CuGenDBv2

Gene ID	Lag0011090
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr1:14110591..14111619
RNA-Seq Expression	Lag0011090
Synteny	Lag0011090
Gene Ontology terms	GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

3.5e-79

45.1

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF++PK L +E N +MARFWW + +  + +HW  W  +C  K +GGLGFRDLE FNQALLAKQ WR++  P+SLV R+ + RY     F+EA  G + 
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        SF+W+SL WG++LL +GLRWRVG G SI +  D+WL      K++    +    RV  L      WNV L+++IF +++V AIL+IP       D LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK
        YE NG++SV+SGY+LA   ++ +      R+    K+W  +WA K+P+KIKFF WR  + +LP    L  R +  +  CP+C RK E+V HA+W C + K
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK

Query:  QHWRES
        + WR S
Subjt:  QHWRES

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]

3.3e-77

44.41

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCFQ+PK L +E N +MARFWW + +  + +HW  W  +C  K +GGLGFRDLE FNQALLAKQ WR++  P+SLV R+ + RY     F+EA  G + 
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        SF+W SL WG++LL +G+RWRVG G SI +  D+WL      K++    +    RV  L      WNV L+++IF +++V AIL+IP       D LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK
        YE NG++SV+SGY+LA   ++ +      R+    K+W  +WA K+P+KIKFF WR  + +LP    L  R +  +  CP+C RK E+V HA+W C + K
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK

Query:  QHWRESPF--FPR
        ++     F  FPR
Subjt:  QHWRESPF--FPR

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

2.3e-78

44.77

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF++PK L +E N +MARFWW + +  + +HW  W  +C  K +GGLGFRDLE FNQALLAKQ WR++  P+SLV R+ + RY     F+EA  G + 
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        SF+W+SL WG++LL +GLRWRVG+G SI +  D+WL      K++    +     V  L      WNV L+++IF +++V A L+IP       D LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK
        YE NG++SV+SGY+LAC  ++ +      R+    K+W  +WA K+P+KIKFF WR  + +LP    L  R +  +  CP C RK E+V HA+W C + K
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRM---KKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVK

Query:  QHWRES
        + WR S
Subjt:  QHWRES

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

6.8e-83

46.95

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF+LPKRLIRE + + ARFWWG  +  KK+HW +W  + +PKC GG+GFRDLELFN+ALLAKQ WR++  P+S++ RVLKGRYF+  SFMEA   G+ 
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLL-NLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIW
        S++W+S+LWGRDLLK+GLRWR+G+G S+ I GD W+  +P++K++    +   +RV SL+ + +  W  +++++ F  ++   IL IP  R   ED+LIW
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLL-NLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIW

Query:  HYEENGLFSVRSGYKLA-----CSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECS
        +YE+ G++SVRSGYK+A     C    S  SS++ R   WW   W   +P+KIK F WRL    LP   NL KRG++++  C  C R  E   H  W C 
Subjt:  HYEENGLFSVRSGYKLA-----CSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECS

Query:  SVKQHWRESPF
          +  W  S F
Subjt:  SVKQHWRESPF

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

4.7e-76

42.9

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MS F++P  L  +  + MARFWWG ++  K +HWA W R+   K  GG+GFRDL  FNQAL+AKQGWR+++ P SLV RVLK RYF+H  FM AG G   
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        SFVW+S++WGR +L +G RWR+G+G+++ + G+ W+ R  + K I    +  D  V  L++    W  +LI + F+ ED  AI++IP P+R  ED+LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW
        Y++ G +SV+SGY++A  ++     S     +  W F+W   +P K+K F WR  +  LP   NL K+ +     C  C    ETV HA+ EC+  ++ W
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW

Query:  RES
        R S
Subjt:  RES

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAR4 uncharacterized protein LOC111018954

3.3e-83

46.95

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF+LPKRLIRE + + ARFWWG  +  KK+HW +W  + +PKC GG+GFRDLELFN+ALLAKQ WR++  P+S++ RVLKGRYF+  SFMEA   G+ 
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLL-NLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIW
        S++W+S+LWGRDLLK+GLRWR+G+G S+ I GD W+  +P++K++    +   +RV SL+ + +  W  +++++ F  ++   IL IP  R   ED+LIW
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLL-NLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIW

