; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011059 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011059
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:13438409..13440778
RNA-Seq ExpressionLag0011059
SyntenyLag0011059
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0639.36Show/hide
Query:  KLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
        KLN  AS    +  GGV W++HDSLGS IC+  K+++  W VK LE KA+ EG+K   L++        P I +E     +  +LN   +DL E
Subjt:  KLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]2.6e-0940.2Show/hide
Query:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVD
        W  PP N WKLN DAS      +GG+GWIL D  G  +  G  KI+E   +  LE+  I  G++ I +            I +ESD+  VI L+ KE VD
Subjt:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVD

Query:  LT
        LT
Subjt:  LT
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]4.9e-0830Show/hide
Query:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG--WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYK
        MRN+   K ++ +   I   I+ Y  +S   + + + ++  + L   + +  + G  W PP +N WKLN +A+ +  +  GG+GWIL D  G  I    +
Subjt:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG--WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYK

Query:  KIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
         I+ + ++ +LE+ AI EG      L+A       P I +ESD+   I LL+++  D TE
Subjt:  KIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.7e-0631.58Show/hide
Query:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK
        MRN+   K ++S+   I   I+ Y  +S  +D + + ++     P  +   + R  W PP +N WKLN DA+ +  +   G+GWIL D  G  I  G + 
Subjt:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK

Query:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
        I+ + ++ +LE+ AI EG      L+A       P I +ESD+   I LL++
Subjt:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.8e-1136.72Show/hide
Query:  DRSYQLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNL
        + SYQ + +L  L   K+L +   W PPP ++W LN DAS   S+  GG+GWI+    G  +  G + ++   +VK LE  AI EG++ +  L    P  
Subjt:  DRSYQLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNL

Query:  AIPHIMVESDNAGVISLLNKEAVDLTET
            + +E+D+A V SLLN++  DLT+T
Subjt:  AIPHIMVESDNAGVISLLNKEAVDLTET
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.4e-0830Show/hide
Query:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG--WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYK
        MRN+   K ++ +   I   I+ Y  +S   + + + ++  + L   + +  + G  W PP +N WKLN +A+ +  +  GG+GWIL D  G  I    +
Subjt:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG--WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYK

Query:  KIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
         I+ + ++ +LE+ AI EG      L+A       P I +ESD+   I LL+++  D TE
Subjt:  KIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTE
A0A6J1CQG0 uncharacterized protein LOC1110132161.2e-0940.2Show/hide
Query:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVD
        W  PP N WKLN DAS      +GG+GWIL D  G  +  G  KI+E   +  LE+  I  G++ I +            I +ESD+  VI L+ KE VD
Subjt:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVD

Query:  LT
        LT
Subjt:  LT
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.3e-0631.58Show/hide
Query:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK
        MRN+   K ++S+   I   I+ Y  +S  +D + + ++     P  +   + R  W PP +N WKLN DA+ +  +   G+GWIL D  G  I  G + 
Subjt:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK

Query:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
        I+ + ++ +LE+ AI EG      L+A       P I +ESD+   I LL++
Subjt:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
A0A6J1DNV9 uncharacterized protein LOC1110224031.3e-1136.72Show/hide
Query:  DRSYQLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNL
        + SYQ + +L  L   K+L +   W PPP ++W LN DAS   S+  GG+GWI+    G  +  G + ++   +VK LE  AI EG++ +  L    P  
Subjt:  DRSYQLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNL

Query:  AIPHIMVESDNAGVISLLNKEAVDLTET
            + +E+D+A V SLLN++  DLT+T
Subjt:  AIPHIMVESDNAGVISLLNKEAVDLTET
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.3e-0631.58Show/hide
Query:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK
        MRN+   K ++S+   I   I+ Y  +S  +D + + ++     P  +   + R  W PP +N WKLN DA+ +  +   G+GWIL D  G  I  G + 
Subjt:  MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRG-WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKK

Query:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
        I+ + ++ +LE+ AI EG      L+A       P I +ESD+   I LL++
Subjt:  IKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-0524.84Show/hide
Query:  RNEIHQKNINSDNNQILK----NIEIYAPSSELEDRSY--QLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICV
        RNE+  K    D  ++L+    + E ++   ELE ++   Q++ NL              W  PP    K N DA+ Q+ +P  G+GWIL +  G  + +
Subjt:  RNEIHQKNINSDNNQILK----NIEIYAPSSELEDRSY--QLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICV

