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Lag0010845 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010845
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr1:7834045..7842512
RNA-Seq ExpressionLag0010845
SyntenyLag0010845
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53482.1 hypothetical protein EZV62_022651 [Acer yangbiense]1.8e-0730.12Show/hide
Query:  DFEKACITFWAMWNDRNSK------LRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG-YKLYTDATINPIFNGAGYDMIIMEPNG
        + E  C+  W +W  RN        +RNE +  W    D+I  + +    +         + R+     ++G +K+ TDA I    N  G   II +  G
Subjt:  DFEKACITFWAMWNDRNSK------LRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG-YKLYTDATINPIFNGAGYDMIIMEPNG

Query:  K-MLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM
        K M+AA++ MDA CY P  A+  AIL G+R+        A + SD+ + VN+I   S I ++I V+
Subjt:  K-MLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM

XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]6.1e-0832Show/hide
Query:  SEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG--YKLYTDATINPIFNGAGYDMIIMEPNGKM
        S ++     IT WA+WNDR++ +  +KI       +WI  Y  E+R K ++     + PRV      +G   K+ TDA ++    G+G  +++ E N ++
Subjt:  SEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG--YKLYTDATINPIFNGAGYDMIIMEPNGKM

Query:  LAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI
        + AM        TPL A+I AI  G+ L  R+      V +DSL A+N+I
Subjt:  LAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI

XP_030483444.1 uncharacterized protein LOC115700033 [Cannabis sativa]3.8e-1030.6Show/hide
Query:  PFLHQDTNRILCLASQSSE-ADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEI---RPKSNSDYTENVLPRVGHESSE-MGYKLYTDATI
        P  H     +L  AS+  E  DFEK  I+   +W +RN K     I T  Q+  WIS Y+ EI   R K+    +        +  +E + YKLY DA I
Subjt:  PFLHQDTNRILCLASQSSE-ADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEI---RPKSNSDYTENVLPRVGHESSE-MGYKLYTDATI

Query:  NPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM
        +   N  G+  II   + +M AA+       ++   A+  A+L G+   Q +      VFSDSL+ V+ + G ++  +E+ V+
Subjt:  NPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM

XP_030487691.1 uncharacterized protein LOC115704629 [Cannabis sativa]1.5e-0932.08Show/hide
Query:  ILCLASQSSE-ADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEI---RPKSNSDYTENVLPRVGHESSEM-GYKLYTDATINPIFNGAGY
        +L  AS+  E  DFEK  I+ W +W +RN K     I T  Q+  WIS Y+ EI   R K+    +        +  +E+  YKLY DA I+   N  G+
Subjt:  ILCLASQSSE-ADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEI---RPKSNSDYTENVLPRVGHESSEM-GYKLYTDATINPIFNGAGY

Query:  DMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVN
          +I   + +M AA+       ++   A+  A+L G+R  Q +      VF DSL+  N
Subjt:  DMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVN

XP_030505068.1 uncharacterized protein LOC115720043 [Cannabis sativa]6.8e-0726.7Show/hide
Query:  HQDTNR-ILCLASQSSEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIR-----PKSNSDYTENVLPRVGHESSEMG-----YKLYTD
        H   N  IL LA+  S +  E+     W++WN+RN ++   K    D L  +   Y  E       P  NS    N    V  +S  M       KL TD
Subjt:  HQDTNR-ILCLASQSSEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIR-----PKSNSDYTENVLPRVGHESSEMG-----YKLYTD

Query:  ATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVMAFHQV
        A ++ + + +G+  I+   NG ++A M      C+ P   ++ A++H ++ LQ +      + +DS   VN      L  S+  V  FH +
Subjt:  ATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVMAFHQV

TrEMBL top hitse value%identityAlignment
A0A2P5EN41 Ribonuclease H-like domain containing protein1.2e-0631.74Show/hide
Query:  ILCLASQSSEADFEKACITFWAMWNDRNSKLRN----EKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEM-------GYKLYTDATINPI
        +L L S   +   +  C+ FWA+WN RN+ L N    E   T+D  C  +    LE R  SN       LP +   SS         G K  TDAT    
Subjt:  ILCLASQSSEADFEKACITFWAMWNDRNSKLRN----EKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEM-------GYKLYTDATINPI

Query:  FNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI
         +  GY  +I +  G +L    +    C+     ++ AI  G+RL     C  A   SDSL AVN I
Subjt:  FNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI

A0A5C7HA98 CCHC-type domain-containing protein8.6e-0830.12Show/hide
Query:  DFEKACITFWAMWNDRNSK------LRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG-YKLYTDATINPIFNGAGYDMIIMEPNG
        + E  C+  W +W  RN        +RNE +  W    D+I  + +    +         + R+     ++G +K+ TDA I    N  G   II +  G
Subjt:  DFEKACITFWAMWNDRNSK------LRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG-YKLYTDATINPIFNGAGYDMIIMEPNG

Query:  K-MLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM
        K M+AA++ MDA CY P  A+  AIL G+R+        A + SD+ + VN+I   S I ++I V+
Subjt:  K-MLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVM

A0A6J1DZK3 uncharacterized protein LOC1110249683.0e-0832Show/hide
Query:  SEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG--YKLYTDATINPIFNGAGYDMIIMEPNGKM
        S ++     IT WA+WNDR++ +  +KI       +WI  Y  E+R K ++     + PRV      +G   K+ TDA ++    G+G  +++ E N ++
Subjt:  SEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMG--YKLYTDATINPIFNGAGYDMIIMEPNGKM

Query:  LAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI
        + AM        TPL A+I AI  G+ L  R+      V +DSL A+N+I
Subjt:  LAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMI

A0A803Q027 Uncharacterized protein3.3e-0726.7Show/hide
Query:  HQDTNR-ILCLASQSSEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIR-----PKSNSDYTENVLPRVGHESSEMG-----YKLYTD
        H   N  IL LA+  S +  E+     W++WN+RN ++   K    D L  +   Y  E       P  NS    N    V  +S  M       KL TD
Subjt:  HQDTNR-ILCLASQSSEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIR-----PKSNSDYTENVLPRVGHESSEMG-----YKLYTD

Query:  ATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVMAFHQV
        A ++ + + +G+  I+   NG ++A M      C+ P   ++ A++H ++ LQ +      + +DS   VN      L  S+  V  FH +
Subjt:  ATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVMAFHQV

A0A803QHW9 Uncharacterized protein2.5e-0725.27Show/hide
Query:  DTNRILCLASQSSEADFEKACITFWAMWNDRNSKLR----NEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEM-------------GYK
        D + I  L++  S+ DFE    T WA+W+ RN  L      E  +T     D++  Y    R    +    +V P   H S +              G K
Subjt:  DTNRILCLASQSSEADFEKACITFWAMWNDRNSKLR----NEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEM-------------GYK

