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Lag0011071 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011071
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr1:13726667..13727005
RNA-Seq ExpressionLag0011071
SyntenyLag0011071
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046206.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-0845.05Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL
        MV+SM+S+AQL  SFWG A+ TAI                       G PK ++  +F++LQENK FVSTNA F KED +RNH+ +SK+ L
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL

KAA0049866.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-0947.25Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTA----------------------IGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SY QL  SFWG AV TA                      +G PK     +FF+ QENK FVSTNA F KED MR+HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTA----------------------IGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]5.3e-0842.39Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SYA L  SFWG AV TA+                       G PKG     F++ ++NK FVSTNA F +ED +R HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-0848.68Show/hide
Query:  MVQSMLSYAQLSGSFWG--------RAVLTAIGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL
        MV+SM+SYAQL  SFWG          +   +G PK     +FF+ QEN+ FVSTN  F +ED+MR+HKP+SK+ L
Subjt:  MVQSMLSYAQLSGSFWG--------RAVLTAIGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL

TYJ99758.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-0847.19Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI--------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SYAQL  SFWG AV TA+                    G  +G    IFF+ QEN+ FVSTNA F +ED+MR+HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI--------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

TrEMBL top hitse value%identityAlignment
A0A5A7V6N0 Gag/pol protein2.5e-0842.39Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SYA L  SFWG AV TA+                       G PKG     F++ ++NK FVSTNA F +ED +R HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

A0A5A7VJG3 Gag/pol protein1.1e-0848.68Show/hide
Query:  MVQSMLSYAQLSGSFWG--------RAVLTAIGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL
        MV+SM+SYAQL  SFWG          +   +G PK     +FF+ QEN+ FVSTN  F +ED+MR+HKP+SK+ L
Subjt:  MVQSMLSYAQLSGSFWG--------RAVLTAIGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL

A0A5D3BNP0 Gag/pol protein1.5e-0847.19Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI--------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SYAQL  SFWG AV TA+                    G  +G    IFF+ QEN+ FVSTNA F +ED+MR+HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI--------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

A0A5D3CS08 Gag/pol protein8.7e-0945.05Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL
        MV+SM+S+AQL  SFWG A+ TAI                       G PK ++  +F++LQENK FVSTNA F KED +RNH+ +SK+ L
Subjt:  MVQSMLSYAQLSGSFWGRAVLTAI-----------------------GNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGL

A0A5D3DC34 Gag/pol protein1.3e-0947.25Show/hide
Query:  MVQSMLSYAQLSGSFWGRAVLTA----------------------IGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS
        MV+SM+SY QL  SFWG AV TA                      +G PK     +FF+ QENK FVSTNA F KED MR+HKP+SK+ L+
Subjt:  MVQSMLSYAQLSGSFWGRAVLTA----------------------IGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAATCCATGTTGAGTTATGCTCAATTGTCTGGCTCGTTTTGGGGTCGTGCAGTATTGACTGCAATAGGCAACCCCAAAGGAAACGAGAATTGGATCTTCTTCAA
TCTACAAGAGAATAAAGAATTTGTATCCACAAATGCTAAATTCTCAAAAGAAGACCAAATGAGAAATCATAAGCCACAAAGTAAGGTTGGTTTAAGTGGAAAGCTAATGA
AGCTACAGGAACATCCACAAGAGTTGTCGATGAGGCTGGCTGTTCATCAAGAGTTGTTGATGGACAAGTATATCTGGTCAATTAAATCTATCTCAGTAGTTGAGATTGCC
TTAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAATCCATGTTGAGTTATGCTCAATTGTCTGGCTCGTTTTGGGGTCGTGCAGTATTGACTGCAATAGGCAACCCCAAAGGAAACGAGAATTGGATCTTCTTCAA
TCTACAAGAGAATAAAGAATTTGTATCCACAAATGCTAAATTCTCAAAAGAAGACCAAATGAGAAATCATAAGCCACAAAGTAAGGTTGGTTTAAGTGGAAAGCTAATGA
AGCTACAGGAACATCCACAAGAGTTGTCGATGAGGCTGGCTGTTCATCAAGAGTTGTTGATGGACAAGTATATCTGGTCAATTAAATCTATCTCAGTAGTTGAGATTGCC
TTAATGTAG
Protein sequenceShow/hide protein sequence
MVQSMLSYAQLSGSFWGRAVLTAIGNPKGNENWIFFNLQENKEFVSTNAKFSKEDQMRNHKPQSKVGLSGKLMKLQEHPQELSMRLAVHQELLMDKYIWSIKSISVVEIA
LM