; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010848 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010848
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:7892797..7893724
RNA-Seq ExpressionLag0010848
SyntenyLag0010848
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023889179.1 uncharacterized protein LOC112001232 isoform X1 [Quercus suber]6.5e-1426.43Show/hide
Query:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVLQVF--------------MVSLT
        ++ + P++VFLSETK+    MEIV+ RLGFS+  +V S G  GGLALLWS +    + S+S +HID  ++ + + G L  F                 L 
Subjt:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVLQVF--------------MVSLT

Query:  MILTSDHGVSSVNCG-----------APLIPR--GWWGAISMLFYITQRSQGGGPHQKVSW----------------MLFASVWMIALYLIWVFH-----
         +L S   +S   CG           A  +PR      +   +  +      G      +W                 L  S W+     + V H     
Subjt:  MILTSDHGVSSVNCG-----------APLIPR--GWWGAISMLFYITQRSQGGGPHQKVSW----------------MLFASVWMIALYLIWVFH-----

Query:  --------GSLSFTTPNGHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRI
                 S  F   N  R   FE +W++  +C EV+  AW+ G   + P G+A     C  +L  W ++  GN   +I
Subjt:  --------GSLSFTTPNGHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRI

XP_030963753.1 uncharacterized protein LOC115984908 [Quercus lobata]1.7e-1428.11Show/hide
Query:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVL--QVFMVSLTMILTSDHGVSSV
        ++ + P++VFLSETKL    ME V+Y+LGFS+  +V S GR  GL+LLWS++    + SYS  HID  +      G L  Q  M     ++         
Subjt:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVL--QVFMVSLTMILTSDHGVSSV

Query:  NCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWM-LFASVWMIALYLIWVFHGSLSFTTPN-----GHRISRFEEVWLQSPECPEVVSSAWHVGNVC
         CG            S +     R+          W+  F    +  L      H  L  T P+      +R   FE +W +  +C EV+ +AW+ G + 
Subjt:  NCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWM-LFASVWMIALYLIWVFHGSLSFTTPN-----GHRISRFEEVWLQSPECPEVVSSAWHVGNVC

Query:  SDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRV-QLAIQNLGS
          P G+A     C  +L+ W ++  GN   +I    + +  L+I + G+
Subjt:  SDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRV-QLAIQNLGS

XP_042939411.1 uncharacterized protein LOC122274439 [Carya illinoinensis]8.5e-1424.83Show/hide
Query:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDG-------TTGVL--------------------
        P  +FL ET+LH   ME ++++LGF  C  VS  GRSGG+AL W +     + SYS  H+   +  +G        TGV                     
Subjt:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDG-------TTGVL--------------------

Query:  -----QVFMVSLTMILTSD-------HGVSSVNCGAPLIPRGW---WGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALY-LIWVFHGSLSFT----
              + M     I+++D          S +     +I        G     F    R +GG         LF++    +LY +  V HG ++++    
Subjt:  -----QVFMVSLTMILTSD-------HGVSSVNCGAPLIPRGW---WGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALY-LIWVFHGSLSFT----

Query:  ----------TPNGHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQLAIQNLGSAPNREELC
                     G R+ RFE +W+++P+C ++V  AW   N   D   + +K   C   L  W ++  G+    + VA +++QLA Q    + ++++L 
Subjt:  ----------TPNGHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQLAIQNLGSAPNREELC

Query:  EA
        EA
Subjt:  EA

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]6.9e-1627.31Show/hide
Query:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHI-------DGWMDW--DGTTGVLQV----FMVSLTMILTSD
        P V+FL ETKL   +ME +R R+GF  CFVV+S GR GG+ALLW +E+  S+ S+S  HI       DG M+W   G  G L++       SL   L  +
Subjt:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHI-------DGWMDW--DGTTGVLQV----FMVSLTMILTSD

Query:  HGVSSVNCG-------------------------------APLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLS-----
          +  + CG                                 LI  G+ G      +  +R + G   +++   +    W     L  V HG  +     
Subjt:  HGVSSVNCG-------------------------------APLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLS-----

Query:  --FTTPNG------HRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGN
             P+       H++ R E +W++  EC +V+S  W   +       +  + +IC + L AW R K G+
Subjt:  --FTTPNG------HRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGN

XP_042983151.1 uncharacterized protein LOC122312574 [Carya illinoinensis]9.1e-1626.82Show/hide
Query:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVLQVFMVSLTMILTSDHGVSSVNCGAPLI
        P ++FL ET+L   E E+ ++RLGFS+C  V   GR GG+ LLW  +V  S+L+YS  HID  +D     GV           LT  +G   V     L 
Subjt:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVLQVFMVSLTMILTSDHGVSSVNCGAPLI

