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Lag0011056 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011056
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnucleolar complex protein 2 homolog
Genome locationchr1:13395258..13395917
RNA-Seq ExpressionLag0011056
SyntenyLag0011056
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0030690 - Noc1p-Noc2p complex (cellular component)
GO:0030691 - Noc2p-Noc3p complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR005343 - Nucleolar complex protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016274.1 Nucleolar complex protein 2-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2359.8Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ
        F  QVEQNIDFVQKKR+EVSFSPKDQQ V+SFLQLEKCN+N PF QYYKS+LDK+ASR+++LDKK PG  K K+K    +       A  GK    ++  
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ

Query:  KQ
        K+
Subjt:  KQ
XP_016903037.1 PREDICTED: nucleolar complex protein 2 homolog [Cucumis melo]1.3e-2362.14Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ
        F  QVEQNIDF++KKRDEVSFSP DQQ  +SFLQLEKCN+NVPFIQYYKSILDK+ASR+LA+DKKF G  K K+K    +  +    A  GK    R E+
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ

Query:  KQG
        ++G
Subjt:  KQG
XP_022133964.1 nucleolar complex protein 2 homolog isoform X1 [Momordica charantia]3.1e-2574.7Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
        F  QVEQNIDFVQKKRDEVSFSPKDQQ ++SFLQLEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG  K K+K    K  +
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
XP_022133965.1 nucleolar complex protein 2 homolog isoform X2 [Momordica charantia]3.1e-2574.7Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
        F  QVEQNIDFVQKKRDEVSFSPKDQQ ++SFLQLEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG  K K+K    K  +
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
XP_038890958.1 nucleolar complex protein 2 homolog [Benincasa hispida]9.9e-2480Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRK
        F  QVEQNIDFVQKKRDEVSFSPKDQQ  +SFLQLEK N+NVPFIQYYKSILDK+ASR++A+DKKFPG  K K+K
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRK
TrEMBL top hitse value%identityAlignment
A0A1S4E491 nucleolar complex protein 2 homolog6.2e-2462.14Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ
        F  QVEQNIDF++KKRDEVSFSP DQQ  +SFLQLEKCN+NVPFIQYYKSILDK+ASR+LA+DKKF G  K K+K    +  +    A  GK    R E+
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ

Query:  KQG
        ++G
Subjt:  KQG
A0A6J1BWQ1 nucleolar complex protein 2 homolog isoform X21.5e-2574.7Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
        F  QVEQNIDFVQKKRDEVSFSPKDQQ ++SFLQLEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG  K K+K    K  +
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
A0A6J1BXF8 nucleolar complex protein 2 homolog isoform X11.5e-2574.7Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
        F  QVEQNIDFVQKKRDEVSFSPKDQQ ++SFLQLEKCN+NVPFIQYYKSI+DK+ SRNL LDKKFPG  K K+K    K  +
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTR
A0A6J1FEG8 nucleolar complex protein 2 homolog isoform X11.1e-2359.8Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ
        F  QVEQNIDFVQKKR+EVSFSPKDQQ V+SFLQLEKCN+N PF QYYKS+LDK+ASR+++LDKK PG  K K+K    +       A  GK    ++  
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ

Query:  KQ
        K+
Subjt:  KQ
A0A6J1FFE6 nucleolar complex protein 2 homolog isoform X21.1e-2359.8Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ
        F  QVEQNIDFVQKKR+EVSFSPKDQQ V+SFLQLEKCN+N PF QYYKS+LDK+ASR+++LDKK PG  K K+K    +       A  GK    ++  
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQRREEQ

Query:  KQ
        K+
Subjt:  KQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18220.1 Noc2p family5.4e-0438.98Show/hide
Query:  QVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLAL
        Q+E N +FV KKR  + F P D    +SFL+ EK     P +QY + I  ++  RN +L
Subjt:  QVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLAL
AT3G55510.1 Noc2p family5.2e-1561.02Show/hide
Query:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRN
        F  QVE NI+FVQ+KRD+V+FSP DQQ  D+F+QLEK N N P+ QYY+SI+DK+   N
Subjt:  FALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTACATGTTCTTAGACCTTTTGTTTGCCCTTCAGGTTGAGCAGAATATTGACTTCGTGCAAAAAAAGAGGGATGAAGTCTCATTTTCACCCAAAGATCAG
CAAGTTGTTGATTCATTTCTTCAGCTAGAGAAATGCAACAACAACGTTCCGTTTATACAATATTACAAAAGCATATTGGACAAATCTGCATCCAGGAATCTGGCT
CTAGATAAAAAGTTTCCTGGACCAACAAAAACAAAAAGAAAAGACAGCAGCTCGAAAACGACCAGATCAAATCGGTTGGCACTAATGGGAAAGTACATTCAGAGA
AGAGAAGAGCAAAAACAAGGAAACCTTGAGGACGCATTTGCCGTTGTGTTTATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTACATGTTCTTAGACCTTTTGTTTGCCCTTCAGGTTGAGCAGAATATTGACTTCGTGCAAAAAAAGAGGGATGAAGTCTCATTTTCACCCAAAGATCAG
CAAGTTGTTGATTCATTTCTTCAGCTAGAGAAATGCAACAACAACGTTCCGTTTATACAATATTACAAAAGCATATTGGACAAATCTGCATCCAGGAATCTGGCT
CTAGATAAAAAGTTTCCTGGACCAACAAAAACAAAAAGAAAAGACAGCAGCTCGAAAACGACCAGATCAAATCGGTTGGCACTAATGGGAAAGTACATTCAGAGA
AGAGAAGAGCAAAAACAAGGAAACCTTGAGGACGCATTTGCCGTTGTGTTTATTTTCTGA
Protein sequenceShow/hide protein sequence
MRYMFLDLLFALQVEQNIDFVQKKRDEVSFSPKDQQVVDSFLQLEKCNNNVPFIQYYKSILDKSASRNLALDKKFPGPTKTKRKDSSSKTTRSNRLALMGKYIQR
REEQKQGNLEDAFAVVFIF