Query:  LYTDATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSL
        L  DA +N      G   I+ + NG ++AA+      C+     + +A+ H +    + Q +  H+ +DSL   N +I  S+
Subjt:  LYTDATINPIFNGAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACTGGTCTAGCAGGAGTGCATCACTGCTACTCAGATCACCCAATAAAATGGGGACTGGTCAAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACGACCCCTG
CAGGCTACTAAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGCAAATCTGGTGACGACCCCTATAGGCTACTCAGATCACCCAATAAAATGGGGA
CTGGTCTAGCAGGAGTGCATCACTGTAGACAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACCACCCCTGTAGGTTACTCAGATCATCCAATAAAATGGAGACTG
GAGTGCGTCACTGTGGACGAATCTGGTGGCCACCCCTGCAGGTTACTCAGATCATCCAATAAAATGGAGACTGGTCTAGCAGGAGTGCATCACTGTGGACGAATCTGGCT
ACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAGTAAAATCACTGCAAGTGAATTTGGTGACGACTATTGCACGATGCTTACACATTCAAACAGAGTTAGAGA
AGCCAGAGTCCAGAGCATTCTCCCAAGGTCCAGAGTCTTCAGAAGTCAGAGAGTCCAGAGAATTCAGAAGATCCAAGATTCAGAATTCGACCATCTCAAGACTCAGAAGA
TCCAACGACTGGAAGATTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAACAGGATATTATGTTTGGCTTCACAGTCATCTGAGGCCGACTTTGAGAAGGCTTGCAT
AACGTTTTGGGCCATGTGGAATGACCGCAATAGTAAATTAAGAAATGAAAAGATTATGACCTGGGATCAGCTGTGCGATTGGATTAGTGGATATTGGTTGGAAATAAGAC
CAAAATCTAATAGTGACTATACGGAAAATGTGCTTCCAAGGGTTGGACATGAGAGCTCAGAGATGGGGTACAAATTATATACTGATGCAACGATCAATCCAATATTCAAT
GGCGCGGGGTATGATATGATTATTATGGAGCCTAATGGGAAAATGTTAGCAGCTATGGAGATGATGGATGCCACTTGCTACACTCCGTTAGCAGCACAGATTCAAGCAAT
CCTTCATGGGATTAGATTATTGCAAAGAATGCAATGTGAGACAGCACATGTTTTCTCGGATTCTTTAAATGCGGTGAATATGATTATAGGAGACTCACTGATCTCATCTG
AGATATCAGTTATGGCATTTCATCAGGTATTTGCATTCAGTCCTCGTGCAGAAGGAGAATCGATGGAGGATGTGGGGCAAACAAGAGTCTCGACGGCACGGCGGAAGAAG
GTCGCGGCACGACGGTTGTGGGTCATCGGCGCGATGCGAGAGGTAGGGATTGGGATACACTCGGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAA
GGGGGGAAATGGTGGGAAGGGAGGGTTGTGGAAGATGAAGATGGACGGACGGGCTGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGACTGGTCTAGCAGGAGTGCATCACTGCTACTCAGATCACCCAATAAAATGGGGACTGGTCAAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACGACCCCTG
CAGGCTACTAAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGCAAATCTGGTGACGACCCCTATAGGCTACTCAGATCACCCAATAAAATGGGGA
CTGGTCTAGCAGGAGTGCATCACTGTAGACAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACCACCCCTGTAGGTTACTCAGATCATCCAATAAAATGGAGACTG
GAGTGCGTCACTGTGGACGAATCTGGTGGCCACCCCTGCAGGTTACTCAGATCATCCAATAAAATGGAGACTGGTCTAGCAGGAGTGCATCACTGTGGACGAATCTGGCT
ACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAGTAAAATCACTGCAAGTGAATTTGGTGACGACTATTGCACGATGCTTACACATTCAAACAGAGTTAGAGA
AGCCAGAGTCCAGAGCATTCTCCCAAGGTCCAGAGTCTTCAGAAGTCAGAGAGTCCAGAGAATTCAGAAGATCCAAGATTCAGAATTCGACCATCTCAAGACTCAGAAGA
TCCAACGACTGGAAGATTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAACAGGATATTATGTTTGGCTTCACAGTCATCTGAGGCCGACTTTGAGAAGGCTTGCAT
AACGTTTTGGGCCATGTGGAATGACCGCAATAGTAAATTAAGAAATGAAAAGATTATGACCTGGGATCAGCTGTGCGATTGGATTAGTGGATATTGGTTGGAAATAAGAC
CAAAATCTAATAGTGACTATACGGAAAATGTGCTTCCAAGGGTTGGACATGAGAGCTCAGAGATGGGGTACAAATTATATACTGATGCAACGATCAATCCAATATTCAAT
GGCGCGGGGTATGATATGATTATTATGGAGCCTAATGGGAAAATGTTAGCAGCTATGGAGATGATGGATGCCACTTGCTACACTCCGTTAGCAGCACAGATTCAAGCAAT
CCTTCATGGGATTAGATTATTGCAAAGAATGCAATGTGAGACAGCACATGTTTTCTCGGATTCTTTAAATGCGGTGAATATGATTATAGGAGACTCACTGATCTCATCTG
AGATATCAGTTATGGCATTTCATCAGGTATTTGCATTCAGTCCTCGTGCAGAAGGAGAATCGATGGAGGATGTGGGGCAAACAAGAGTCTCGACGGCACGGCGGAAGAAG
GTCGCGGCACGACGGTTGTGGGTCATCGGCGCGATGCGAGAGGTAGGGATTGGGATACACTCGGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAA
GGGGGGAAATGGTGGGAAGGGAGGGTTGTGGAAGATGAAGATGGACGGACGGGCTGGTGCATGA
Protein sequenceShow/hide protein sequence
MGTGLAGVHHCYSDHPIKWGLVKQECITVGKSGDDPCRLLRSPNKMGTGLAGVHHCKSGDDPYRLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPVGYSDHPIKWRL
ECVTVDESGGHPCRLLRSSNKMETGLAGVHHCGRIWLLRSPNKMGTGLVGVKSLQVNLVTTIARCLHIQTELEKPESRAFSQGPESSEVRESREFRRSKIQNSTISRLRR
SNDWKIPKNQPFLHQDTNRILCLASQSSEADFEKACITFWAMWNDRNSKLRNEKIMTWDQLCDWISGYWLEIRPKSNSDYTENVLPRVGHESSEMGYKLYTDATINPIFN
GAGYDMIIMEPNGKMLAAMEMMDATCYTPLAAQIQAILHGIRLLQRMQCETAHVFSDSLNAVNMIIGDSLISSEISVMAFHQVFAFSPRAEGESMEDVGQTRVSTARRKK
VAARRLWVIGAMREVGIGIHSVLGVENGGKWRIKSFKGGNGGKGGLWKMKMDGRAGA