; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010852 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010852
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:7961631..7962880
RNA-Seq ExpressionLag0010852
SyntenyLag0010852
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]2.2e-0926.06Show/hide
Query:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTI-KERRDWWRFTSILG-PEIKTKE-------------IQPEKGSTDFFANPQMMERAYGMKVEHSEF
        V+ EG  GGL+L+W  + ++ + S SK HVD  +  E   +WR T + G PE + K+               P     DF     + E+  G +   +E 
Subjt:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTI-KERRDWWRFTSILG-PEIKTKE-------------IQPEKGSTDFFANPQMMERAYGMKVEHSEF

Query:  HHSDHRAIVLDIQWDRVDLHTSNNH--------GVPVKEPQISTTL-----GKI--QKGLEAMKSWNKE---------RLKGTLKGAIHTKEEEIK---R
          ++ R  + D   D  DL +   H        G  + E ++   L     G    +K    + SW+ +         R     +G  +TK    K   R
Subjt:  HHSDHRAIVLDIQWDRVDLHTSNNH--------GVPVKEPQISTTL-----GKI--QKGLEAMKSWNKE---------RLKGTLKGAIHTKEEEIK---R

Query:  KKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
        +K+N I+GI DE G W E  E +     ++F  +  +   +   + A +  + +K+S +   +LD  FT +EI  AL  M PTK
Subjt:  KKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

XP_030495108.1 uncharacterized protein LOC115710895 [Cannabis sativa]2.9e-0924.47Show/hide
Query:  NVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRDW-WRFTSILGP--------------EIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHSE
        +V+ +G+SGGL+L+W   +++ + S +  H+D  ++    + WRFT   G                +KT          DF       ER    K   S 
Subjt:  NVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRDW-WRFTSILGP--------------EIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHSE

Query:  FHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKERLKGTLKGAIHTKEE------------------------EIKRKK
        FH     A   D Q  ++   T    GV      +   L     GL     WNK++    +  +   KE+                           R+K
Subjt:  FHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKERLKGTLKGAIHTKEE------------------------EIKRKK

Query:  RNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
        +N I+G+ DE  +W   DE++ N A ++FKKL +S        E +   +  ++S +   RL  PFT DE++ A+  ++P K
Subjt:  RNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

XP_030926688.1 uncharacterized protein LOC115953246 [Quercus lobata]7.2e-0823.83Show/hide
Query:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIK-----------------ERRDWWRFTSILGPEIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHS
        V    R GGL+L+W+++ SI V+S S  H+D  +                  ER DW                          AN   + +    +V+H 
Subjt:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIK-----------------ERRDWWRFTSILGPEIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHS

Query:  EFHHSDHRAIVLDI-------QWDR----------VDLHTSN------------------NHGVPVKEPQISTTLGKIQKGLEAMKSW-NKERLKGTLKG
            SDHR ++L +       +W R           DL   +                  N G P +  Q+ T L  +    E M  W  +  +K    G
Subjt:  EFHHSDHRAIVLDI-------QWDR----------VDLHTSN------------------NHGVPVKEPQISTTLGKIQKGLEAMKSW-NKERLKGTLKG

Query:  AIHTK---EEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
          +TK       +RK+RN IKG+ DE G W   +E +    + ++ KL  S   N + ++ V+  +   +S +   +L   +T +E+E+A+K M P K
Subjt:  AIHTK---EEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

XP_030970961.1 uncharacterized protein LOC115991405 [Quercus lobata]2.7e-0744.09Show/hide
Query:  HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
        HTK  E  RKK+N I  ILDE+G W ES  EI   A ++F+KL  +   N   I  VV  I  K+S +  + L   FT +E+E ALK M+P+K
Subjt:  HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

XP_040940062.1 uncharacterized protein LOC121211372 [Gossypium hirsutum]1.6e-0726.07Show/hide
Query:  MNVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPEIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHSEFHHSDHRAIVLD
        +++   G  G LSL W     + + S S  HVDV + E      WR T                    F+ +P   E  + + +E S     +       
Subjt:  MNVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPEIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHSEFHHSDHRAIVLD

Query:  IQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAMKS---WNKERLKGTLKGAIHTKE----EEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFF
           D +DL  S     P  +  +  T  ++Q  LEA K    W +      LK   H  +        ++K N IKG++++ G WVE ++ I  T S +F
Subjt:  IQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAMKS---WNKERLKGTLKGAIHTKE----EEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFF

Query:  KKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTKVWVL
        K +  +   +K +   +   + M I+ND   +L   FT++EI VA+K M P K + L
Subjt:  KKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTKVWVL

