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Lag0011091 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011091
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:14114033..14114581
RNA-Seq ExpressionLag0011091
SyntenyLag0011091
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]2.2e-1635.9Show/hide
Query:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE
        P A L K+N DA   +++  + +G I+RD  G V LT ++L+    DVD +E  A+ + +++  EAG +  ++E+DS R+ +LL ++ VD+SEVGVL   
Subjt:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE

Query:  IR-DLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD
        I+  L+      SFS+  R+ N  AH  A+ A+      +W+EE P  + S L+ D
Subjt:  IR-DLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD

XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]1.0e-1639.49Show/hide
Query:  VAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLV
        VAP   +YKLN DA   ++   S IGAI+R+ KGEVM  +    P V+D +  E +A R A+    +AG   L +E D+A V++ L     D S +G +V
Subjt:  VAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLV

Query:  KEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD
        ++++ LA  L   SFS  +R AN VAH  AR A     + +WLEE P  +   LS D
Subjt:  KEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD

XP_023880084.1 uncharacterized protein LOC111992454 [Quercus suber]1.3e-1638.69Show/hide
Query:  GGQKPAVQRVAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESV
        GG +P      P +  YKLN DA        S +GAI+R+++GEVM  L    PFVQD +  E +A R A+    + G+L L +E D+A V+  + S  +
Subjt:  GGQKPAVQRVAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESV

Query:  DESEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL
        D S +G ++++I  L   L   S S  +RSAN VAH  AR+A   S E VW+E+ P   R  L  D L
Subjt:  DESEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL

XP_023920513.1 uncharacterized protein LOC112032047 [Quercus suber]8.5e-1638.16Show/hide
Query:  YKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKEIRDLA
        YKLN +A       +S +GAI+R+ +GEVM  L    PFVQD +  E +A R A+    + G+  L +E D+  V+  + S  +D S +G ++++I  L 
Subjt:  YKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKEIRDLA

Query:  RELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL
          L  CS S  +RSAN VAH  AR+A   S E VW+E+ P   +  L  D L
Subjt:  RELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL

XP_030963892.1 uncharacterized protein LOC115985062 [Quercus lobata]5.0e-1637.58Show/hide
Query:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE
        P +  YKLN DA        S +GAI+R+++GEVM  L    PFVQD +  E +A R A+    + G+  L +E D+  V+  + S  +D S +G ++++
Subjt:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE

Query:  IRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL
        I  L R L   S S  +RSAN VAH+ +R+A     E VW+E+ P   R  L  D L
Subjt:  IRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGL

TrEMBL top hitse value%identityAlignment
A0A2N9G5T2 Uncharacterized protein6.0e-1536.55Show/hide
Query:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE
        P    +K N D    ++T  + IG IVR++ G+VM +L++ + + Q V+++EA A R A+  VKE GL   E E DS  VV+ L S     +  G L+K+
Subjt:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE

Query:  IRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELP
         + L   L+   F+  +R  N +AHA AR AI      VW+E++P
Subjt:  IRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELP

A0A2N9IQU0 Uncharacterized protein4.6e-1537.14Show/hide
Query:  YKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKEIRDLA
        +K+N D    ++T  + IG IVR++ GEVM TL++ + + Q V+++EA A + A+  V E GL   E E DS  VV+ L S     S+ G L+++ + LA
Subjt:  YKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKEIRDLA

Query:  RELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELP
          L    F+  +   N +AHA AR AI      VW+E++P
Subjt:  RELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELP

A0A5C7IIT4 Uncharacterized protein1.2e-1534.68Show/hide
Query:  QRVAP-----VASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDE
        QRVAP      +  YK+NTDA    + + + IG ++RD  G VM +L +  P +    T+EA+A+     +  EAGL    +ESDS  VV+L+ S  +  
Subjt:  QRVAP-----VASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDE

Query:  SEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGLDSFCPVS
        +E+GV++ +I  +       S S+  R  N VAH+ A+ ++    E VWLE+ PL + S +  D     CP S
Subjt:  SEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGLDSFCPVS

A0A6J1DBJ7 uncharacterized protein LOC1110189731.1e-1635.9Show/hide
Query:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE
        P A L K+N DA   +++  + +G I+RD  G V LT ++L+    DVD +E  A+ + +++  EAG +  ++E+DS R+ +LL ++ VD+SEVGVL   
Subjt:  PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLVKE

