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Lag0010877 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010877
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:8485829..8487301
RNA-Seq ExpressionLag0010877
SyntenyLag0010877
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]1.0e-1141.84Show/hide
Query:  ETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL
        +T +++     L+  A  W  F+K +L+PT+H++TVS +R+LL+  I+ S  +DVG+II  +++DC  KK   L FPN IT LCR+  V EN  D  L
Subjt:  ETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.7e-1241.8Show/hide
Query:  EAVETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDD
        E ++      +   L   A  W  F+K RLLPTTH  TVS++R+LL+  +L   S++VG++I SEI  C  +K G LFFP+ IT LCR  RA  L NE+ 
Subjt:  EAVETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDD

Query:  VTLIDKGIIDTPNLVRLQRTQE
        + +   G ID   + R+  TQE
Subjt:  VTLIDKGIIDTPNLVRLQRTQE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.6e-1246.23Show/hide
Query:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTLIDKGIIDTPNLVR
        L   A  W  F+K RLLPTTH   VS++R+LL+  +L   S++VG++I SEI  C  +K G LFFP+ IT LCR A  L NE+   L + G ID   + R
Subjt:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTLIDKGIIDTPNLVR

Query:  LQRTQE
        +  TQE
Subjt:  LQRTQE

TYI22425.1 hypothetical protein ES332_A06G102500v1 [Gossypium tomentosum]6.2e-1242.22Show/hide
Query:  HTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENED
        H+ Q  YLK  A  W  FV+   +P +H ST+   ++L + +IL   S++VGKII  EI+DC +KK+G  +FP+ IT +C RA V   E+
Subjt:  HTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENED

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.1e-1334.93Show/hide
Query:  TFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL---IDKG
        T++A+ LK  AN W+ F++  L PTTHDS++S  +++L+  ++   +++VGK++   I  C +++ GKLFFP+ I  L  +AGV E  DD+ +    +K 
Subjt:  TFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL---IDKG

Query:  IIDTPNLVRLQRTQEAHQGGLLCGIHQIQEQLHMHS-SRMEFAERQ
         ID   + +L+   E  +G  L G+ +  E+L   S S M+F   Q
Subjt:  IIDTPNLVRLQRTQEAHQGGLLCGIHQIQEQLHMHS-SRMEFAERQ

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)8.7e-1246.6Show/hide
Query:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDDVTLIDKGIIDTPNL
        L   A  W  F+K RLLPTTH  TVS++R+LL+  +L   S++VG++I SEI  C  +K G LFFP+ IT LCR  RA  L NE+   L + G ID   +
Subjt:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDDVTLIDKGIIDTPNL

Query:  VRL
         R+
Subjt:  VRL

A0A2P5CEY2 Uncharacterized protein2.3e-1241.8Show/hide
Query:  EAVETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDD
        E ++      +   L   A  W  F+K RLLPTTH  TVS++R+LL+  +L   S++VG++I SEI  C  +K G LFFP+ IT LCR  RA  L NE+ 
Subjt:  EAVETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCR--RAGVLENEDD

Query:  VTLIDKGIIDTPNLVRLQRTQE
        + +   G ID   + R+  TQE
Subjt:  VTLIDKGIIDTPNLVRLQRTQE

A0A2P5DXM3 Uncharacterized protein1.7e-1246.23Show/hide
Query:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTLIDKGIIDTPNLVR
        L   A  W  F+K RLLPTTH   VS++R+LL+  +L   S++VG++I SEI  C  +K G LFFP+ IT LCR A  L NE+   L + G ID   + R
Subjt:  LKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTLIDKGIIDTPNLVR

Query:  LQRTQE
        +  TQE
Subjt:  LQRTQE

A0A5D2Q4A4 Uncharacterized protein3.0e-1242.22Show/hide
Query:  HTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENED
        H+ Q  YLK  A  W  FV+   +P +H ST+   ++L + +IL   S++VGKII  EI+DC +KK+G  +FP+ IT +C RA V   E+
Subjt:  HTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENED

A0A6A2Y697 Reverse transcriptase domain-containing protein5.1e-1241.84Show/hide
Query:  ETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL
        +T +++     L+  A  W  F+K +L+PT+H++TVS +R+LL+  I+ S  +DVG+II  +++DC  KK   L FPN IT LCR+  V EN  D  L
Subjt:  ETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVSRNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAAAGAGACAACGAGGAAGATGAGGTTGTGGACGATGTTGCTGCCACAGTGGTTGAAGAAAACCCAAAGAACCAGAAGAGAAAAAT
CCAGAGCAGACTGAGCCGAGAATTGCAGATACAGAGGAAGTTCAAGAAAGAAATACAGAGGAGGTTCAAGAAAAACAGAATGAGGATGTGCGAGAAGAATAGGCAGAGGA
TGCGCCTACAGAAGGTAATGAGCAAGAACATGAAACTCGAGTGGAGGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGTTGAAACTGACGAGACTGAGGAGCCGAGA
TTATCGTACAACCGCTTCATCAATAATCTTGCTCGGGAAAAATACATAGAAATGCTGAAACAAGACTTTCTATTCGAACAGGGTTTTGGCGATGATCTACCACGGTTCTT
GAGATCTGGAATAGCGAACCATGGCTGGAATGGTGGTGGCACCATCGAGCGATCAATTGAATGCGACTGTCCGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGGCTGTCG
AAACAGAAAAGCATACATTTCAAGCTGCTTATCTGAAAAGTGAGGCCAATACATGGATGGGCTTCGTCAAGCTACGCTTACTGCCGACAACTCACGATTCAACGGTGTCT
CGGAATCGGGTACTGCTTGTGCTTATCATTCTTCGTTCAATGAGTGTTGATGTGGGTAAAATAATTTCTTCTGAGATTTATGATTGCAGGCGGAAAAAGGTTGGGAAGTT
GTTTTTCCCCAACACTATCACAATGTTATGCCGAAGGGCAGGGGTTCTAGAGAATGAGGATGATGTAACTCTGATAGACAAGGGAATAATCGACACACCAAATTTGGTCA
GGCTTCAAAGGACACAAGAAGCACACCAAGGAGGATTGTTGTGCGGCATCCACCAAATACAAGAGCAATTACATATGCATTCAAGTAGAATGGAGTTTGCCGAAAGGCAA
TTCCAGACTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAAAGAGACAACGAGGAAGATGAGGTTGTGGACGATGTTGCTGCCACAGTGGTTGAAGAAAACCCAAAGAACCAGAAGAGAAAAAT
CCAGAGCAGACTGAGCCGAGAATTGCAGATACAGAGGAAGTTCAAGAAAGAAATACAGAGGAGGTTCAAGAAAAACAGAATGAGGATGTGCGAGAAGAATAGGCAGAGGA
TGCGCCTACAGAAGGTAATGAGCAAGAACATGAAACTCGAGTGGAGGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGTTGAAACTGACGAGACTGAGGAGCCGAGA
TTATCGTACAACCGCTTCATCAATAATCTTGCTCGGGAAAAATACATAGAAATGCTGAAACAAGACTTTCTATTCGAACAGGGTTTTGGCGATGATCTACCACGGTTCTT
GAGATCTGGAATAGCGAACCATGGCTGGAATGGTGGTGGCACCATCGAGCGATCAATTGAATGCGACTGTCCGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGGCTGTCG
AAACAGAAAAGCATACATTTCAAGCTGCTTATCTGAAAAGTGAGGCCAATACATGGATGGGCTTCGTCAAGCTACGCTTACTGCCGACAACTCACGATTCAACGGTGTCT
CGGAATCGGGTACTGCTTGTGCTTATCATTCTTCGTTCAATGAGTGTTGATGTGGGTAAAATAATTTCTTCTGAGATTTATGATTGCAGGCGGAAAAAGGTTGGGAAGTT
GTTTTTCCCCAACACTATCACAATGTTATGCCGAAGGGCAGGGGTTCTAGAGAATGAGGATGATGTAACTCTGATAGACAAGGGAATAATCGACACACCAAATTTGGTCA
GGCTTCAAAGGACACAAGAAGCACACCAAGGAGGATTGTTGTGCGGCATCCACCAAATACAAGAGCAATTACATATGCATTCAAGTAGAATGGAGTTTGCCGAAAGGCAA
TTCCAGACTTTCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEDEVVDDVAATVVEENPKNQKRKIQSRLSRELQIQRKFKKEIQRRFKKNRMRMCEKNRQRMRLQKVMSKNMKLEWREDKGKGIAEASVETDETEEPR
LSYNRFINNLAREKYIEMLKQDFLFEQGFGDDLPRFLRSGIANHGWNGGGTIERSIECDCPRGWHRGGSVEAVETEKHTFQAAYLKSEANTWMGFVKLRLLPTTHDSTVS
RNRVLLVLIILRSMSVDVGKIISSEIYDCRRKKVGKLFFPNTITMLCRRAGVLENEDDVTLIDKGIIDTPNLVRLQRTQEAHQGGLLCGIHQIQEQLHMHSSRMEFAERQ
FQTF