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Lag0011032 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011032
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr1:12633250..12634639
RNA-Seq ExpressionLag0011032
SyntenyLag0011032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.3e-3266.97Show/hide
Query:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        ++E+D +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q STS+ASLS+Q  QDMI N IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQP
Subjt:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]4.9e-3266.06Show/hide
Query:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        ++E+D +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q STS+ASLS+Q  QDMI + IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQP
Subjt:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]4.9e-3266.06Show/hide
Query:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        ++E+D +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q STS+ASLS+Q  QDMI + IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQP
Subjt:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]4.9e-3266.06Show/hide
Query:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        ++E+D +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q STS+ASLS+Q  QDMI + IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQP
Subjt:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.3e-3266.97Show/hide
Query:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        ++E+D +I  LK Q++ +  AESSQT V+K  DKGK +VQ++QP Q STS+ASLS+Q  QDMI N IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQP
Subjt:  IEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

TrEMBL top hitse value%identityAlignment
A0A5A7TC87 Ty3-gypsy retrotransposon protein5.3e-3251.27Show/hide
Query:  NELRLQEDKASIIASKETNLQGA------YTNDKFLVKYNPLFEPDSDAIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSI
        N L      AS ++ KE++L+         T +  +V+           +EE+D +I  LK Q++    AESS+T V+K  DKGK +VQ++QP Q S S+
Subjt:  NELRLQEDKASIIASKETNLQGA------YTNDKFLVKYNPLFEPDSDAIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSI

Query:  ASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK
        ASLS+Q  QDMI N IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGK
Subjt:  ASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK

A0A5A7U5H1 Ty3-gypsy retrotransposon protein2.0e-3166.06Show/hide
Query:  AIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQPQGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP
        A+EEKD +I  LK  IE++  AESS T  IK  +KGK I+Q+ QPQ STSIASLS+Q  Q+MI N I+ QYGGP Q   LYSKPYTKRIDN+R P GYQP
Subjt:  AIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQPQGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQP

Query:  PKFQQFDGK
        PKFQQFDGK
Subjt:  PKFQQFDGK

A0A5A7UM99 Ty3-gypsy retrotransposon protein2.0e-3142.86Show/hide
Query:  QQTSSMVAVEIKSYMSSTAHCCFNELRLQEDKASIIASKETNLQGAYTNDKFLVKYNPLFEPDSDA--------------IEEKDSQIVQLKCQIENQHI
        ++ +S  +    SY+             ++++  ++  K           + +++ NPLF   + A              +  +D +I  LK QI+    
Subjt:  QQTSSMVAVEIKSYMSSTAHCCFNELRLQEDKASIIASKETNLQGAYTNDKFLVKYNPLFEPDSDA--------------IEEKDSQIVQLKCQIENQHI

Query:  AESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK
        AESSQT V+K  DKGK +VQ++QP Q S S+ASLS+Q  QDMI N IRAQYGGP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGK
Subjt:  AESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK

A0A5D3BYF7 Ty3-gypsy retrotransposon protein2.0e-3142.86Show/hide
Query:  QQTSSMVAVEIKSYMSSTAHCCFNELRLQEDKASIIASKETNLQGAYTNDKFLVKYNPLFEPDSDA--------------IEEKDSQIVQLKCQIENQHI
        ++ +S  +    SY+             ++++  ++  K           + +++ NPLF   + A              +  +D +I  LK QI+    
Subjt:  QQTSSMVAVEIKSYMSSTAHCCFNELRLQEDKASIIASKETNLQGAYTNDKFLVKYNPLFEPDSDA--------------IEEKDSQIVQLKCQIENQHI

Query:  AESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK
        AESSQT V+K  DKGK +VQ++QP Q S S+ASLS+Q  QDMI N IRAQYGGP Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGK
Subjt:  AESSQTQVIKKHDKGKTIVQDDQP-QGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK

A0A5D3DIN4 Ty3-gypsy retrotransposon protein5.3e-3251.27Show/hide
Query:  NELRLQEDKASIIASKETNLQGA------YTNDKFLVKYNPLFEPDSDAIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSI
        N L      AS ++ KE++L+         T +  +V+           +EE+D +I  LK Q++    AESS+T V+K  DKGK +VQ++QP Q S S+
Subjt:  NELRLQEDKASIIASKETNLQGA------YTNDKFLVKYNPLFEPDSDAIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQP-QGSTSI

Query:  ASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK
        ASLS+Q  QDMI N IRAQYGGP+Q S +YSKPYTKRIDNLR P+GYQPPKFQQFDGK
Subjt:  ASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQFDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGATCAAGAAGATCAATAAGTCAGCAGGCCGACCATCCAAGAAGAGATCAGCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGACCGATCATCCAA
GAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAACTTCTTCGATGGTTGCTGTCGAGATCAAGTCTTACATGAGTTCAACTGCCCATTGTTGCTTCAATG
AACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCAAAGAAACAAACTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAA
CCTGATTCTGACGCGATTGAAGAAAAAGATTCTCAAATCGTGCAACTAAAGTGCCAAATTGAGAACCAACATATCGCTGAATCAAGTCAAACCCAAGTCATAAAGAAGCA
TGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGGGTTCTACTTCAATCGCCTCACTATCCATCCAACACTTCCAAGATATGATCAAAAACTGTATCAGAGCTC
AGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATTGGGTATCAGCCACCAAAATTTCAGCAATTT
GATGGAAAAGCAATCCTAAGCAACATATTGCTCACTTCGTTGAGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGATCAAGAAGATCAATAAGTCAGCAGGCCGACCATCCAAGAAGAGATCAGCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGACCGATCATCCAA
GAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAACTTCTTCGATGGTTGCTGTCGAGATCAAGTCTTACATGAGTTCAACTGCCCATTGTTGCTTCAATG
AACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCAAAGAAACAAACTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAA
CCTGATTCTGACGCGATTGAAGAAAAAGATTCTCAAATCGTGCAACTAAAGTGCCAAATTGAGAACCAACATATCGCTGAATCAAGTCAAACCCAAGTCATAAAGAAGCA
TGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGGGTTCTACTTCAATCGCCTCACTATCCATCCAACACTTCCAAGATATGATCAAAAACTGTATCAGAGCTC
AGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATTGGGTATCAGCCACCAAAATTTCAGCAATTT
GATGGAAAAGCAATCCTAAGCAACATATTGCTCACTTCGTTGAGACTCTGA
Protein sequenceShow/hide protein sequence
MDRSRRSISQQADHPRRDQQANRPIKKINKSVDRSSKKRSTSQPTDQEDQQTSSMVAVEIKSYMSSTAHCCFNELRLQEDKASIIASKETNLQGAYTNDKFLVKYNPLFE
PDSDAIEEKDSQIVQLKCQIENQHIAESSQTQVIKKHDKGKTIVQDDQPQGSTSIASLSIQHFQDMIKNCIRAQYGGPTQDSLLYSKPYTKRIDNLRTPIGYQPPKFQQF
DGKAILSNILLTSLRL