; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011008 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011008
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:12077999..12080421
RNA-Seq ExpressionLag0011008
SyntenyLag0011008
Gene Ontology termsNA
InterPro domainsIPR025724 - GAG-pre-integrase domain
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059756.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.1e-2952.48Show/hide
Query:  MTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTIEIKRDSRTVLTKEKINGLYV
        MTP+K WFT+YK W+  ++YMGN+   K+  I SV+LK KDG        RHVP+LK NLISLGMLD I C Y GS    EI +DS+ VL   KINGL+ 
Subjt:  MTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTIEIKRDSRTVLTKEKINGLYV

Query:  VKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK
        +K+V M    L+VS + LT+ DLWH R S IS KGL++L++
Subjt:  VKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK

TXG72438.1 hypothetical protein EZV62_001017 [Acer yangbiense]5.6e-2640.99Show/hide
Query:  VHNKADERYDWVIDSGCSFHMTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTI
        + ++ D   +WV+DSGC+FHMTP K  F +++  +   V MGN+  CKV  I SV LKL DG        R++P+LK NLISLG+LD     Y    G +
Subjt:  VHNKADERYDWVIDSGCSFHMTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTI

Query:  EIKRDSRTVLTKEKINGLYVVKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK
        ++ + S  V+  EK NGLY++  V ++ T  V +   L  + LWH+R +H+S KGL  L+K
Subjt:  EIKRDSRTVLTKEKINGLYVVKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK

XP_022140821.1 LRR receptor-like serine/threonine-protein kinase GSO2 [Momordica charantia]5.5e-2972.28Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQME-GMAPKTEIEEAKEGDGENYIDEWPKL
        MTN+ESLDFSRN+LSG+IP SM+ LTFL++LN S+NNLSG IP+STQLQ LDPSSFIGNELCGPPLTNSC+ E    P+T+  EAKE D E YIDEW  L
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQME-GMAPKTEIEEAKEGDGENYIDEWPKL

Query:  S
        S
Subjt:  S

XP_022159203.1 LRR receptor-like serine/threonine-protein kinase GSO2 [Momordica charantia]3.3e-2666Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS
        M ++ESLD SRN+LSG+IP SM+ LTFL+YLN +YNNL+G IPSSTQLQ LDPSSF+GNELCG PLTNSC+ EG   + +  +AKE D E+YID W  LS
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS

XP_038882430.1 receptor-like protein EIX1 [Benincasa hispida]4.5e-3173.27Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAK-EGDGENYIDEWPKL
        M ++ESLD SRN+L G+IPQSM++LTFLSYLN SYNNLSGQIPSSTQLQRLDPSSF+GN LCGPPL NSCQMEG  P  E  E K EGD  + IDEW  L
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAK-EGDGENYIDEWPKL

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A5A7UZX2 Retrovirus-related Pol polyprotein from transposon TNT 1-945.3e-3052.48Show/hide
Query:  MTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTIEIKRDSRTVLTKEKINGLYV
        MTP+K WFT+YK W+  ++YMGN+   K+  I SV+LK KDG        RHVP+LK NLISLGMLD I C Y GS    EI +DS+ VL   KINGL+ 
Subjt:  MTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTIEIKRDSRTVLTKEKINGLYV

Query:  VKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK
        +K+V M    L+VS + LT+ DLWH R S IS KGL++L++
Subjt:  VKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK

A0A5C7ITL9 CCHC-type domain-containing protein2.7e-2640.99Show/hide
Query:  VHNKADERYDWVIDSGCSFHMTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTI
        + ++ D   +WV+DSGC+FHMTP K  F +++  +   V MGN+  CKV  I SV LKL DG        R++P+LK NLISLG+LD     Y    G +
Subjt:  VHNKADERYDWVIDSGCSFHMTPMKGWFTSYKDWNGEIVYMGNNHTCKVNVIRSVSLKLKDG--------RHVPNLKSNLISLGMLDLIRCTYGGSGGTI

Query:  EIKRDSRTVLTKEKINGLYVVKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK
        ++ + S  V+  EK NGLY++  V ++ T  V +   L  + LWH+R +H+S KGL  L+K
Subjt:  EIKRDSRTVLTKEKINGLYVVKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK

A0A6J1CH67 LRR receptor-like serine/threonine-protein kinase GSO22.6e-2972.28Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQME-GMAPKTEIEEAKEGDGENYIDEWPKL
        MTN+ESLDFSRN+LSG+IP SM+ LTFL++LN S+NNLSG IP+STQLQ LDPSSFIGNELCGPPLTNSC+ E    P+T+  EAKE D E YIDEW  L
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQME-GMAPKTEIEEAKEGDGENYIDEWPKL

Query:  S
        S
Subjt:  S

A0A6J1DY64 LRR receptor-like serine/threonine-protein kinase GSO21.6e-2666Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS
        M ++ESLD SRN+LSG+IP SM+ LTFL+YLN +YNNL+G IPSSTQLQ LDPSSF+GNELCG PLTNSC+ EG   + +  +AKE D E+YID W  LS
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS

A0A6J1E701 LRR receptor-like serine/threonine-protein kinase ERECTA3.9e-2563Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS
        M ++ESLD SRN+L G+IP SM+ L+FLSYLN SYNNLSG IP+ TQLQR  P SFIGNELCG PL  SC MEG+ PK   E  KE +G + ID W  LS
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLS

SwissProt top hitse value%identityAlignment
F4JTU7 Receptor-like protein 481.2e-1544.55Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSC----QMEGMAPKTEIEEAKEGDGENYIDE
        ++N++SLD S+N+LSG IP  +  LTFL ++NFSYN L G IP +TQ+Q  + SSF  N  LCG P  N C    + E  A K E +E +E + +N +  
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSC----QMEGMAPKTEIEEAKEGDGENYIDE

Query:  W
        W
Subjt:  W

Q6JN46 Receptor-like protein EIX22.7e-1539.74Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKL
        M  +ESLD SRN+LSG IPQ +++LTFLS L+ S N+LSG+IPSSTQLQ  D SS+ GN +LCGPPL    +  G AP  +          +  DE+  L
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKL

Query:  SNHSTSVFDSSLLDHAFLWFGC-VINRLLGFLSSPSYSNGSYSFGSFSFAW
          + + V    +     L  GC ++NR        S+ N  ++F +   +W
Subjt:  SNHSTSVFDSSLLDHAFLWFGC-VINRLLGFLSSPSYSNGSYSFGSFSFAW

Q6JN47 Receptor-like protein EIX11.0e-1439.1Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEI------EEAKEGDGENYI
        M  +ESLD SRN+LSG IPQ + +LTFLS L+ S N LSG+IPSSTQLQ  D SS+  N +LCGPPL    +  G AP + +         +E D E   
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEI------EEAKEGDGENYI

Query:  DEWPKLSNHSTSVFDSSLLDHAFLWFGCVINRLLGFLSSPSYSNGSYSFGSFSFAW
        +E+P L  + + V    +     L  GC+I        + S+ N  + F + + +W
Subjt:  DEWPKLSNHSTSVFDSSLLDHAFLWFGCVINRLLGFLSSPSYSNGSYSFGSFSFAW

Q9SVM3 Receptor-like protein 493.6e-1550.57Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKE
        ++N++SLD S+N+LSG IP  +  LTFL+ +NFSYN L G IP +TQ+Q  D SSF  N  LCG PL  +C  +  A K E +E KE
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKE

Q9SVN2 Receptor-like protein 472.7e-1548.35Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE
        ++N++SLD S+N+LSG IP  +  LTFL ++NFS+N L G IP +TQ+Q  D SSF  N  LCG PL   C  E  A K E +E KE + +
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE

Arabidopsis top hitse value%identityAlignment
AT2G32680.1 receptor like protein 239.6e-1642.61Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPK-TEIEEAKEGDGENYIDEWPK
        + N+ESLD SRN+LSG IP  + S++FL+Y+N S+N L+G+IP  TQ+     SSF GN  LCG PL  SC   G  P   + +E KE + E   +E   
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPK-TEIEEAKEGDGENYIDEWPK

Query:  LSNHSTSV-FDSSLL
        L+  + ++ + S LL
Subjt:  LSNHSTSV-FDSSLL

AT4G13810.1 receptor like protein 471.9e-1648.35Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE
        ++N++SLD S+N+LSG IP  +  LTFL ++NFS+N L G IP +TQ+Q  D SSF  N  LCG PL   C  E  A K E +E KE + +
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE

AT4G13810.2 receptor like protein 471.9e-1648.35Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE
        ++N++SLD S+N+LSG IP  +  LTFL ++NFS+N L G IP +TQ+Q  D SSF  N  LCG PL   C  E  A K E +E KE + +
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSCQMEGMAPKTEIEEAKEGDGE

AT4G13880.1 receptor like protein 488.7e-1744.55Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSC----QMEGMAPKTEIEEAKEGDGENYIDE
        ++N++SLD S+N+LSG IP  +  LTFL ++NFSYN L G IP +TQ+Q  + SSF  N  LCG P  N C    + E  A K E +E +E + +N +  
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNE-LCGPPLTNSC----QMEGMAPKTEIEEAKEGDGENYIDE