TrEMBL top hitse value%identityAlignment
A0A2N9FNQ8 Uncharacterized protein2.7e-0824.84Show/hide
Query:  GRSGGLSLMWQNQHSIMVNSSSKGHVDVTI-KERRDWWRFTSILG-PE-------------IKTKEIQPEKGSTDFFANPQMMERAYG------MKVEHS
        GRSGGL+L+W+N+  I++ + S+ H+D  +  ++   WR T   G PE             + T +  P     DF     + E+  G        +E  
Subjt:  GRSGGLSLMWQNQHSIMVNSSSKGHVDVTI-KERRDWWRFTSILG-PE-------------IKTKEIQPEKGSTDFFANPQMMERAYG------MKVEHS

Query:  EFHH----SDHRAIVLDIQWDRVD-----------------------LHTSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKERLKG-TLKGAIHTK---
        E  +    SDH A+V+  +  +V                        + +S N    V  P       KI +   A+  WN++     TL+  +H +   
Subjt:  EFHH----SDHRAIVLDIQWDRVD-----------------------LHTSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKERLKG-TLKGAIHTK---

Query:  ----------------EEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALK
                        ++  +R+ +N I+GILD  GRW E ++ +G  A  +F  + +S       +E  V VI   ++ D   +L SPFT  EI+ A  
Subjt:  ----------------EEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALK

Query:  SMNPTK
         M+P+K
Subjt:  SMNPTK

A0A2N9GN35 Uncharacterized protein5.0e-0721.49Show/hide
Query:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPE--------------IKTKEIQPEKGSTDF------------FANPQMM
        V   G+SGGL+L+W  + ++ ++S S  H+D  + E  +  WW FT   G                ++     P     DF             A P+  
Subjt:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPE--------------IKTKEIQPEKGSTDF------------FANPQMM

Query:  ERAYGMKVEHSEF------HHSDHRAIVLDIQ---------------WDRVDLH-----------TSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKER
         R + + ++   F        SDHR + ++++                +   LH            +   G P+ +      + KI+   E +K W+ ++
Subjt:  ERAYGMKVEHSEF------HHSDHRAIVLDIQ---------------WDRVDLH-----------TSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKER

Query:  LKGTLKGAI---------------------------------HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVV
          G+++ AI                                 H+KEE+I+R  RN I GI D+ G W   DE + N    +++ L  +   +    + ++
Subjt:  LKGTLKGAI---------------------------------HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVV

Query:  SVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
          +   ++N+   +LDS FT  E+E  LK M P K
Subjt:  SVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

A0A2N9GXF5 Uncharacterized protein5.0e-0721.49Show/hide
Query:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPE--------------IKTKEIQPEKGSTDF------------FANPQMM
        V   G+SGGL+L+W  + ++ ++S S  H+D  + E  +  WW FT   G                ++     P     DF             A P+  
Subjt:  VSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRD--WWRFTSILGPE--------------IKTKEIQPEKGSTDF------------FANPQMM

Query:  ERAYGMKVEHSEF------HHSDHRAIVLDIQ---------------WDRVDLH-----------TSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKER
         R + + ++   F        SDHR + ++++                +   LH            +   G P+ +      + KI+   E +K W+ ++
Subjt:  ERAYGMKVEHSEF------HHSDHRAIVLDIQ---------------WDRVDLH-----------TSNNHGVPVKEPQISTTLGKIQKGLEAMKSWNKER

Query:  LKGTLKGAI---------------------------------HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVV
          G+++ AI                                 H+KEE+I+R  RN I GI D+ G W   DE + N    +++ L  +   +    + ++
Subjt:  LKGTLKGAI---------------------------------HTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVV

Query:  SVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
          +   ++N+   +LDS FT  E+E  LK M P K
Subjt:  SVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

A0A2P5CMT2 Uncharacterized protein3.0e-0729.34Show/hide
Query:  GMKVEHSEFHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAM-KSWNKERLKGTLKGAIHTKEEEIKRKKRNEIKGILDEKGRWV
        G  VEH +++ SDHRA+   +Q      H   + GVP+       +L  I   LE + + +++ + K               R+  N+I+ + D  G+ V
Subjt:  GMKVEHSEFHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQISTTLGKIQKGLEAM-KSWNKERLKGTLKGAIHTKEEEIKRKKRNEIKGILDEKGRWV

Query:  ESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK
        ESD+++    SN+F  L  +  ++  + + V+S I+  IS D    L  PFT  ++ +ALKSM P K
Subjt:  ESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRRLDSPFTIDEIEVALKSMNPTK

A0A6P4MF11 uncharacterized protein LOC1084586463.0e-0723.99Show/hide
Query:  MNVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKE--RRDWWRFTSILGP-------------------------------EI-----KTKEIQPEK
        +++  EG  GGLSL W+ + ++++ S SK H+DV IKE   ++ WRFT   G                                EI     K+  IQ E+
Subjt:  MNVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKE--RRDWWRFTSILGP-------------------------------EI-----KTKEIQPEK

