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Lag0011092 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011092
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr1:14152787..14155835
RNA-Seq ExpressionLag0011092
SyntenyLag0011092
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023532393.1 uncharacterized protein LOC111794553 [Cucurbita pepo subsp. pepo]1.4e-0957.14Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKASIDPNSDLSEDT
        ++E M KND VIQS  ASL++LE Q+GQLA ++RNRPLG LP+NTE PKREG  K     D +S  + DT
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKASIDPNSDLSEDT

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]5.4e-0940.87Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLS--KDKASIDPNSDLSEDTSSSRRSFCLAILTPLLVRKKLYPRVASE
        MR+ M KNDAVIQS  ASL++LE Q+GQLA  ++NRP GTLPS+TENP+R+G    K K+    ++ +S     + R + +     +L R  +       
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLS--KDKASIDPNSDLSEDTSSSRRSFCLAILTPLLVRKKLYPRVASE

Query:  IEGEIPFVSDLERNP
            IP V  LE+ P
Subjt:  IEGEIPFVSDLERNP

XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]1.4e-0965.52Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        MR+ MTKNDAVIQS  ASL++LE Q+GQLA  ++NRP GTLPS+TENP+R+G    KA
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]4.2e-0963.79Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        MR+ M KNDAVIQS  ASL++LE Q+GQLA  ++NRP GTLPS+TENP+R+G    KA
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]5.4e-0963.79Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        MR+ M KNDAVIQS  ASL++LE Q+GQLA  ++NRP GTLPS+TENP+R+G    KA
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

TrEMBL top hitse value%identityAlignment
A0A1U8MUI2 uncharacterized protein LOC1079414461.6e-0637.04Show/hide
Query:  MTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA-------SIDPNSDLSEDTSSSRRSFCLAILTPLLVRKKL--YPRV
        M K DA+IQS  A+LK+LESQ+GQLA ++RNRP GTLP NT+NP++ G    K        +++P + + ED    ++     +  P  V  +L  +  V
Subjt:  MTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA-------SIDPNSDLSEDTSSSRRSFCLAILTPLLVRKKL--YPRV

Query:  ASEIEGEI
         S ++ ++
Subjt:  ASEIEGEI

A0A6J1DXH8 uncharacterized protein LOC1110254743.8e-0862.96Show/hide
Query:  MTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        M KN+A +QS T SL++LE Q+GQ+A K++NRPLGTLPS+TE PKREG  + KA
Subjt:  MTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

A0A6J1G7Q6 uncharacterized protein LOC1114515983.8e-0862.26Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGL
        ++E M +NDAVIQS   SL++LE Q+GQLA ++RNRPLG LP++TE PKREG+
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGL

A0A6J1GJ68 uncharacterized protein LOC1114543443.8e-0860.34Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        ++E M KND VIQS  ASL++LE Q+GQLA ++RNRPLG LP++TE PKREG  + +A
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

A0A6J1H7K8 uncharacterized protein LOC1114611675.9e-0962.07Show/hide
Query:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA
        ++E M KND VIQS  ASL++LE Q+GQLA ++RNRPLG LPS+TE PKREG+ + +A
Subjt:  MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAAATGATGACTAAGAATGATGCTGTAATTCAAAGTTTAACAGCTTCCTTAAAGAGTCTAGAATCTCAAATTGGACAGTTGGCTAAGAAAATGAGGAATAGACC
ATTAGGGACCCTACCAAGCAATACAGAAAATCCTAAAAGAGAAGGCCTAAGCAAGGATAAGGCCTCCATTGATCCCAACTCGGATCTATCAGAAGACACTTCGTCCTCGC
GTCGTTCGTTCTGCCTAGCCATCCTCACGCCGTTGCTTGTACGTAAGAAGCTCTATCCTCGCGTCGCCTCTGAAATCGAAGGGGAAATCCCCTTCGTTTCAGATCTGGAA
CGAAACCCAGATCTGGATTACGTTTCAGGCATAGATTTTTGGTCGCGGGAGAGAGAAAGTTTCTCCAGCAGTGATATTAACAACAAAATCCAAGCAAAGAACAGCGAGAT
AGCAAGAAACAGAAGGAAAAACAGAAGCAGAGGAAGTAATTCCAAAATGAAAACCCCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAAATGATGACTAAGAATGATGCTGTAATTCAAAGTTTAACAGCTTCCTTAAAGAGTCTAGAATCTCAAATTGGACAGTTGGCTAAGAAAATGAGGAATAGACC
ATTAGGGACCCTACCAAGCAATACAGAAAATCCTAAAAGAGAAGGCCTAAGCAAGGATAAGGCCTCCATTGATCCCAACTCGGATCTATCAGAAGACACTTCGTCCTCGC
GTCGTTCGTTCTGCCTAGCCATCCTCACGCCGTTGCTTGTACGTAAGAAGCTCTATCCTCGCGTCGCCTCTGAAATCGAAGGGGAAATCCCCTTCGTTTCAGATCTGGAA
CGAAACCCAGATCTGGATTACGTTTCAGGCATAGATTTTTGGTCGCGGGAGAGAGAAAGTTTCTCCAGCAGTGATATTAACAACAAAATCCAAGCAAAGAACAGCGAGAT
AGCAAGAAACAGAAGGAAAAACAGAAGCAGAGGAAGTAATTCCAAAATGAAAACCCCAAATTGA
Protein sequenceShow/hide protein sequence
MREMMTKNDAVIQSLTASLKSLESQIGQLAKKMRNRPLGTLPSNTENPKREGLSKDKASIDPNSDLSEDTSSSRRSFCLAILTPLLVRKKLYPRVASEIEGEIPFVSDLE
RNPDLDYVSGIDFWSRERESFSSSDINNKIQAKNSEIARNRRKNRSRGSNSKMKTPN