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Lag0011037 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011037
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:12718756..12719717
RNA-Seq ExpressionLag0011037
SyntenyLag0011037
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3435535.1 hypothetical protein FNV43_RR22624 [Rhamnella rubrinervis]3.0e-0732.85Show/hide
Query:  GYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDRAEAKE
        G  D + L+ +++GL+  +LL  +G++ P+ + E + R Q+Y +A+ L+ S+++E+   G            K ++  DR  +  EH     +    AK 
Subjt:  GYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDRAEAKE

Query:  PRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
        PR    PKG+F  YT LTTS ++V   I D NLLK P
Subjt:  PRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]5.7e-1133.84Show/hide
Query:  KEEDNHHNSQRRTKNEDIEGLIGQMEPPFTDEIMG--------GDVPHKFN-----VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRY
        + E +     ++ K  D+E L+ Q + PFT+EIM          D   +FN     VEG  D V+L   I G++DE L  S G+  P T+ E ++RAQRY
Subjt:  KEEDNHHNSQRRTKNEDIEGLIGQMEPPFTDEIMG--------GDVPHKFN-----VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRY

Query:  ISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
        +SA +   SK+E    R    +DQ RE   D+ +G + E R RS  +                   +P  KF++YT  T  LE+VL  I++  LLK P
Subjt:  ISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.1e-0936.55Show/hide
Query:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG
        K  VEG  D V+L   +SG++DE L  S G+  P T+ E ++RAQRY+SA +   SK+E    R    +D  RE   D+ +G + E R RS         
Subjt:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG

Query:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
                   + +P  KF++YTP T  +E+VL  I+D  LLK P
Subjt:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]5.4e-0936.55Show/hide
Query:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG
        K  +E   D V+L   +SG++DE L  S G+  P T+ E ++RAQRY+SA +   SK+E    R    +DQ RE   D+ +G + E R RS         
Subjt:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG

Query:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
                   + +P  KF++YTP T  LE+VL  I+D  LLK P
Subjt:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]5.0e-0734.27Show/hide
Query:  VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQ----D
        V+GYDDGVAL+ ++ GLQ  RL  S+ ++ P TY E ++RA++Y +A++  +SK+   E   +S + + +EDR       D    R + +S   Q    D
Subjt:  VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQ----D

Query:  RAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
        +  ++EPR R  P  +F  YT L    E +L  ++++ L K P
Subjt:  RAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.8e-1133.84Show/hide
Query:  KEEDNHHNSQRRTKNEDIEGLIGQMEPPFTDEIMG--------GDVPHKFN-----VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRY
        + E +     ++ K  D+E L+ Q + PFT+EIM          D   +FN     VEG  D V+L   I G++DE L  S G+  P T+ E ++RAQRY
Subjt:  KEEDNHHNSQRRTKNEDIEGLIGQMEPPFTDEIMG--------GDVPHKFN-----VEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRY

Query:  ISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
        +SA +   SK+E    R    +DQ RE   D+ +G + E R RS  +                   +P  KF++YT  T  LE+VL  I++  LLK P
Subjt:  ISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

A0A6J1D911 uncharacterized protein LOC1110183651.7e-0538.28Show/hide
Query:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDR
        K  VEG  D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA +   SK+E  E R    +DQ RE  G     +   RSR E      +DR
Subjt:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDR

Query:  AEAKEPRGRAEPKGKFDRYTPLTTSLEE
        +  K      +P  KF++YTP T  LE+
Subjt:  AEAKEPRGRAEPKGKFDRYTPLTTSLEE

A0A6J1DWY0 uncharacterized protein LOC1110252932.0e-0936.55Show/hide
Query:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG
        K  VEG  D V+L   +SG++DE L  S G+  P T+ E ++RAQRY+SA +   SK+E    R    +D  RE   D+ +G + E R RS         
Subjt:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG

Query:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
                   + +P  KF++YTP T  +E+VL  I+D  LLK P
Subjt:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