Query:  GSTDFF---------------------------------------ANPQMMERAYGMKVEHSEFHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQIST
        G  + F                                       AN + M       + H  +  SDHR ++L+   D  +        +   +  ++ 
Subjt:  GSTDFF---------------------------------------ANPQMMERAYGMKVEHSEFHHSDHRAIVLDIQWDRVDLHTSNNHGVPVKEPQIST

Query:  TLGKIQKGLEAMKSWNKERLKGTLKGAIHTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRR
         + K +   E     N  R      G  H       RK+ N I  +  + GR +    EI   A+ FF++L  +  +   S   ++ +++ KIS++Q   
Subjt:  TLGKIQKGLEAMKSWNKERLKGTLKGAIHTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQRRR

Query:  LDSPFTIDEIEVALKSMNPTK
        L SPFT++EI++ALK M PTK
Subjt:  LDSPFTIDEIEVALKSMNPTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTAAGTTGTGAGGGAAGAAGTGGCGGGCTGAGTCTTATGTGGCAAAATCAGCATAGCATTATGGTTAACTCTTCCTCCAAGGGTCACGTTGATGTGACGATTAA
AGAAAGGAGAGATTGGTGGAGATTCACAAGTATACTTGGGCCAGAAATAAAAACAAAGGAGATTCAACCAGAGAAAGGCTCGACAGATTTTTTTGCTAATCCTCAAATGA
TGGAAAGAGCTTACGGTATGAAAGTAGAACACTCCGAATTTCACCATTCGGATCATAGGGCGATAGTGCTGGACATTCAATGGGACAGGGTGGACTTACACACTTCTAAT
AATCATGGAGTTCCAGTGAAAGAACCACAAATTTCAACCACTCTGGGAAAAATCCAAAAGGGTCTGGAGGCTATGAAAAGCTGGAATAAAGAAAGATTAAAGGGAACTCT
CAAAGGAGCCATTCATACAAAAGAGGAAGAAATCAAGAGGAAGAAAAGGAATGAAATAAAAGGCATCCTCGATGAGAAAGGAAGATGGGTGGAATCAGATGAGGAAATAG
GCAATACGGCTTCAAATTTCTTCAAGAAGTTGTTAAATTCTGGTATGCTTAATAAAAGAAGTATTGAAGCAGTGGTTTCAGTCATTAGTATGAAAATTTCTAATGACCAA
AGGAGAAGGTTGGACAGCCCATTTACTATAGATGAGATTGAAGTCGCTCTCAAGAGTATGAATCCTACTAAGGTCTGGGTCCTGATGGTGCCCATGCGCTGCTTTATCAA
AAGTTCTGGGATGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTAAGTTGTGAGGGAAGAAGTGGCGGGCTGAGTCTTATGTGGCAAAATCAGCATAGCATTATGGTTAACTCTTCCTCCAAGGGTCACGTTGATGTGACGATTAA
AGAAAGGAGAGATTGGTGGAGATTCACAAGTATACTTGGGCCAGAAATAAAAACAAAGGAGATTCAACCAGAGAAAGGCTCGACAGATTTTTTTGCTAATCCTCAAATGA
TGGAAAGAGCTTACGGTATGAAAGTAGAACACTCCGAATTTCACCATTCGGATCATAGGGCGATAGTGCTGGACATTCAATGGGACAGGGTGGACTTACACACTTCTAAT
AATCATGGAGTTCCAGTGAAAGAACCACAAATTTCAACCACTCTGGGAAAAATCCAAAAGGGTCTGGAGGCTATGAAAAGCTGGAATAAAGAAAGATTAAAGGGAACTCT
CAAAGGAGCCATTCATACAAAAGAGGAAGAAATCAAGAGGAAGAAAAGGAATGAAATAAAAGGCATCCTCGATGAGAAAGGAAGATGGGTGGAATCAGATGAGGAAATAG
GCAATACGGCTTCAAATTTCTTCAAGAAGTTGTTAAATTCTGGTATGCTTAATAAAAGAAGTATTGAAGCAGTGGTTTCAGTCATTAGTATGAAAATTTCTAATGACCAA
AGGAGAAGGTTGGACAGCCCATTTACTATAGATGAGATTGAAGTCGCTCTCAAGAGTATGAATCCTACTAAGGTCTGGGTCCTGATGGTGCCCATGCGCTGCTTTATCAA
AAGTTCTGGGATGTGGTAG
Protein sequenceShow/hide protein sequence
MNVSCEGRSGGLSLMWQNQHSIMVNSSSKGHVDVTIKERRDWWRFTSILGPEIKTKEIQPEKGSTDFFANPQMMERAYGMKVEHSEFHHSDHRAIVLDIQWDRVDLHTSN
NHGVPVKEPQISTTLGKIQKGLEAMKSWNKERLKGTLKGAIHTKEEEIKRKKRNEIKGILDEKGRWVESDEEIGNTASNFFKKLLNSGMLNKRSIEAVVSVISMKISNDQ
RRRLDSPFTIDEIEVALKSMNPTKVWVLMVPMRCFIKSSGMW