Query:  PRGW-------------WGAISMLFYITQRSQ--GGGPH---QKVSWMLFASVWMIALYLIWVFHGSLSFTT--------------PNGHRISRFEEVWL
         + W             W  +     +    +  GGG H   +++   L    W        V HG ++++                   +  RFE +W+
Subjt:  PRGW-------------WGAISMLFYITQRSQ--GGGPH---QKVSWMLFASVWMIALYLIWVFHGSLSFTT--------------PNGHRISRFEEVWL

Query:  QSPECPEVVSSAWHVGNVCSDPS---GLARKTNICMRSLNAWGRSKTGNFGSRISVASQRV
            C +++SS W  G+V S      GL +++ +   +LN W  +  GN   ++S+A Q++
Subjt:  QSPECPEVVSSAWHVGNVCSDPS---GLARKTNICMRSLNAWGRSKTGNFGSRISVASQRV

TrEMBL top hitse value%identityAlignment
A0A2N9FDP4 Reverse transcriptase domain-containing protein8.3e-1529.92Show/hide
Query:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMD------WDGT-------TGVLQVFMV------SLT
        P+V+FL ETKL    ME++R +LGF + F V S GRSGGLALLW  E    + ++S +HID  +D      W  T         +L+V         SL 
Subjt:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMD------WDGT-------TGVLQVFMV------SLT

Query:  MILTSDHGVSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLS---------------FTTPNGHRISRFEEV
         IL     V++ N    L+  G+ GA     +   R        ++   L  + W+       V H S+S               FT+     + RFEE 
Subjt:  MILTSDHGVSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLS---------------FTTPNGHRISRFEEV

Query:  WLQSPECPEVVSSAW-HVGNVCSDPSGLARKTNICMRSLNAWGR
        W  +P+C +++  +W    NV S    L +K + C  +L  W R
Subjt:  WLQSPECPEVVSSAW-HVGNVCSDPSGLARKTNICMRSLNAWGR

A0A2N9FYH3 CCHC-type domain-containing protein1.2e-1324.74Show/hide
Query:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMD------------------------WD------GTT
        PQ+VFL ET+L   ++E +R +LG   CF V      GGLALLW   V   + SYS +HID W+D                        W+      G +
Subjt:  PQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMD------------------------WD------GTT

Query:  GVLQVFMVSLTMILTSDHGVSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWM------IALYLIWVFHGSLSF------TTPNGH
          + + M     I +SD              +G+ G      +   R+QG    +++   +  + WM         + ++ F   L            GH
Subjt:  GVLQVFMVSLTMILTSDHGVSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWM------IALYLIWVFHGSLSF------TTPNGH

Query:  ----RISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQLAIQNLGSAPNREE
            R   FE  WL+   C EV++ AW V +V +    L +K   C  +L +W +S+       I+    R++      G+  N++E
Subjt:  ----RISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQLAIQNLGSAPNREE

A0A803NSB0 Uncharacterized protein2.6e-1629.69Show/hide
Query:  KPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGT-----TGVLQVFMVSLTMILTSDHGVSSVN
        +P  VFL ETK ++A +E V   LG+   F+V + GRSGGLALLW +E    ++ +S NHID  ++ +G+     TGV         M   +       N
Subjt:  KPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGT-----TGVLQVFMVSLTMILTSDHGVSSVN

Query:  CGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWML-----------FASVWMIALYLIW-------------VFHGS---LSFTTPNG---HRISRFE
           P      W  IS L  +  +S   G     SW++              + +I     W             + H S   L F  P+    +R  RFE
Subjt:  CGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWML-----------FASVWMIALYLIW-------------VFHGS---LSFTTPNG---HRISRFE

Query:  EVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRIS
          WL+   C E+V+  W+V +  S    +A K ++C   L+ WG++ TGNF  RI+
Subjt:  EVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRIS

A0A803P3J1 Uncharacterized protein5.4e-1428.57Show/hide
Query:  KPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGT-----TGVLQVFMVSLTMILTSDHGVSSVN
        +P  VFL ETK ++A +E V   LG+   F V + GRSGGLALLW ++    ++ +S NHID  ++ +G      TGV         M   +       N
Subjt:  KPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGT-----TGVLQVFMVSLTMILTSDHGVSSVN

Query:  CGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWM------------------------------------------LFASVWM----IALYLIWVFHG
          AP      W  I  L  +  +S   G     SW+                                          L +S W+     A  L   F  
Subjt:  CGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWM------------------------------------------LFASVWM----IALYLIWVFHG

Query:  S------LSFTTPN---GHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRI
        S      L    P+    +R  RFE  WL+ P C E+V   W+V N  S    LA K ++C   L+ WG++ TGNF  RI
Subjt:  S------LSFTTPN---GHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRI

B9G161 Reverse transcriptase domain-containing protein3.5e-1325.1Show/hide
Query:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWM------DWDGTTGVLQVFMVSLTMILTSDHG
        +QT++P+VVFLSET+ +Q  +E +++++G   C  V+  G+ GG+AL W   V  ++ SY+  HID  +       W  T    +       ++ T    
Subjt:  MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWM------DWDGTTGVLQVFMVSLTMILTSDHG

Query:  VSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLSFTTPNGHR-----------------ISRFEEVWLQSPE
        +        L+ R +  A+    +++Q  +      +     F SV          FHG + +T  N  R                   R+EEVW +   
Subjt:  VSSVNCGAPLIPRGWWGAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLSFTTPNGHR-----------------ISRFEEVWLQSPE

Query:  CPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQ
         PEV+ SAW  GN  ++   ++ K    M  L+ W + K GN   +I+    +++
Subjt:  CPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNFGSRISVASQRVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACTTATAAACCCCAGGTGGTGTTCTTGTCAGAAACGAAATTACACCAGGCGGAAATGGAAATTGTTCGCTATCGTTTGGGTTTCTCGAGTTGTTTCGTAGTTAG
TAGCTCTGGGCGAAGTGGGGGTCTGGCTCTTCTGTGGTCCTCGGAGGTGGGGTTTAGCCTTTTGTCCTATTCCCCAAATCATATTGATGGCTGGATGGACTGGGATGGCA
CCACTGGCGTTTTACAGGTTTTTATGGTTTCCCTGACGATGATTCTCACCTCCGATCATGGAGTCTCCTCCGTCAATTGCGGGGCTCCCCTGATACCCCGTGGTTGGTGG
GGGGCGATTTCAATGCTATTTTACATCACTCAGAGAAGTCAGGGGGGCGGGCCACACCAGAAAGTGTCTTGGATGCTTTTTGCTTCTGTTTGGATGATTGCTCTTTATCT
GATTTGGGTTTTTCATGGGAGTCTCTCCTTTACAACACCAAATGGACACCGAATTTCTCGCTTTGAGGAAGTTTGGCTACAGTCACCAGAGTGCCCTGAGGTGGTCTCCT
CTGCATGGCATGTAGGGAATGTTTGCTCTGACCCGTCTGGCCTGGCCCGAAAGACGAACATTTGTATGCGTAGTTTGAATGCTTGGGGGAGATCGAAGACGGGCAATTTT
GGGAGTCGCATTTCAGTGGCTTCTCAGCGAGTTCAGTTGGCTATCCAAAATCTGGGGAGTGCTCCCAATCGAGAGGAACTTTGTGAGGCGAGGCTGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGACTTATAAACCCCAGGTGGTGTTCTTGTCAGAAACGAAATTACACCAGGCGGAAATGGAAATTGTTCGCTATCGTTTGGGTTTCTCGAGTTGTTTCGTAGTTAG
TAGCTCTGGGCGAAGTGGGGGTCTGGCTCTTCTGTGGTCCTCGGAGGTGGGGTTTAGCCTTTTGTCCTATTCCCCAAATCATATTGATGGCTGGATGGACTGGGATGGCA
CCACTGGCGTTTTACAGGTTTTTATGGTTTCCCTGACGATGATTCTCACCTCCGATCATGGAGTCTCCTCCGTCAATTGCGGGGCTCCCCTGATACCCCGTGGTTGGTGG
GGGGCGATTTCAATGCTATTTTACATCACTCAGAGAAGTCAGGGGGGCGGGCCACACCAGAAAGTGTCTTGGATGCTTTTTGCTTCTGTTTGGATGATTGCTCTTTATCT
GATTTGGGTTTTTCATGGGAGTCTCTCCTTTACAACACCAAATGGACACCGAATTTCTCGCTTTGAGGAAGTTTGGCTACAGTCACCAGAGTGCCCTGAGGTGGTCTCCT
CTGCATGGCATGTAGGGAATGTTTGCTCTGACCCGTCTGGCCTGGCCCGAAAGACGAACATTTGTATGCGTAGTTTGAATGCTTGGGGGAGATCGAAGACGGGCAATTTT
GGGAGTCGCATTTCAGTGGCTTCTCAGCGAGTTCAGTTGGCTATCCAAAATCTGGGGAGTGCTCCCAATCGAGAGGAACTTTGTGAGGCGAGGCTGGCCTAG
Protein sequenceShow/hide protein sequence
MQTYKPQVVFLSETKLHQAEMEIVRYRLGFSSCFVVSSSGRSGGLALLWSSEVGFSLLSYSPNHIDGWMDWDGTTGVLQVFMVSLTMILTSDHGVSSVNCGAPLIPRGWW
GAISMLFYITQRSQGGGPHQKVSWMLFASVWMIALYLIWVFHGSLSFTTPNGHRISRFEEVWLQSPECPEVVSSAWHVGNVCSDPSGLARKTNICMRSLNAWGRSKTGNF
GSRISVASQRVQLAIQNLGSAPNREELCEARLA