; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010849 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010849
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L36
Genome locationchr1:7901505..7908467
RNA-Seq ExpressionLag0010849
SyntenyLag0010849
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5525490.1 hypothetical protein DKX38_023239 [Salix brachista]2.2e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

XP_004140771.1 60S ribosomal protein L36-2 [Cucumis sativus]2.2e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

XP_037424300.1 uncharacterized protein LOC119288933 isoform X1 [Triticum dicoccoides]7.7e-1775.71Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLP
        K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA +VA++KLGTHKRA KKKRGDVQC  +D+  P
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLP

XP_037424301.1 uncharacterized protein LOC119288933 isoform X2 [Triticum dicoccoides]7.7e-1775.71Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLP
        K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA +VA++KLGTHKRA KKKRGDVQC  +D+  P
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLP

XP_037424302.1 uncharacterized protein LOC119288933 isoform X3 [Triticum dicoccoides]7.7e-1772.97Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLPIGMG
        K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA +VA++KLGTHKRA KKKRGDVQC  +D+ L    G
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRA-KKKRGDVQCSSQDKSLPIGMG

TrEMBL top hitse value%identityAlignment
A0A0A0L6L0 60S ribosomal protein L361.1e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

A0A1S3AYD7 60S ribosomal protein L361.1e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

A0A5A7UN62 60S ribosomal protein L361.1e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

A0A6J1H2C5 60S ribosomal protein L361.1e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

A9P9I5 60S ribosomal protein L361.1e-1683.87Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAKKKR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-16.1e-1774.19Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

P52866 60S ribosomal protein L364.9e-1464.29Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAK-KKRGDVQCSSQDK
        R  K+SKR  FVR LIREVAGF PYE+RIT+LLKVGKDKRAL+V + K+G  + +K ++RGDVQCS  D+
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAK-KKRGDVQCSSQDK

Q9LRB8 60S ribosomal protein L361.6e-1266.67Show/hide
Query:  SKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        S+RV  VR ++REVAG+APYERR+ +LLKVGKDKRAL++ +RKLGTH R KKKR ++
Subjt:  SKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

Q9LZ57 60S ribosomal protein L36-33.0e-1672.58Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

Q9M352 60S ribosomal protein L36-21.8e-1671.88Show/hide
Query:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R R  K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein4.4e-1874.19Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

AT2G37600.2 Ribosomal protein L36e family protein4.4e-1874.19Show/hide
Query:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R  K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

AT3G53740.2 Ribosomal protein L36e family protein1.3e-1771.88Show/hide
Query:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R R  K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

AT3G53740.3 Ribosomal protein L36e family protein1.3e-1771.88Show/hide
Query:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R R  K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV

AT3G53740.4 Ribosomal protein L36e family protein1.3e-1771.88Show/hide
Query:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV
        R R  K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRAL+VA+RKLGTHKRAK+KR ++
Subjt:  RFRLWKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCGACCAATCGTCGGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACGGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATGGTTTCAAGCAATGGGTTTTTACTCTCCTTTGACTTTTCGGCATGTGGATTCGCGGCCAACACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGCA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGATTTTGATTCGGGAAGTTGCTGGCTTTGCACCATATGAG
AGGAGAATCACTAAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAGAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGGAGATGTCCA
GTGTTCTTCGCAAGATAAGAGTCTTCCAATTGGTATGGGATATCCCAGAGTCTTGAGTCTTGTTGTTGATCGTCCCAAAAGATGTTGCAGGGCGGAGGAAGACCTCGATC
ATATTTTGTGGAGCTGCGCCTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTTGTTCGGTTTGCAGTTTGCCAGACACAGTTGCCTCAGAGAGACGATCGAGGAGTTC
CTTCCCACCCTCCTTTCAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGGTATTATTTGGGGTTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGTGGC
TTTATGTGTTTGGAGTCTTGTGAATCCAATGAATGTGGATCCAATGAATGGATTTGGTGATCAATTCATCAATGAGGGTCTAGAAAAATTTTGGGTTATTCCTATGTATG
TTGTTATGCTGTTGAAATTTTCGGAGCACTCAGTTAGTTTTAGTAATGTCGTTAGAAACCACGAACTGTTATGCAACTACAAGGGAGAGACGAGCCTGCTATCGACTGCA
AAGGGGAGGACGAGGACGGCTGCACTGGAACTGCTATCGACTGCAAAGGGAGAACTTCTATGTGACTGCAAGCGAATCAACTGTGTTCTGTTTGATTGCACGACTGTAAT
CGATTGCAAGGCTGAAATCGAGAACGAAAAGAGTGAGATCGAGAGACGTTCAGCTGGAATCGAAGGACTGGCGATGTGCGTGTCTATGGCGTGCGACTGGAATCGAAGGA
GAAGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCGACCAATCGTCGGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACGGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATGGTTTCAAGCAATGGGTTTTTACTCTCCTTTGACTTTTCGGCATGTGGATTCGCGGCCAACACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGCA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGATTTTGATTCGGGAAGTTGCTGGCTTTGCACCATATGAG
AGGAGAATCACTAAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAGAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGGAGATGTCCA
GTGTTCTTCGCAAGATAAGAGTCTTCCAATTGGTATGGGATATCCCAGAGTCTTGAGTCTTGTTGTTGATCGTCCCAAAAGATGTTGCAGGGCGGAGGAAGACCTCGATC
ATATTTTGTGGAGCTGCGCCTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTTGTTCGGTTTGCAGTTTGCCAGACACAGTTGCCTCAGAGAGACGATCGAGGAGTTC
CTTCCCACCCTCCTTTCAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGGTATTATTTGGGGTTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGTGGC
TTTATGTGTTTGGAGTCTTGTGAATCCAATGAATGTGGATCCAATGAATGGATTTGGTGATCAATTCATCAATGAGGGTCTAGAAAAATTTTGGGTTATTCCTATGTATG
TTGTTATGCTGTTGAAATTTTCGGAGCACTCAGTTAGTTTTAGTAATGTCGTTAGAAACCACGAACTGTTATGCAACTACAAGGGAGAGACGAGCCTGCTATCGACTGCA
AAGGGGAGGACGAGGACGGCTGCACTGGAACTGCTATCGACTGCAAAGGGAGAACTTCTATGTGACTGCAAGCGAATCAACTGTGTTCTGTTTGATTGCACGACTGTAAT
CGATTGCAAGGCTGAAATCGAGAACGAAAAGAGTGAGATCGAGAGACGTTCAGCTGGAATCGAAGGACTGGCGATGTGCGTGTCTATGGCGTGCGACTGGAATCGAAGGA
GAAGTAACTGA
Protein sequenceShow/hide protein sequence
MIPTNRRRATTLGRRLGWQWAVAATGLQVFGDSAVHLRLLMVSSNGFLLSFDFSACGFAANTLPFTLLSGSVGRSLISSNFVRFRLWKSSKRVLFVRILIREVAGFAPYE
RRITKLLKVGKDKRALEVARRKLGTHKRAKKKRGDVQCSSQDKSLPIGMGYPRVLSLVVDRPKRCCRAEEDLDHILWSCAFARTVWDEFFGLFGLQFARHSCLRETIEEF
LPTLLSGSKESFCGKLGFVVLFGVCGVRETIELLEVALCVWSLVNPMNVDPMNGFGDQFINEGLEKFWVIPMYVVMLLKFSEHSVSFSNVVRNHELLCNYKGETSLLSTA
KGRTRTAALELLSTAKGELLCDCKRINCVLFDCTTVIDCKAEIENEKSEIERRSAGIEGLAMCVSMACDWNRRRSN