Query:  HYEENGLFSVRSGYKLA-----CSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECS
        +YE+ G++SVRSGYK+A     C    S  SS++ R   WW   W   +P+KIK F WRL    LP   NL KRG++++  C  C R  E   H  W C 
Subjt:  HYEENGLFSVRSGYKLA-----CSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECS

Query:  SVKQHWRESPF
          +  W  S F
Subjt:  SVKQHWRESPF

A0A803PEX7 Uncharacterized protein

1.2e-80

41.35

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF++ K +I E   ++ARFWWG      K+HW +WR++C  K +GG+GFRDLE FNQ++LAKQGW+LI +PD L+ RVLK  YF + +F EA  G  G
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        S VWK +LWGRDLL +G RW VG+G  I +  D WL R+    +  K  I  D  + SL+  +  W +N +   F ++D+  +L I  P     D + W 
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW
           NG +SV SGYKL  +  +    S+  +++ WW F+W   +  K+K F W++F  +LP   +LRKRGMDV   C  CL++EE + HA+W C +V++ W
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW

Query:  RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW
        +    + +    +I +A + LWW W +L  + F  FVG +W
Subjt:  RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW

A0A803PPQ0 Uncharacterized protein

1.8e-81

40.94

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF+LPK+LI+  + + A FWWG+ +  KK+HW +W ++C PK  GGLGFR L  FNQALLAKQGWRLI  P SL+ RVLK  Y+ + SFMEAG     
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        S VWK + WGR +L+EG RWR+G+GR   +  D+W+ R     ++ K  + P  ++  L+N D  W ++ +Q+ F EED+  +  IP     VED L W 
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLR-ESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQH
        Y  NG + V+SGY++   +      SS+   + KWW  LW+  +P ++K F WR+ + +LP   NL  RGMDV++ C  C  + ET+ HA+W C+ VK  
Subjt:  YEENGLFSVRSGYKLACSLR-ESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQH

Query:  WRESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW
        W+  P++ +   F   +  D++     +L    F+E + + W
Subjt:  WRESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW

A0A803PTB0 Uncharacterized protein

1.6e-82

43.97

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        M  F LPK+ I E   + ARFWWG  +  KK HW +W ++C+PK  GGLGF+DLELFN+ALLAKQ WR++  P SLVG+VLK  YF H S ++A KG   
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        S VW+ LLWGR++++ G RWRVG G +I+I+ DRWL R    + I    I    +V  L   +  W+   I+EIF E+D   I+ I +     ED+LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRC--LRKEETVFHAIWECSSVKQ
        + +NG ++VRSGY  A + R    +SD    KKWW  +W+ ++P K+K F W++ + +L   S L  R M+V   C RC   RKEETV HA+WEC   K+
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRC--LRKEETVFHAIWECSSVKQ

Query:  HWRESPFFPRPGPFSIKNAVDL-----LWWCWVNLEGDRFDEFVGLSW
         W+    +       IKN ++L     LW     L G  FD FV +SW
Subjt:  HWRESPFFPRPGPFSIKNAVDL-----LWWCWVNLEGDRFDEFVGLSW

A0A803Q9W0 Uncharacterized protein

1.1e-83

41.64

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        MSCF+LPK LI++ + +MARFWWG  +  +K HW +W+++C PK  GG+GF++LELFNQ+LLAKQGW++I  P S++ RVLK  Y+ + +F+EA  GG G
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH
        S++W+S+LWGR ++ +G+RWRV  GR + I  D+WL R  +  +     +     + ++ + D  WN   I+E F  +DV  IL I        D LIWH
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWH

Query:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW
        Y  +G ++V SGYK+  +  +  G+S+    KKWW  +W  + P K++ F WR+  G+LPV  NLR RGMDV+  C  C ++EET+ H++W C+S K  W
Subjt:  YEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHW

Query:  RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW
        R    +P     S   A+D+L      +  D F  F+ +SW
Subjt:  RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDRFDEFVGLSW

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

5.7e-32

28.45

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAG---KG
        MS   LP+ ++   +Q+   F WG     KK H   W +VC PK  GGLG R  +  N+AL++K GWRL+++ +SL   VL+ +Y   G   ++      
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAG---KG

Query:  GSGSFVWKSLLWG-RDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNL---DNSWNVNLIQEIFKEEDVMAILRIPRPR-RC
        GS S  W+S+  G RD++  G+ W  GDG+ I    DRW+  +P ++ +  G    D       +L      W+   I         + +  +       
Subjt:  GSGSFVWKSLLWG-RDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNL---DNSWNVNLIQEIFKEEDVMAILRIPRPR-RC

Query:  VEDKLIWHYEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWE
          D+L W + ++G FSVRS Y++      +V    +  M  ++  LW  +VP ++K F W +    +       +R +  S  C  C    E++ H + +
Subjt:  VEDKLIWHYEENGLFSVRSGYKLACSLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWE

Query:  CSSVKQHW-RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDR
        C +    W R  P   + G FS      L  W + NL GDR
Subjt:  CSSVKQHW-RESPFFPRPGPFSIKNAVDLLWWCWVNLEGDR

P93295 Uncharacterized mitochondrial protein AtMg00310

3.9e-33

45.71

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPK-CSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGS
        MSCF+L K L ++    M  FWW   E  +K+ W +W+++C  K   GGLGFRDL  FNQALLAKQ +R+I +P +L+ R+L+ RYF H S ME   G  
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPK-CSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGS

Query:  GSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLRE
         S+ W+S++ GR+LL  GL   +GDG    +  DRW++ E
Subjt:  GSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLRE

Arabidopsis top hits

e value

%identity

Alignment

AT3G09510.1 Ribonuclease H-like superfamily protein

1.7e-23

29.91

Show/hide

Query:  LKGRYFRHGSFMEAGKGGSGSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNS---WNVNLIQEIFKE
        +K RYF+  S ++A      S+ W SLL G  LLK+G R  +GDG++I I  D  +   P  + ++      +  + +L     S   W+ + I +   +
Subjt:  LKGRYFRHGSFMEAGKGGSGSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNS---WNVNLIQEIFKE

Query:  EDVMAILRIPRPRRCVEDKLIWHYEENGLFSVRSGYKLAC--------SLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRG
         D   I RI   +    DK+IW+Y   G ++VRSGY L          ++    GS D          +W   +  K+K F WR     L     L  RG
Subjt:  EDVMAILRIPRPRRCVEDKLIWHYEENGLFSVRSGYKLAC--------SLRESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRG

Query:  MDVSVGCPRCLRKEETVFHAIWECSSVKQHWRES
        M +   CPRC R+ E++ HA++ C      WR S
Subjt:  MDVSVGCPRCLRKEETVFHAIWECSSVKQHWRES

AT4G29090.1 Ribonuclease H-like superfamily protein

5.6e-51

31.04

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG
        M+CF LPK + ++   V+A FWW  ++  K +HW +W  +   K  GG+GF+D+E FN ALL KQ WR++ +P+SL+ +V K RYF     + A  G   
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSG

Query:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPD--ARVESLLNLDN-------SWNVNLIQEIFKEEDVMAILRIPRPRR
        SFVWKS+   +++L++G R  VG+G  I I   +WL  +P+   +    + P   A V S+L + +        W  ++I+ +F E +   I  +    R
Subjt:  SFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPD--ARVESLLNLDN-------SWNVNLIQEIFKEEDVMAILRIPRPRR

Query:  CVEDKLIWHYEENGLFSVRSGYKLACSL---RESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFH
         + D   W Y  +G ++V+SGY +   +   R S     +  +   +  +W  +   KI+ F W+     LPV   L  R +     C RC   +ETV H
Subjt:  CVEDKLIWHYEENGLFSVRSGYKLACSL---RESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFH

