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Lag0010847 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010847
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:7887240..7889868
RNA-Seq ExpressionLag0010847
SyntenyLag0010847
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015387877.1 uncharacterized protein LOC107177871 [Citrus sinensis]1.8e-2139.39Show/hide
Query:  DELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFDK
        +EL    + ++L  EE D++   GS           C+VGK+L +RKVN E  +  M+N WR  +D +V+ +G+N F+ KF +  EK RVL  GPW FD+
Subjt:  DELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFDK

Query:  SLIVLVTPTAADDPRQMAFTVASFWIQIQNVP
        +L+VL  P    D +   FT +SFW+Q+ N+P
Subjt:  SLIVLVTPTAADDPRQMAFTVASFWIQIQNVP

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.4e-3247.1Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+    T +E + + +   +P+L+AD++ LC+V K+ +S++++AEA R+VMK+VWRVH  TR + LG NI+V+ FK++ EK+RVL +GPW F+
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL+VL +PTA + P  M F   +FWIQI N+PF  ++
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.5e-2842.96Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+  +LT E+ + I +   +PL++ +++    VGK+ +S++++ EAFR+VMK++W+VH  T ++  G N++V+ FK++ EK RVL +GPW+F+
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFR
         SL+VL +PTA D PR M F   + WIQI  +PF+
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFR

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]3.0e-2944.2Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MD++T  W+  +L  EE D I +   +P+L+ D+I LC VGK+  S+++  EAF +VMK VW++H  TR++  G NI+V+ FKT+ EK RV   GPW FD
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL++LV  TAA+ P  +  ++ +FW+QI  + F  +T
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.5e-3348.55Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+  +LT EE +   +   +P+L+A++I LC VGK+ +S++++A+A  +VMK VW++H  TR++  G NI+V+ FKT++EK RVL +GPW FD
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL VLV+PTAAD P  + F   +FW+QI  +PF +LT
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

TrEMBL top hitse value%identityAlignment
A0A314Z5A5 DUF4283 domain-containing protein6.1e-2039.57Show/hide
Query:  MDELTASW-KGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAF
        M+E+  S+ K L LT EETDV+ +  ++     + +   +VGK+L++   N EAF+  M  +W   R+ R   LG+N+F+  F T L++ RVLR GPW F
Subjt:  MDELTASW-KGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAF

Query:  DKSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        DK+L++L  P     P +M    A FW+QI NVP   +T
Subjt:  DKSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

A0A6J1D765 uncharacterized protein LOC1110179023.1e-3247.1Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+    T +E + + +   +P+L+AD++ LC+V K+ +S++++AEA R+VMK+VWRVH  TR + LG NI+V+ FK++ EK+RVL +GPW F+
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL+VL +PTA + P  M F   +FWIQI N+PF  ++
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

A0A6J1DP89 uncharacterized protein LOC1110229327.2e-2942.96Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+  +LT E+ + I +   +PL++ +++    VGK+ +S++++ EAFR+VMK++W+VH  T ++  G N++V+ FK++ EK RVL +GPW+F+
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFR
         SL+VL +PTA D PR M F   + WIQI  +PF+
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFR

A0A6J1DVS4 uncharacterized protein LOC1110235551.4e-2944.2Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MD++T  W+  +L  EE D I +   +P+L+ D+I LC VGK+  S+++  EAF +VMK VW++H  TR++  G NI+V+ FKT+ EK RV   GPW FD
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL++LV  TAA+ P  +  ++ +FW+QI  + F  +T
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

A0A6J1DYG3 uncharacterized protein LOC1110246762.2e-3348.55Show/hide
Query:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD
        MDE+T  W+  +LT EE +   +   +P+L+A++I LC VGK+ +S++++A+A  +VMK VW++H  TR++  G NI+V+ FKT++EK RVL +GPW FD
Subjt:  MDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFD

Query:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT
        KSL VLV+PTAAD P  + F   +FW+QI  +PF +LT
Subjt:  KSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein6.1e-0427.27Show/hide
Query:  MVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFDKSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFL
        + G+ +  R+ N  +    M  +W          +    F   F        VLR GPWAF+  +I+L       +P+   F    FW+QI+ +PF+FL
Subjt:  MVGKILSSRKVNAEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFDKSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGATCTCTCAAGAGCTTGTACTTTCAAGCATTTCCTTCCCATTCACTATCTCTATAAGACTCCCACAAGTCGTTCTTGGCCCGGAGAATAGTAGGGAAGACAC
TAGAGGTTGTCCAAGGAGGATAGGAGAAGAAAACAACAAAAGGAGTTCCTCTCAAGTGAGCTACAAAAAGAAGAAAGCTTTCTCTGGAGGAACTTTAGTCTTGTCTAACA
TGGATGGAAATGAGCTGCCAAGTCCAGTTAATTCAGATCAGGAGCAAAGTCGTTCTGGATACATTTTTGGTCATCAAACAAAGAGCAAGTTGTTTAGCGAGTTCATGATC
CATTTAAGGTCTATTACCAAGGTCGAGGTCGAAGCCTGTGTCAATCCAGGTTCGTTTTCAGCTTTTATCTCGATTAAATCGCACCCGGCTATTCAGTCGAGGTCGAAGCC
TGTGTCAATCCAGTTTCTTGGCTTGGTTTGGGTTTGTCTGTTGTGTTTCGTGCGCCTTACATCGTTCGTCATGGATGAACTTACAGCTAGTTGGAAGGGTCTTTCTCTTA
CGGCCGAGGAGACCGATGTGATCGACTTGTTTGGCTCGGAGCCATTGTTATCTGCGGATTCCATTAATCTTTGTATGGTTGGGAAGATTCTGTCCAGCCGGAAAGTGAAT
GCTGAAGCGTTTCGTAATGTTATGAAGAATGTGTGGCGAGTCCATCGTGACACTCGGGTTGATTTCCTTGGTGATAACATTTTTGTTGTCAAGTTCAAGACTGTATTGGA
AAAGACTCGTGTTCTTCGAGCGGGTCCGTGGGCTTTTGATAAGAGTTTGATTGTTCTAGTGACACCAACTGCAGCGGATGATCCGAGGCAAATGGCTTTTACGGTAGCAT
CTTTTTGGATCCAGATTCAGAACGTCCCTTTTCGTTTTCTAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGATCTCTCAAGAGCTTGTACTTTCAAGCATTTCCTTCCCATTCACTATCTCTATAAGACTCCCACAAGTCGTTCTTGGCCCGGAGAATAGTAGGGAAGACAC
TAGAGGTTGTCCAAGGAGGATAGGAGAAGAAAACAACAAAAGGAGTTCCTCTCAAGTGAGCTACAAAAAGAAGAAAGCTTTCTCTGGAGGAACTTTAGTCTTGTCTAACA
TGGATGGAAATGAGCTGCCAAGTCCAGTTAATTCAGATCAGGAGCAAAGTCGTTCTGGATACATTTTTGGTCATCAAACAAAGAGCAAGTTGTTTAGCGAGTTCATGATC
CATTTAAGGTCTATTACCAAGGTCGAGGTCGAAGCCTGTGTCAATCCAGGTTCGTTTTCAGCTTTTATCTCGATTAAATCGCACCCGGCTATTCAGTCGAGGTCGAAGCC
TGTGTCAATCCAGTTTCTTGGCTTGGTTTGGGTTTGTCTGTTGTGTTTCGTGCGCCTTACATCGTTCGTCATGGATGAACTTACAGCTAGTTGGAAGGGTCTTTCTCTTA
CGGCCGAGGAGACCGATGTGATCGACTTGTTTGGCTCGGAGCCATTGTTATCTGCGGATTCCATTAATCTTTGTATGGTTGGGAAGATTCTGTCCAGCCGGAAAGTGAAT
GCTGAAGCGTTTCGTAATGTTATGAAGAATGTGTGGCGAGTCCATCGTGACACTCGGGTTGATTTCCTTGGTGATAACATTTTTGTTGTCAAGTTCAAGACTGTATTGGA
AAAGACTCGTGTTCTTCGAGCGGGTCCGTGGGCTTTTGATAAGAGTTTGATTGTTCTAGTGACACCAACTGCAGCGGATGATCCGAGGCAAATGGCTTTTACGGTAGCAT
CTTTTTGGATCCAGATTCAGAACGTCCCTTTTCGTTTTCTAACGTGA
Protein sequenceShow/hide protein sequence
MEEISQELVLSSISFPFTISIRLPQVVLGPENSREDTRGCPRRIGEENNKRSSSQVSYKKKKAFSGGTLVLSNMDGNELPSPVNSDQEQSRSGYIFGHQTKSKLFSEFMI
HLRSITKVEVEACVNPGSFSAFISIKSHPAIQSRSKPVSIQFLGLVWVCLLCFVRLTSFVMDELTASWKGLSLTAEETDVIDLFGSEPLLSADSINLCMVGKILSSRKVN
AEAFRNVMKNVWRVHRDTRVDFLGDNIFVVKFKTVLEKTRVLRAGPWAFDKSLIVLVTPTAADDPRQMAFTVASFWIQIQNVPFRFLT