Query:  GYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKE
        G + +    +V   E++A++  +  +              I+ ESD   +++LLN +
Subjt:  GYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKE
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-0427Show/hide
Query:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPH--IMVESDNAGVISLLNKEA
        W PP  +  K N DAS    + + G+GWIL +S G+ I  G  K +          +   E  +C  L+ A   +    H  ++ E DN  +  ++N ++
Subjt:  WFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLEIKAIQEGIKCIPLLKAFYPNLAIPH--IMVESDNAGVISLLNKEA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAATGAAATCCACCAGAAGAATATCAATTCAGACAACAATCAAATTCTCAAAAATATAGAGATTTATGCTCCTAGTTCGGAGTTAGAGGATCGCTCTTACCAATT
GCAGGCGAATTTGCAGCAGCTTCCGTGCCCGAAGAGCCTCGTGAGTCATAGAGGTTGGTTTCCGCCGCCGGCAAATGTCTGGAAGCTCAACGTTGATGCTTCAAAACAGA
TTTCCTCGCCTCTTGGAGGAGTCGGCTGGATTCTCCATGACTCATTAGGATCTCCGATTTGCGTGGGGTATAAGAAGATCAAAGAAGATTGGTCAGTGAAATGGTTAGAA
ATTAAAGCGATTCAGGAGGGAATCAAATGTATACCTCTTCTGAAAGCCTTCTATCCGAATTTAGCCATCCCTCATATTATGGTTGAATCGGATAATGCTGGTGTGATAAG
TCTCCTCAACAAAGAAGCCGTCGACCTCACGGAAACCGCCTTGAGACGATCCAGCTTAAGGAAGAAGTTGGCTTCTTTAGTTTCGAGTTTTGTCGAAGATCTTGTAATGG
CGCTGCCCACAGTTTGGCGCGAATCGCAACTTTCCCTCACTCTGATAGTTACCTTTCTGGTTTTGGTTCTTCTTCTACTTCAGAAGAAGACTATGTGTTTTGGATTGGGC
CCCCTCCTCTTTGGGCCCAAGGAATCCTCAAAGGCGTTATGGGAGAACCACGCGAGTCAAGATCCTTGGAAGACGCCAGCAAAGGAACACCTAAAGCTTAATACTGATGC
ATCTTGGAATGAAAAGTTGAGTAGAGGGGGGCTGGGGTGGTCCATCCGTGGTTGTTTGAAATCTTACACGAACGAAATCAATGTCGATGGAAGCAGATTCAAGCCACCTC
TGGTTGTTGAATCAGACTCGCTCGAAGTCATCGGGGCTCTAAACGACGAGAGTGAAGATTTCTCAGAATTATCACTTGTCCTCGCCGATGTAGAAGAGTTGATCTTGCGG
ACAAATCAGGCTAGCGTCGAGACGCTAGATCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTGTGATAGGAAGCG
TCTCGACGCTTTCGTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGGTGTCTTGACAGCGTCTCGACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAATGAAATCCACCAGAAGAATATCAATTCAGACAACAATCAAATTCTCAAAAATATAGAGATTTATGCTCCTAGTTCGGAGTTAGAGGATCGCTCTTACCAATT
GCAGGCGAATTTGCAGCAGCTTCCGTGCCCGAAGAGCCTCGTGAGTCATAGAGGTTGGTTTCCGCCGCCGGCAAATGTCTGGAAGCTCAACGTTGATGCTTCAAAACAGA
TTTCCTCGCCTCTTGGAGGAGTCGGCTGGATTCTCCATGACTCATTAGGATCTCCGATTTGCGTGGGGTATAAGAAGATCAAAGAAGATTGGTCAGTGAAATGGTTAGAA
ATTAAAGCGATTCAGGAGGGAATCAAATGTATACCTCTTCTGAAAGCCTTCTATCCGAATTTAGCCATCCCTCATATTATGGTTGAATCGGATAATGCTGGTGTGATAAG
TCTCCTCAACAAAGAAGCCGTCGACCTCACGGAAACCGCCTTGAGACGATCCAGCTTAAGGAAGAAGTTGGCTTCTTTAGTTTCGAGTTTTGTCGAAGATCTTGTAATGG
CGCTGCCCACAGTTTGGCGCGAATCGCAACTTTCCCTCACTCTGATAGTTACCTTTCTGGTTTTGGTTCTTCTTCTACTTCAGAAGAAGACTATGTGTTTTGGATTGGGC
CCCCTCCTCTTTGGGCCCAAGGAATCCTCAAAGGCGTTATGGGAGAACCACGCGAGTCAAGATCCTTGGAAGACGCCAGCAAAGGAACACCTAAAGCTTAATACTGATGC
ATCTTGGAATGAAAAGTTGAGTAGAGGGGGGCTGGGGTGGTCCATCCGTGGTTGTTTGAAATCTTACACGAACGAAATCAATGTCGATGGAAGCAGATTCAAGCCACCTC
TGGTTGTTGAATCAGACTCGCTCGAAGTCATCGGGGCTCTAAACGACGAGAGTGAAGATTTCTCAGAATTATCACTTGTCCTCGCCGATGTAGAAGAGTTGATCTTGCGG
ACAAATCAGGCTAGCGTCGAGACGCTAGATCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTGTGATAGGAAGCG
TCTCGACGCTTTCGTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGGTGTCTTGACAGCGTCTCGACGCTAA
Protein sequenceShow/hide protein sequence
MRNEIHQKNINSDNNQILKNIEIYAPSSELEDRSYQLQANLQQLPCPKSLVSHRGWFPPPANVWKLNVDASKQISSPLGGVGWILHDSLGSPICVGYKKIKEDWSVKWLE
IKAIQEGIKCIPLLKAFYPNLAIPHIMVESDNAGVISLLNKEAVDLTETALRRSSLRKKLASLVSSFVEDLVMALPTVWRESQLSLTLIVTFLVLVLLLLQKKTMCFGLG
PLLFGPKESSKALWENHASQDPWKTPAKEHLKLNTDASWNEKLSRGGLGWSIRGCLKSYTNEINVDGSRFKPPLVVESDSLEVIGALNDESEDFSELSLVLADVEELILR
TNQASVETLDLERLDAHIPYQIRRVKLTASRRCDRKRLDAFVFPYSERAYKRQRRDGVLTASRR