; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011053 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011053
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase
Genome locationchr1:13369005..13374672
RNA-Seq ExpressionLag0011053
SyntenyLag0011053
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]5.5e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
KAA0039947.1 integrase [Cucumis melo var. makuwa]5.5e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
KAA0060377.1 integrase [Cucumis melo var. makuwa]5.5e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
TYJ95504.1 integrase [Cucumis melo var. makuwa]5.5e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
TYK30104.1 integrase [Cucumis melo var. makuwa]4.2e-7569.53Show/hide
Query:  FNRNGFEAYKISVDIMHLMILSEQLQRLGNQLEERPHQNSGGYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQ
        F+R  F  + I + +++        Q L + +E        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+
Subjt:  FNRNGFEAYKISVDIMHLMILSEQLQRLGNQLEERPHQNSGGYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQ

Query:  STYQGED-----------------KMKETETVEEFFNRILAIVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHEL
        STYQGED                 KMKETET+EEFFNRIL IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHEL
Subjt:  STYQGED-----------------KMKETETVEEFFNRILAIVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHEL

Query:  RLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        RLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  RLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
TrEMBL top hitse value%identityAlignment
A0A5A7UZJ8 Integrase2.7e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
A0A5D3BQ81 Integrase2.7e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
A0A5D3CLV1 Integrase2.7e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
A0A5D3E2J1 Integrase2.0e-7569.53Show/hide
Query:  FNRNGFEAYKISVDIMHLMILSEQLQRLGNQLEERPHQNSGGYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQ
        F+R  F  + I + +++        Q L + +E        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+
Subjt:  FNRNGFEAYKISVDIMHLMILSEQLQRLGNQLEERPHQNSGGYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQ

Query:  STYQGED-----------------KMKETETVEEFFNRILAIVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHEL
        STYQGED                 KMKETET+EEFFNRIL IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHEL
Subjt:  STYQGED-----------------KMKETETVEEFFNRILAIVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHEL

Query:  RLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        RLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  RLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
A0A5D3E3T2 Integrase2.7e-7580.73Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA
        GYT+VENQ+ELTNQQL ELRENRKKDKK LFFIYQ VDE +FERISTATS KAAWDIL+STYQGED                 KMKETET+EEFFNRIL 
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGED-----------------KMKETETVEEFFNRILA

Query:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
        IVNSLR+NGEE+GDQRVVEKILRSMPR FEHIVVAIEESKDL TLS+NSLMGSLQSHELRLKQFDVNPEE FQMQTSFRG SRGR GG GRR
Subjt:  IVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEESKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein1.3e-0546.15Show/hide
Query:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTK
        G+ + EN+  L+  Q   LR++RK+DKK L  IYQ +DE  FE++  ATS K
Subjt:  GYTDVENQNELTNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCAAATTCATAGCTTTGGACAAGGCAGGAGAAGAAGCTGAATGGTTACGTAATTTTTTGGAAGATATTCCTAATTGGACTAAACCTGTACCCCCCCCCCAATA
TGTATACACTGTGATAGTCAGATCCGCTTACGAAATCTTTGACAAGAGAGCAAGTGAACTTGTCTTCAATAGGAATGGATTTGAAGCATATAAAATAAGTGTGGACATAA
TGCATCTTATGATATTGTCGGAGCAGCTCCAAAGACTGGGAAATCAATTAGAAGAAAGACCCCATCAGAACTCAGGAGGATACACTGATGTTGAGAATCAGAACGAGCTC
ACTAATCAACAACTTGCCGAGTTGAGAGAAAATCGTAAGAAAGACAAGAAGACTTTATTCTTCATTTATCAAGTTGTTGATGAACATGTCTTCGAAAGAATTTCAACAGC
TACTTCTACAAAGGCAGCTTGGGATATTTTACAATCCACCTATCAAGGAGAAGATAAGATGAAAGAGACCGAAACTGTTGAAGAGTTTTTCAATCGTATTCTTGCGATTG
TCAACAGTTTGAGAACAAATGGAGAAGAATTGGGTGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAATTTTGAGCATATTGTCGTTGCAATTGAAGAA
TCAAAAGATTTATATACACTATCAGTAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTTAGATTGAAGCAATTTGATGTTAATCCCGAGGAAACATTTCAGATGCA
AACTTCATTCAGAGGTGATTCTCGTGGAAGATGTGGTGGTCGTGGCAGACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCAAATTCATAGCTTTGGACAAGGCAGGAGAAGAAGCTGAATGGTTACGTAATTTTTTGGAAGATATTCCTAATTGGACTAAACCTGTACCCCCCCCCCAATA
TGTATACACTGTGATAGTCAGATCCGCTTACGAAATCTTTGACAAGAGAGCAAGTGAACTTGTCTTCAATAGGAATGGATTTGAAGCATATAAAATAAGTGTGGACATAA
TGCATCTTATGATATTGTCGGAGCAGCTCCAAAGACTGGGAAATCAATTAGAAGAAAGACCCCATCAGAACTCAGGAGGATACACTGATGTTGAGAATCAGAACGAGCTC
ACTAATCAACAACTTGCCGAGTTGAGAGAAAATCGTAAGAAAGACAAGAAGACTTTATTCTTCATTTATCAAGTTGTTGATGAACATGTCTTCGAAAGAATTTCAACAGC
TACTTCTACAAAGGCAGCTTGGGATATTTTACAATCCACCTATCAAGGAGAAGATAAGATGAAAGAGACCGAAACTGTTGAAGAGTTTTTCAATCGTATTCTTGCGATTG
TCAACAGTTTGAGAACAAATGGAGAAGAATTGGGTGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAATTTTGAGCATATTGTCGTTGCAATTGAAGAA
TCAAAAGATTTATATACACTATCAGTAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTTAGATTGAAGCAATTTGATGTTAATCCCGAGGAAACATTTCAGATGCA
AACTTCATTCAGAGGTGATTCTCGTGGAAGATGTGGTGGTCGTGGCAGACGATGA
Protein sequenceShow/hide protein sequence
MESKFIALDKAGEEAEWLRNFLEDIPNWTKPVPPPQYVYTVIVRSAYEIFDKRASELVFNRNGFEAYKISVDIMHLMILSEQLQRLGNQLEERPHQNSGGYTDVENQNEL
TNQQLAELRENRKKDKKTLFFIYQVVDEHVFERISTATSTKAAWDILQSTYQGEDKMKETETVEEFFNRILAIVNSLRTNGEELGDQRVVEKILRSMPRNFEHIVVAIEE
SKDLYTLSVNSLMGSLQSHELRLKQFDVNPEETFQMQTSFRGDSRGRCGGRGRR