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Lag0010850 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010850
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr1:7908694..7910649
RNA-Seq ExpressionLag0010850
SyntenyLag0010850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032948.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Cucumis melo var. makuwa]4.2e-0650.82Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        T++ T  +  + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

KAA0039559.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-0650.82Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        T++ T     + S YK+RR+++++LE+ N+ DRYLSD  EELND FDVL WWK+NE++  I
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

KAA0049643.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-0656.86Show/hide
Query:  IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

KAA0057144.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.0e-0750.79Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAIPT
        T++ T     + S YKKRR+++++LE+ ND DRYLSD  EELND FDVL WWK+N++ +++P+
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAIPT

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]5.5e-0648.61Show/hide
Query:  SQQSSVVTSINTADDED----IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        S  S  V S  T  + D    + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  SQQSSVVTSINTADDED----IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

TrEMBL top hitse value%identityAlignment
A0A5A7SQX7 Zinc finger BED domain-containing protein RICESLEEPER 22.0e-0650.82Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        T++ T  +  + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

A0A5A7TEA9 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.3e-0750.82Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        T++ T     + S YK+RR+++++LE+ N+ DRYLSD  EELND FDVL WWK+NE++  I
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

A0A5A7UPL3 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.8e-0850.79Show/hide
Query:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAIPT
        T++ T     + S YKKRR+++++LE+ ND DRYLSD  EELND FDVL WWK+N++ +++P+
Subjt:  TSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAIPT

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.6e-0648.61Show/hide
Query:  SQQSSVVTSINTADDED----IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        S  S  V S  T  + D    + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  SQQSSVVTSINTADDED----IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

A0A5D3CC79 Ty3-gypsy retrotransposon protein7.0e-0756.86Show/hide
Query:  IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI
        + S YK+RR+++++LE+ ND DRYLSD  EELND FDVL WWK+N ++  I
Subjt:  IQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGATTTTTTCAAAATAACCGAACCAAACCACTGGATCGGTTTGGTTCGGTTCGGTTCGTCGGTTTTTCGGTTTCTACTTGCACTCCTAGTAGTGGTGGTGGTTC
TCAACAATCAAGCGTTGTCACTAGTATAAACACTGCAGATGATGAAGATATACAGTCTAATTATAAGAAAAGAAGAGAAGACGAGAGTTCATTGGAAGTGGAGAATGACT
TCGATCGATATTTGTCTGACAAGAATGAGGAACTTAATGATAGTTTTGATGTTTTATATTGGTGGAAAGTGAATGAGCTCGAAACAGCGATTCCAACGCCTTTTGAATCA
CTCAAATCGGAGCTCAAACGAAGAAGTTATGGCCAAAACAAAATTGATGAAGAAAATCCAACGTGGCATGACACGTGGCAAGCTGATGATGTGGCATCCGACGTGGCACG
CAAACCGGTCAAAATTGATGACGTGAAAGCTTACGTGGCGGATGACGTGGCACTCCAACGGTCACTTTTTGCTGACGTGGCGATGACGTGGAATGTGACGTGGTTGTTGA
CGTGGCAATCGTGGACCAATAGAAAATGGACACGTGGCGAGCTGTTAAATAATAAAAAAAGAAGAAAAAGAGGAGAAATCGTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGATTTTTTCAAAATAACCGAACCAAACCACTGGATCGGTTTGGTTCGGTTCGGTTCGTCGGTTTTTCGGTTTCTACTTGCACTCCTAGTAGTGGTGGTGGTTC
TCAACAATCAAGCGTTGTCACTAGTATAAACACTGCAGATGATGAAGATATACAGTCTAATTATAAGAAAAGAAGAGAAGACGAGAGTTCATTGGAAGTGGAGAATGACT
TCGATCGATATTTGTCTGACAAGAATGAGGAACTTAATGATAGTTTTGATGTTTTATATTGGTGGAAAGTGAATGAGCTCGAAACAGCGATTCCAACGCCTTTTGAATCA
CTCAAATCGGAGCTCAAACGAAGAAGTTATGGCCAAAACAAAATTGATGAAGAAAATCCAACGTGGCATGACACGTGGCAAGCTGATGATGTGGCATCCGACGTGGCACG
CAAACCGGTCAAAATTGATGACGTGAAAGCTTACGTGGCGGATGACGTGGCACTCCAACGGTCACTTTTTGCTGACGTGGCGATGACGTGGAATGTGACGTGGTTGTTGA
CGTGGCAATCGTGGACCAATAGAAAATGGACACGTGGCGAGCTGTTAAATAATAAAAAAAGAAGAAAAAGAGGAGAAATCGTTGATTGA
Protein sequenceShow/hide protein sequence
MSRFFQNNRTKPLDRFGSVRFVGFSVSTCTPSSGGGSQQSSVVTSINTADDEDIQSNYKKRREDESSLEVENDFDRYLSDKNEELNDSFDVLYWWKVNELETAIPTPFES
LKSELKRRSYGQNKIDEENPTWHDTWQADDVASDVARKPVKIDDVKAYVADDVALQRSLFADVAMTWNVTWLLTWQSWTNRKWTRGELLNNKKRRKRGEIVD