Query:  AIWECSSVKQHWRESPF-FPRPGPFSIKNAVDLLW
         +++C+  +  W  S    P  G ++    V+L W
Subjt:  AIWECSSVKQHWRESPF-FPRPGPFSIKNAVDLLW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.8e-34

45.71

Show/hide

Query:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPK-CSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGS
        MSCF+L K L ++    M  FWW   E  +K+ W +W+++C  K   GGLGFRDL  FNQALLAKQ +R+I +P +L+ R+L+ RYF H S ME   G  
Subjt:  MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPK-CSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGS

Query:  GSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLRE
         S+ W+S++ GR+LL  GL   +GDG    +  DRW++ E
Subjt:  GSFVWKSLLWGRDLLKEGLRWRVGDGRSINIVGDRWLLRE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCATGTTTTCAGTTGCCGAAGAGGCTAATTCGGGAATGCAATCAAGTTATGGCTAGATTTTGGTGGGGGGAGGAGGAGGGAGTCAAAAAAGTTCACTGGGCTTCATG
GAGGAGGGTGTGTGTTCCTAAATGCAGTGGGGGTCTTGGGTTTAGAGACCTGGAGCTCTTTAACCAGGCTCTCTTGGCGAAACAAGGGTGGAGACTGATTGAGAAGCCGG
ATTCATTGGTGGGGCGGGTGTTGAAGGGGAGATATTTTCGCCATGGTTCCTTTATGGAGGCAGGGAAGGGTGGAAGTGGATCGTTTGTGTGGAAGAGCCTGTTGTGGGGG
AGGGACCTCTTGAAGGAAGGGCTGAGGTGGCGTGTCGGGGATGGTAGATCTATTAATATTGTGGGGGATAGGTGGCTTTTACGAGAGCCTTCTATGAAAGTAATTCACAA
AGGGGGTATTAGCCCTGATGCTAGGGTGGAAAGCCTATTAAATCTGGATAACTCTTGGAATGTGAACCTCATCCAAGAGATATTCAAGGAGGAGGATGTTATGGCTATTC
TCAGGATACCTAGACCAAGGCGGTGTGTGGAAGACAAACTCATATGGCACTACGAGGAAAATGGTTTGTTTTCAGTGAGGAGTGGATACAAGTTGGCCTGTTCATTGAGA
GAAAGTGTAGGCAGTTCTGATCAAGGGAGGATGAAAAAGTGGTGGTACTTTTTGTGGGCAAGGAAAGTTCCTAGCAAGATTAAGTTTTTCTGCTGGAGGTTGTTTTATGG
CTATCTTCCTGTGGTGTCAAATCTCAGGAAGCGTGGGATGGATGTTTCGGTTGGGTGCCCTAGGTGCTTGAGGAAGGAGGAGACAGTGTTCCACGCTATTTGGGAATGTA
GTTCTGTTAAACAGCACTGGCGAGAATCACCTTTTTTCCCAAGACCTGGGCCCTTCTCGATTAAGAATGCTGTGGATCTGTTGTGGTGGTGTTGGGTGAATCTGGAAGGA
GATCGTTTTGATGAGTTTGTGGGGCTTAGTTGGTGGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSCFQLPKRLIRECNQVMARFWWGEEEGVKKVHWASWRRVCVPKCSGGLGFRDLELFNQALLAKQGWRLIEKPDSLVGRVLKGRYFRHGSFMEAGKGGSGSFVWKSLLWG
RDLLKEGLRWRVGDGRSINIVGDRWLLREPSMKVIHKGGISPDARVESLLNLDNSWNVNLIQEIFKEEDVMAILRIPRPRRCVEDKLIWHYEENGLFSVRSGYKLACSLR
ESVGSSDQGRMKKWWYFLWARKVPSKIKFFCWRLFYGYLPVVSNLRKRGMDVSVGCPRCLRKEETVFHAIWECSSVKQHWRESPFFPRPGPFSIKNAVDLLWWCWVNLEG
DRFDEFVGLSWW

Lag0011090 (gene) of Sponge gourd (AG-4) v1 genome