATGTGACTCGGCCGCTGAAACGTGGTGTTTTTCTTAAATCTGGAAGATCTGGGG
TGGAAAAAATGATCGTAGTGACGTATGAGAAATTACCTGATTTTTGCTATGGATGTGGGAGGTTGGGCCATATAATCAAGGAGTGTGATGAAGACACTGGTACAAAAGAG
GAGGAGCTACCGTATGGCCCTTGGCTTCGTGAACCATACAAATTAAAAGACATGGAGTCAGTTAATACTATAGGAAGGATGCAAAATTACATGGAGGAAGAGGCAGAGGT
CGAGGGCGGTTTGGGGATTGGGAGGATCATAGATCTTGGAGGAATAAAGAAGAGGGGGATAGCGAAGATGTGCTGCCAAAGAAAGGAGACGATGGTGGCATGGTTGACGG
CGGCAGAGCTGGCGGAGGCACGGCTGGCGGTGGAGATAAGGCAGCAATGGAGAAGGACCGAACGGCTCCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGACGGCGGATGAAAAAGCAAGTGTGTTCCATCTTCAAGAAGCTGCAATTGATAGTACAGAGAAGAAACTGGCCAATGCAGTTTTATGCAAGATTTTTACAAA
GAAGAAAATCAGTCCTGAAGTATTCAAATCAATGATGCCAAAGATATGGAACCAAGAGCATACAATTATTGACTACCGAGGCTTCAACTTATTCCTTTGCAAATTCAAAA
ATGCAAGGATTAAAGGGCATATCGTAGACTCGGGGCCTTGGTTTTACGATAGAGCGATGCTTCTGTTGGAAGAGCCAAAAGGCGACTGCTGCGGAGATGAATTGGCGTTC
AGGTACGTCTCATTTTGGGTTCATTTTCATAAACTCCCTCTGGCTTGTTTTTCAAGGTCTGCAGCAGCGGAAATTGGAAGCTTATTGGGCAAAGTGGAGCAAGTGGATTT
GGAAGATGGTGCAGAAATAAAGTGTGATAGTTCATTACGTATCAAGGTCCAAATTGATGTGACTCGGCCGCTGAAACGTGGTGTTTTTCTTAAATCTGGAAGATCTGGGG
TGGAAAAAATGATCGTAGTGACGTATGAGAAATTACCTGATTTTTGCTATGGATGTGGGAGGTTGGGCCATATAATCAAGGAGTGTGATGAAGACACTGGTACAAAAGAG
GAGGAGCTACCGTATGGCCCTTGGCTTCGTGAACCATACAAATTAAAAGACATGGAGTCAGTTAATACTATAGGAAGGATGCAAAATTACATGGAGGAAGAGGCAGAGGT
CGAGGGCGGTTTGGGGATTGGGAGGATCATAGATCTTGGAGGAATAAAGAAGAGGGGGATAGCGAAGATGTGCTGCCAAAGAAAGGAGACGATGGTGGCATGGTTGACGG
CGGCAGAGCTGGCGGAGGCACGGCTGGCGGTGGAGATAAGGCAGCAATGGAGAAGGACCGAACGGCTCCGGTAG
Protein sequenceShow/hide protein sequence
MKVTADEKASVFHLQEAAIDSTEKKLANAVLCKIFTKKKISPEVFKSMMPKIWNQEHTIIDYRGFNLFLCKFKNARIKGHIVDSGPWFYDRAMLLLEEPKGDCCGDELAF
RYVSFWVHFHKLPLACFSRSAAAEIGSLLGKVEQVDLEDGAEIKCDSSLRIKVQIDVTRPLKRGVFLKSGRSGVEKMIVVTYEKLPDFCYGCGRLGHIIKECDEDTGTKE
EELPYGPWLREPYKLKDMESVNTIGRMQNYMEEEAEVEGGLGIGRIIDLGGIKKRGIAKMCCQRKETMVAWLTAAELAEARLAVEIRQQWRRTERLR