A0A6J1DYL6 uncharacterized protein LOC1110257852.6e-0936.55Show/hide
Query:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG
        K  +E   D V+L   +SG++DE L  S G+  P T+ E ++RAQRY+SA +   SK+E    R    +DQ RE   D+ +G + E R RS         
Subjt:  KFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHRE---DRGKGRKVEDRGRSRHEHSSANG

Query:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP
                   + +P  KF++YTP T  LE+VL  I+D  LLK P
Subjt:  QDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP

A0A6J1DZ52 uncharacterized protein LOC1110256123.9e-0536.51Show/hide
Query:  ISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKF
        +SG++DE L  S G+  P T+ E ++RAQ+Y+SA++    K +E+E + A   DQ RE  G+          +   S    QDR       G+ +   KF
Subjt:  ISGLQDERLLNSIGESHPQTYVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKF

Query:  DRYTPLTTSLEEVLAAIQDTNLLKRP
        ++YTP T  LE+VL  I+D  LLK P
Subjt:  DRYTPLTTSLEEVLAAIQDTNLLKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACAAGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAGGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCGGGAGCTATCCAAATGGCTAAAGGAGGA
AGACAACCATCACAACTCCCAAAGAAGGACTAAGAATGAGGATATAGAAGGGCTGATTGGGCAGATGGAACCACCCTTCACTGACGAGATAATGGGAGGGGACGTGCCGC
ATAAGTTTAATGTAGAAGGCTATGACGACGGAGTTGCCTTGACTGATGTGATTTCAGGCCTGCAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCACCCACAAACA
TATGTGGAATTTATGACCCGAGCACAAAGGTACATAAGCGCCAAAAAATTGCTGAAATCCAAGCAAGAAGAGATAGAGAGTCGGGGAGCTTCTGTGTCTGACCAGCATCG
AGAAGACAGAGGGAAAGGGCGCAAGGTCGAGGATAGAGGCCGAAGTCGACATGAGCACTCCTCGGCCAATGGCCAAGATCGAGCAGAGGCCAAGGAGCCGCGGGGCCGTG
CAGAACCGAAAGGCAAATTCGACAGGTATACGCCGCTAACAACTTCACTTGAAGAGGTATTGGCCGCCATACAGGATACCAATCTATTGAAACGACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACACAAGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAGGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCGGGAGCTATCCAAATGGCTAAAGGAGGA
AGACAACCATCACAACTCCCAAAGAAGGACTAAGAATGAGGATATAGAAGGGCTGATTGGGCAGATGGAACCACCCTTCACTGACGAGATAATGGGAGGGGACGTGCCGC
ATAAGTTTAATGTAGAAGGCTATGACGACGGAGTTGCCTTGACTGATGTGATTTCAGGCCTGCAGGATGAAAGGTTGCTCAACTCGATCGGTGAGAGCCACCCACAAACA
TATGTGGAATTTATGACCCGAGCACAAAGGTACATAAGCGCCAAAAAATTGCTGAAATCCAAGCAAGAAGAGATAGAGAGTCGGGGAGCTTCTGTGTCTGACCAGCATCG
AGAAGACAGAGGGAAAGGGCGCAAGGTCGAGGATAGAGGCCGAAGTCGACATGAGCACTCCTCGGCCAATGGCCAAGATCGAGCAGAGGCCAAGGAGCCGCGGGGCCGTG
CAGAACCGAAAGGCAAATTCGACAGGTATACGCCGCTAACAACTTCACTTGAAGAGGTATTGGCCGCCATACAGGATACCAATCTATTGAAACGACCATAA
Protein sequenceShow/hide protein sequence
MYTRNNDRKKLEARARSEAEQGQKGRERELSKWLKEEDNHHNSQRRTKNEDIEGLIGQMEPPFTDEIMGGDVPHKFNVEGYDDGVALTDVISGLQDERLLNSIGESHPQT
YVEFMTRAQRYISAKKLLKSKQEEIESRGASVSDQHREDRGKGRKVEDRGRSRHEHSSANGQDRAEAKEPRGRAEPKGKFDRYTPLTTSLEEVLAAIQDTNLLKRP