; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011076 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011076
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol protein
Genome locationchr1:13826031..13828524
RNA-Seq ExpressionLag0011076
SyntenyLag0011076
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046290.1 pol protein [Cucumis melo var. makuwa]2.9e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LALS ++ TVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

KAA0053259.1 pol protein [Cucumis melo var. makuwa]7.5e-1251.06Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIRQKKLPGDK
        + L R G + Y L L  ++LTVHD FHVSMLR++V DPSHV++ EPL   E+L Y E+ V+VL  E K+LR++ I LV+VL+R +R  KL   K
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIRQKKLPGDK

KAA0062524.1 pol protein [Cucumis melo var. makuwa]2.9e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LALS ++ TVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

KAA0066676.1 pol protein [Cucumis melo var. makuwa]2.2e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LAL  ++LTVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

XP_022155349.1 uncharacterized protein LOC111022491 [Momordica charantia]2.6e-1253.85Show/hide
Query:  RSGVQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLAR
        R  + YWLA   T + VH+ FHVSMLR++V+DPSHVL+PEPL   E L Y E  +++L  E KVLR++T+ LV+VL R
Subjt:  RSGVQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLAR

TrEMBL top hitse value%identityAlignment
A0A5A7TT19 Pol protein1.4e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LALS ++ TVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

A0A5A7UIF4 Reverse transcriptase3.6e-1251.06Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIRQKKLPGDK
        + L R G + Y L L  ++LTVHD FHVSMLR++V DPSHV++ EPL   E+L Y E+ V+VL  E K+LR++ I LV+VL+R +R  KL   K
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIRQKKLPGDK

A0A5A7V5K5 Pol protein1.4e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LALS ++ TVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

A0A5A7VJY3 Pol protein1.1e-1155.81Show/hide
Query:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR
        + L R G V Y LAL  ++LTVHD FHVSMLR++V DPSHV++ EPL   E+L Y+E+ V+VL  E K LR+K I LV+VL R  R
Subjt:  QALPRSG-VQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIR

A0A6J1DQ06 uncharacterized protein LOC1110224911.3e-1253.85Show/hide
Query:  RSGVQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLAR
        R  + YWLA   T + VH+ FHVSMLR++V+DPSHVL+PEPL   E L Y E  +++L  E KVLR++T+ LV+VL R
Subjt:  RSGVQYWLALSLTMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAATAGTAGTCAAGGAAGTGGACGTTCTGGCCTTCCAGACGTTCCTGAGGTCAATTCACATCCCGAGACGAATCCTCATGTTCCTCCCCTAGCACCTTTTGT
GCTGACAGCAGAGGCATTGCAAGCTATGCTTGGCAATGCAATTCATAACAACTTGCAGCACGTCGGTGCGAATGAGGCCCTTGCTCGTGGCCAAGCCTCCTTCGTTCGAT
GGTTCGAGGAGTTTTCTTGTCGTGTCCCTGCATTGGTCGTCACCGAGGCAAGCAGGATCAACCGGTTCATTAATGACCTCGTGCGAAAATCAGAGGGTTGGTCACACTTG
GTCGACCAGCCACATTCGCAGCAGCTCTTGCGAGCGCATGGATGCTACATGATGACATCCCTAGGATGGAGCAGTCCCAGGAAGTGGGCACATCGTCTGTTCACCAATGA
AGAGCTCAAGGCGGAGTATCCAGAGCTTTATGATGAAGACAATTCTGTTGATGAAGATAGCTCTAAAGGTGGGGAGTCAGCGCACCCCTCGCTCAAGGAAAGTTCTGTAT
CCAGTCTCTCTAGTCGAAGGTCAAGGAGTAGGTTTCCAAGGATGCCTAAGAATCCAAGTTTGAACCTTGCAAGCTTCTGTTATGTCTTCGACTCATGGATAGCCTTGTCG
CTGCTTGGATTTCATGAATCAAGTGTCGAGGTTTTTGGACTTGCTCATGATGATGCTCTTAATGGTGTTGGTTTCTCTAACCGAGAGTCAGAGCATTTTCCTCACGTAGG
GAGACCTCAATCCAAGCAAAGCTATAAGGAAGTGCCAATGGTGGCGTTAGTGTCGTCTCATAGCCATTCTAGGAATGATGAGGAAAGTAGCTTGATGAGCAAAAAGTCTA
TGGCGTTAAGTGCCTTGTGGAGTATGAACCGGAGTCAAGGCCAATTGCCTAGTGTAGTTAGGCAAGCACTTCCGAGATCTGGAGTTCAGTATTGGTTGGCATTATCACTG
ACCATGTTGACTGTGCATGATGGATTCCACGTATCCATGTTGAGGAGATTCGTCTATGATCCTTCGCATGTGCTGAATCCTGAACCCCTGTCGTCGATCGAGGACTTGAT
GTATGTGGAGAAGTCTGTCAAGGTTCTAGTCGAGGAAGCAAAGGTTCTGAGAAGCAAGACCATCGTTTTGGTGGAGGTGCTTGCAAGAACCATAAGGCAGAAGAAGCTAC
CCGGAGATAAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAATAGTAGTCAAGGAAGTGGACGTTCTGGCCTTCCAGACGTTCCTGAGGTCAATTCACATCCCGAGACGAATCCTCATGTTCCTCCCCTAGCACCTTTTGT
GCTGACAGCAGAGGCATTGCAAGCTATGCTTGGCAATGCAATTCATAACAACTTGCAGCACGTCGGTGCGAATGAGGCCCTTGCTCGTGGCCAAGCCTCCTTCGTTCGAT
GGTTCGAGGAGTTTTCTTGTCGTGTCCCTGCATTGGTCGTCACCGAGGCAAGCAGGATCAACCGGTTCATTAATGACCTCGTGCGAAAATCAGAGGGTTGGTCACACTTG
GTCGACCAGCCACATTCGCAGCAGCTCTTGCGAGCGCATGGATGCTACATGATGACATCCCTAGGATGGAGCAGTCCCAGGAAGTGGGCACATCGTCTGTTCACCAATGA
AGAGCTCAAGGCGGAGTATCCAGAGCTTTATGATGAAGACAATTCTGTTGATGAAGATAGCTCTAAAGGTGGGGAGTCAGCGCACCCCTCGCTCAAGGAAAGTTCTGTAT
CCAGTCTCTCTAGTCGAAGGTCAAGGAGTAGGTTTCCAAGGATGCCTAAGAATCCAAGTTTGAACCTTGCAAGCTTCTGTTATGTCTTCGACTCATGGATAGCCTTGTCG
CTGCTTGGATTTCATGAATCAAGTGTCGAGGTTTTTGGACTTGCTCATGATGATGCTCTTAATGGTGTTGGTTTCTCTAACCGAGAGTCAGAGCATTTTCCTCACGTAGG
GAGACCTCAATCCAAGCAAAGCTATAAGGAAGTGCCAATGGTGGCGTTAGTGTCGTCTCATAGCCATTCTAGGAATGATGAGGAAAGTAGCTTGATGAGCAAAAAGTCTA
TGGCGTTAAGTGCCTTGTGGAGTATGAACCGGAGTCAAGGCCAATTGCCTAGTGTAGTTAGGCAAGCACTTCCGAGATCTGGAGTTCAGTATTGGTTGGCATTATCACTG
ACCATGTTGACTGTGCATGATGGATTCCACGTATCCATGTTGAGGAGATTCGTCTATGATCCTTCGCATGTGCTGAATCCTGAACCCCTGTCGTCGATCGAGGACTTGAT
GTATGTGGAGAAGTCTGTCAAGGTTCTAGTCGAGGAAGCAAAGGTTCTGAGAAGCAAGACCATCGTTTTGGTGGAGGTGCTTGCAAGAACCATAAGGCAGAAGAAGCTAC
CCGGAGATAAAGGGTGA
Protein sequenceShow/hide protein sequence
MSSNSSQGSGRSGLPDVPEVNSHPETNPHVPPLAPFVLTAEALQAMLGNAIHNNLQHVGANEALARGQASFVRWFEEFSCRVPALVVTEASRINRFINDLVRKSEGWSHL
VDQPHSQQLLRAHGCYMMTSLGWSSPRKWAHRLFTNEELKAEYPELYDEDNSVDEDSSKGGESAHPSLKESSVSSLSSRRSRSRFPRMPKNPSLNLASFCYVFDSWIALS
LLGFHESSVEVFGLAHDDALNGVGFSNRESEHFPHVGRPQSKQSYKEVPMVALVSSHSHSRNDEESSLMSKKSMALSALWSMNRSQGQLPSVVRQALPRSGVQYWLALSL
TMLTVHDGFHVSMLRRFVYDPSHVLNPEPLSSIEDLMYVEKSVKVLVEEAKVLRSKTIVLVEVLARTIRQKKLPGDKG