; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011004 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011004
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:12073278..12073610
RNA-Seq ExpressionLag0011004
SyntenyLag0011004
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019156592.1 PREDICTED: uncharacterized protein LOC109153209 [Ipomoea nil]3.1e-2957.41Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF+ GWVDL+  CV+TV+++  +NG   G +K +RG+RQGDPLSPYLF++CAEGLS +   AEA   + GV++ R  PTI+HLFFADDSLLF RA E E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A+ + E L
Subjt:  ARRVPEIL

XP_019157468.1 PREDICTED: uncharacterized protein LOC109154044 [Ipomoea nil]1.0e-2754.63Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        +GFE+ WV+L+  CV+T+ ++  +NG   G V+ SRG+RQGDPLSPYLF++CAEGLS +   AEA   I GV++ R  PT++HLFFADDSLLF RA ++E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
          +V E L
Subjt:  ARRVPEIL

XP_019163454.1 PREDICTED: uncharacterized protein LOC109159798 [Ipomoea nil]3.8e-2753.7Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        +GF QGW++L+  CV+TV ++  +NG   G V  +RG+RQGDPLSPYLF+LCAEGLS +   AEA   I G+++ R  P++SHLFFADDSLLF RA   E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A+ + + L
Subjt:  ARRVPEIL

XP_019183755.1 PREDICTED: uncharacterized protein LOC109178674 [Ipomoea nil]1.5e-2857.41Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        +GF+ GWVDL+  CV+TV ++  +NG   G VK +RG+RQGDPLSPYLF++CAEGLS +   AEA   I GV++ R  PTI+HLFFADDSLLF RA E E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A+ + + L
Subjt:  ARRVPEIL

XP_019198078.1 PREDICTED: uncharacterized protein LOC109191859 [Ipomoea nil]5.9e-2857.41Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        +GF++ WVDL+  CV+TV +S  +NG   G V+ +RG+RQGDPLSPYLF+LCAEGLS +   AEA   I GV++ R  P I+HLFFADDSLLF RAKE E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A ++ + L
Subjt:  ARRVPEIL

TrEMBL top hitse value%identityAlignment
A0A5B7BN08 Reverse transcriptase domain-containing protein3.1e-2756.48Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF Q WVDLI  CVSTV FS  ING   G +K +RGLRQGDPLSPYLF+LCAE  S++   +E  ++I G+ + R  P +SHLFFADDSLLF  A E +
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A  +  I+
Subjt:  ARRVPEIL

A0A6P6VL95 uncharacterized protein LOC1137239732.4e-2756.48Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF   WV+ I  C+STV +SFNING     V  SRG+RQGDPLSPYLFLLC+EGLSS+   A+    ++G+K+ R+ PTI+HLFFADDSL+F +A ++E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A ++  IL
Subjt:  ARRVPEIL

A0A6P6W2K9 uncharacterized protein LOC1137290303.1e-2753.7Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF   W+D I  C++TV +SFN NG   G V   RG+RQ DPLSPYLFL+C+EG S++P  AE + RI+GVK++RQ P ++HLFFADDSL+F +A ++E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        A  + ++L
Subjt:  ARRVPEIL

A0A7N2L6Z9 Reverse transcriptase domain-containing protein2.2e-2856.48Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF +GW+ LI RC+S+V +S  ING   G++  +RGLRQGDPLSPYLFLLCAEGLS++  +A     ++G+ L R CP I+HLFFADDSLLF +A   E
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
          ++ EIL
Subjt:  ARRVPEIL

A0A803PVM0 Uncharacterized protein1.4e-2755.56Show/hide
Query:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE
        MGF Q WVDLI  C+++ +FSF +NG   G V+ +RGLRQGDPLSPYLFL+C+EGLS +  N E    + G++LTR  P+ISHL FADDSLLF  A +  
Subjt:  MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKERE

Query:  ARRVPEIL
        AR + ++L
Subjt:  ARRVPEIL

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein2.1e-0425.69Show/hide
Query:  GFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKEREA
        G +  ++++I    S    +  +NG +   +    G RQG PLSPYLF +  E L+           I G+++ ++   IS L  ADD ++++   +   
Subjt:  GFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKEREA

Query:  RRVPEILGS
        R +  ++ S
Subjt:  RRVPEILGS

P92555 Uncharacterized mitochondrial protein AtMg012503.8e-1453.62Show/hide
Query:  FNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDS
        F ING   G V  SRGLRQGDPLSPYLF+LC E LS +   A+   R+ G++++   P I+HL FADD+
Subjt:  FNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDS

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.8e-0430.77Show/hide
Query:  GFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLL
        G + G  D I   ++    +  + G     +    G++QGDPLSP LF +  + L +        D   G  +T  C  I+ L FADD LL
Subjt:  GFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLL

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.7e-1553.62Show/hide
Query:  FNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDS
        F ING   G V  SRGLRQGDPLSPYLF+LC E LS +   A+   R+ G++++   P I+HL FADD+
Subjt:  FNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTGAGCAGGGATGGGTCGATCTGATTGGGCGTTGTGTGTCCACGGTGCGGTTCTCTTTTAACATAAACGGGTTTAGATGTGGGGATGTGAAGCGTAGTCGGGG
CCTGCGGCAGGGGGACCCCTTATCCCCCTATCTTTTCTTATTATGTGCGGAGGGGTTGTCCAGTATGCCTTTGAATGCTGAGGCTACCGACAGGATTTCAGGAGTAAAGC
TGACTAGACAATGCCCGACAATATCCCACCTGTTTTTTGCAGACGACAGTTTGCTTTTCGTTAGGGCTAAGGAGAGAGAGGCTCGGAGAGTGCCGGAGATCCTGGGGAGC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTGAGCAGGGATGGGTCGATCTGATTGGGCGTTGTGTGTCCACGGTGCGGTTCTCTTTTAACATAAACGGGTTTAGATGTGGGGATGTGAAGCGTAGTCGGGG
CCTGCGGCAGGGGGACCCCTTATCCCCCTATCTTTTCTTATTATGTGCGGAGGGGTTGTCCAGTATGCCTTTGAATGCTGAGGCTACCGACAGGATTTCAGGAGTAAAGC
TGACTAGACAATGCCCGACAATATCCCACCTGTTTTTTGCAGACGACAGTTTGCTTTTCGTTAGGGCTAAGGAGAGAGAGGCTCGGAGAGTGCCGGAGATCCTGGGGAGC
TAA
Protein sequenceShow/hide protein sequence
MGFEQGWVDLIGRCVSTVRFSFNINGFRCGDVKRSRGLRQGDPLSPYLFLLCAEGLSSMPLNAEATDRISGVKLTRQCPTISHLFFADDSLLFVRAKEREARRVPEILGS