Query:  IR-DLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD
        I+  L+      SFS+  R+ N  AH  A+ A+      +W+EE P  + S L+ D
Subjt:  IR-DLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRD

A0A803L9N8 Uncharacterized protein1.0e-1434.34Show/hide
Query:  VAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLV
        + P +S YKLNTDA  S K +   +G +VRD  G+VM+T  K +     +  +EA+A+   M  V +AG   LEV SD  +V+ LL     + S   ++V
Subjt:  VAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDESEVGVLV

Query:  KEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGLDSFCPVS
         +I   A       FS+C R  N VAH+ A  ++  S E  W+E+ P  +   +  D L++  P S
Subjt:  KEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGLDSFCPVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.7e-0426.21Show/hide
Query:  GQKPAVQRVA------PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLL
        G KP V R +      P     K NTDA  +R  +   IG ++R++KGEV     + +P ++ V   E  A+R A++ +       +  ESDS  ++ +L
Subjt:  GQKPAVQRVA------PVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLL

Query:  RSESVDESEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAAR
         ++ +  S +   +++++ L  +     F +  R  N +A   AR
Subjt:  RSESVDESEVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGGGGCCAAAAACCTGCTGTTCAAAGGGTGGCTCCGGTTGCTTCCCTGTACAAACTGAATACGGATGCGGGGACAAGCAGAAAGACCCAAACAAGTAGC
ATAGGTGCTATAGTGAGGGATAAAAAAGGGGAAGTGATGCTTACCTTGCTGAAATTGATTCCGTTTGTCCAAGATGTTGATACCTTGGAAGCAATGGCAATCCGT
GATGCCATGGTGGTTGTGAAGGAAGCAGGCCTGCTGTCGTTGGAGGTGGAGTCGGACTCAGCCCGAGTTGTATCATTGCTCAGGTCAGAGTCGGTGGATGAATCG
GAAGTGGGTGTGTTGGTGAAGGAAATCAGAGATTTGGCGAGAGAGCTGCTTGTTTGTTCGTTTAGCTGGTGTCGGAGGAGTGCGAACGTGGTAGCGCACGCGGCG
GCAAGGTGGGCGATCGAAGAGAGCGTTGAAGGCGTGTGGCTTGAAGAGTTGCCGTTAGGGCTTAGGTCTCGTTTGAGCAGAGATGGTCTCGACAGCTTTTGTCCT
GTGTCGGGTGTTTTGGTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGGGGCCAAAAACCTGCTGTTCAAAGGGTGGCTCCGGTTGCTTCCCTGTACAAACTGAATACGGATGCGGGGACAAGCAGAAAGACCCAAACAAGTAGC
ATAGGTGCTATAGTGAGGGATAAAAAAGGGGAAGTGATGCTTACCTTGCTGAAATTGATTCCGTTTGTCCAAGATGTTGATACCTTGGAAGCAATGGCAATCCGT
GATGCCATGGTGGTTGTGAAGGAAGCAGGCCTGCTGTCGTTGGAGGTGGAGTCGGACTCAGCCCGAGTTGTATCATTGCTCAGGTCAGAGTCGGTGGATGAATCG
GAAGTGGGTGTGTTGGTGAAGGAAATCAGAGATTTGGCGAGAGAGCTGCTTGTTTGTTCGTTTAGCTGGTGTCGGAGGAGTGCGAACGTGGTAGCGCACGCGGCG
GCAAGGTGGGCGATCGAAGAGAGCGTTGAAGGCGTGTGGCTTGAAGAGTTGCCGTTAGGGCTTAGGTCTCGTTTGAGCAGAGATGGTCTCGACAGCTTTTGTCCT
GTGTCGGGTGTTTTGGTTGTGTAA
Protein sequenceShow/hide protein sequence
MGGGQKPAVQRVAPVASLYKLNTDAGTSRKTQTSSIGAIVRDKKGEVMLTLLKLIPFVQDVDTLEAMAIRDAMVVVKEAGLLSLEVESDSARVVSLLRSESVDES
EVGVLVKEIRDLARELLVCSFSWCRRSANVVAHAAARWAIEESVEGVWLEELPLGLRSRLSRDGLDSFCPVSGVLVV