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Lag0010839 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010839
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr1:7475520..7475963
RNA-Seq ExpressionLag0010839
SyntenyLag0010839
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049743.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]3.6e-1253.03Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL
        ML  FA+++ + +PGS++EYK+DADGRF YFFM LS  IS W+HCR +IS+D    NL+ +  G+L
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL

KAA0057223.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]5.5e-1356.06Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL
        ML  FA+++ + +PGS+I+YK+D DGRF YFFMALS  ISGW+HCRPIIS+D  + +L+ +  G+L
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL

KAA0065298.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.6e-1261.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FAH++ + +PGS++EYK+DA+ RF Y FM LST ISGW+HCRP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

KAA0066093.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]3.6e-1261.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FA+++ +++PGS++EYK+D D RF YFFMALST ISGW+H RP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

XP_008449188.1 PREDICTED: uncharacterized protein LOC103491139 [Cucumis melo]1.6e-1261.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FAH++ + +PGS++EYK+DA+ RF Y FM LST ISGW+HCRP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

TrEMBL top hitse value%identityAlignment
A0A1S3BM35 uncharacterized protein LOC1034911397.8e-1361.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FAH++ + +PGS++EYK+DA+ RF Y FM LST ISGW+HCRP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

A0A5A7U1K5 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.7e-1253.03Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL
        ML  FA+++ + +PGS++EYK+DADGRF YFFM LS  IS W+HCR +IS+D    NL+ +  G+L
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL

A0A5A7VCD5 Protein FAR1-RELATED SEQUENCE 3-like7.8e-1361.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FAH++ + +PGS++EYK+DA+ RF Y FM LST ISGW+HCRP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

A0A5A7VD35 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.7e-1261.54Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD
        ML  FA+++ +++PGS++EYK+D D RF YFFMALST ISGW+H RP+IS+D
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVD

A0A5D3D5B0 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.7e-1356.06Show/hide
Query:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL
        ML  FA+++ + +PGS+I+YK+D DGRF YFFMALS  ISGW+HCRPIIS+D  + +L+ +  G+L
Subjt:  MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTTCGTTTGCCCATATGGTGAATATTAAAAGTCCAGGTTCAATAATTGAATATAAGATTGATGCCGATGGAAGATTTCGATACTTTTTCATGGCGTTATCAAC
ATGCATTTCTGGTTGGAAGCATTGTCGTCCAATTATTTCTGTAGATGCATTTCAGAAGAATCTTCGTATGAGACTATTTGGGTCCCTAAAAGATTTCCAACAGATTGTTG
TTCAGTGTTCCCTTGCTCTTCTGTTGTTATCAGTTGTGTTTGCTCAATCTCATCTTCAAATTCGTGTCCTACATTCCGCTCCTCAGATTTTTGGCTTTGATCACCAGACA
TATTCCCAGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTTCGTTTGCCCATATGGTGAATATTAAAAGTCCAGGTTCAATAATTGAATATAAGATTGATGCCGATGGAAGATTTCGATACTTTTTCATGGCGTTATCAAC
ATGCATTTCTGGTTGGAAGCATTGTCGTCCAATTATTTCTGTAGATGCATTTCAGAAGAATCTTCGTATGAGACTATTTGGGTCCCTAAAAGATTTCCAACAGATTGTTG
TTCAGTGTTCCCTTGCTCTTCTGTTGTTATCAGTTGTGTTTGCTCAATCTCATCTTCAAATTCGTGTCCTACATTCCGCTCCTCAGATTTTTGGCTTTGATCACCAGACA
TATTCCCAGTTATAG
Protein sequenceShow/hide protein sequence
MLGSFAHMVNIKSPGSIIEYKIDADGRFRYFFMALSTCISGWKHCRPIISVDAFQKNLRMRLFGSLKDFQQIVVQCSLALLLLSVVFAQSHLQIRVLHSAPQIFGFDHQT
YSQL