Query:  W
        W
Subjt:  W

AT5G40170.1 receptor like protein 542.8e-1544.33Show/hide
Query:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEW
        +  +ESLD S+N++SG IPQ +  LTFL Y+N S+N L+GQIP STQ+     SSF GN  LCG PL  SC      P T   + +E   + +   W
Subjt:  MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGN-ELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGTGGAGTCTCTTGATTTTTCAAGGAACAAACTCTCGGGGAAAATACCACAAAGCATGACGAGTTTGACATTCTTGAGCTACTTGAACTTTTCTTATAATAA
CTTGTCAGGTCAGATTCCAAGCAGTACACAACTCCAACGCTTAGATCCATCTAGCTTCATTGGCAATGAGTTATGCGGACCTCCACTCACCAACAGTTGCCAAATGGAAG
GAATGGCACCAAAAACAGAAATTGAAGAAGCAAAGGAAGGTGATGGTGAAAATTATATTGATGAGTGGCCTAAGTTGTCGAACCACTCTACATCAGTGTTTGATTCTTCT
CTTCTTGATCATGCATTTCTCTGGTTTGGTTGTGTTATTAATCGTCTTCTTGGCTTCTTGTCGTCTCCTTCATATTCGAATGGTTCTTATTCTTTTGGTTCCTTTTCGTT
TGCATGGGGCCTAGGAAGTCGAGACCGCCTTGAAATATGGAAGAAAGTCAATTACAACCGAAGGGATAATCTCAGCTATGAAAGAAGTGTGCATAATAAGGCTGATGAGA
GGTATGATTGGGTGATAGACTCAGGGTGCTCCTTCCACATGACTCCCATGAAGGGTTGGTTCACTTCATATAAGGATTGGAATGGGGAAATTGTGTATATGGGCAACAAC
CATACCTGCAAGGTGAACGTCATTAGATCTGTTTCCTTAAAATTAAAGGATGGTCGACATGTGCCCAACCTCAAGAGCAATCTAATATCCTTAGGAATGTTAGATTTGAT
TCGCTGTACCTATGGAGGCAGTGGAGGCACCATTGAAATTAAACGAGATTCCAGAACAGTCCTCACTAAGGAGAAAATTAATGGCTTATATGTGGTGAAGGATGTGCAAA
TGGTGCAAACAACACTTGTGGTATCTGAAAATGCTTTAACAGACAGTGACCTATGGCACAAAAGGTTCTCCCATATTAGCTTAAAAGGACTCCAAGTTCTGGCAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGTGGAGTCTCTTGATTTTTCAAGGAACAAACTCTCGGGGAAAATACCACAAAGCATGACGAGTTTGACATTCTTGAGCTACTTGAACTTTTCTTATAATAA
CTTGTCAGGTCAGATTCCAAGCAGTACACAACTCCAACGCTTAGATCCATCTAGCTTCATTGGCAATGAGTTATGCGGACCTCCACTCACCAACAGTTGCCAAATGGAAG
GAATGGCACCAAAAACAGAAATTGAAGAAGCAAAGGAAGGTGATGGTGAAAATTATATTGATGAGTGGCCTAAGTTGTCGAACCACTCTACATCAGTGTTTGATTCTTCT
CTTCTTGATCATGCATTTCTCTGGTTTGGTTGTGTTATTAATCGTCTTCTTGGCTTCTTGTCGTCTCCTTCATATTCGAATGGTTCTTATTCTTTTGGTTCCTTTTCGTT
TGCATGGGGCCTAGGAAGTCGAGACCGCCTTGAAATATGGAAGAAAGTCAATTACAACCGAAGGGATAATCTCAGCTATGAAAGAAGTGTGCATAATAAGGCTGATGAGA
GGTATGATTGGGTGATAGACTCAGGGTGCTCCTTCCACATGACTCCCATGAAGGGTTGGTTCACTTCATATAAGGATTGGAATGGGGAAATTGTGTATATGGGCAACAAC
CATACCTGCAAGGTGAACGTCATTAGATCTGTTTCCTTAAAATTAAAGGATGGTCGACATGTGCCCAACCTCAAGAGCAATCTAATATCCTTAGGAATGTTAGATTTGAT
TCGCTGTACCTATGGAGGCAGTGGAGGCACCATTGAAATTAAACGAGATTCCAGAACAGTCCTCACTAAGGAGAAAATTAATGGCTTATATGTGGTGAAGGATGTGCAAA
TGGTGCAAACAACACTTGTGGTATCTGAAAATGCTTTAACAGACAGTGACCTATGGCACAAAAGGTTCTCCCATATTAGCTTAAAAGGACTCCAAGTTCTGGCAAAGTAG
Protein sequenceShow/hide protein sequence
MTNVESLDFSRNKLSGKIPQSMTSLTFLSYLNFSYNNLSGQIPSSTQLQRLDPSSFIGNELCGPPLTNSCQMEGMAPKTEIEEAKEGDGENYIDEWPKLSNHSTSVFDSS
LLDHAFLWFGCVINRLLGFLSSPSYSNGSYSFGSFSFAWGLGSRDRLEIWKKVNYNRRDNLSYERSVHNKADERYDWVIDSGCSFHMTPMKGWFTSYKDWNGEIVYMGNN
HTCKVNVIRSVSLKLKDGRHVPNLKSNLISLGMLDLIRCTYGGSGGTIEIKRDSRTVLTKEKINGLYVVKDVQMVQTTLVVSENALTDSDLWHKRFSHISLKGLQVLAK