| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN65957.1 hypothetical protein VITISV_035610 [Vitis vinifera] | 9.6e-90 | 35.92 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
+W+ + + V+G+FS+SV + G + W+++VYGP + R FW EL N+L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
PP+ + F+WS M E P R+DRFL S +W + F + + R ENMWL P+FK +WW+E GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---LLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLD
KFM KL+ LK ++ WNK FG++I++K+ L I D E++G LS +L +R +++E +LD+S ++EEI+ ++ KLY + ++
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---LLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLD
Query: GLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISL
GL WSPI + + LE F E+EI +AI + +K+P PDG IIN+ TN ++I L+PKK A ++ ++RPISL
Subjt: GLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISL
Query: VTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQS
+T LYKIIAKVL RL+ +L TI ++Q AFV GRQILDA+L+A+E V+++K S +G + K+D EKAY+ VSW FLD V++ KGF +W WI+GCL S
Subjt: VTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQS
Query: TNFSIMMNEKPRGKIIASRGIRQGDSLSP
+F+I++N +G + ASRG+RQGD LSP
Subjt: TNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| CAN79190.1 hypothetical protein VITISV_000232 [Vitis vinifera] | 2.4e-88 | 34.67 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
MW+ + + V+G+FS+SV + G + W+++VYGP + R FW+EL N+L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
PP+ + F+WS M E P R+DRFL S +W + F + D R ENMWL P+FK + WW+E GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLD------------------------------------
KFM KL+ LK ++ WNK FG++I++K+ L I D E++G LS +L +R K EL +
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLD------------------------------------
Query: --SSLLALEPE----------LEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
+ LE E ++EEI+ ++ KLY + ++GL WSPI + + LE FTE+EI +AI + +K+P PDG
Subjt: --SSLLALEPE----------LEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
Query: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
IIN+ TN ++I L+PKK A ++ D+RPISL+T LYKIIAKVLA RL+ VL TI ++Q AFV GRQILDA+L+A+E V+++K S
Subjt: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
Query: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
++G + K+D EKAY+ VSW FLD V++ KGF RW WI+GCL S +F+I++N +G + ASRG+RQGD LSP
Subjt: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| RVW53010.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | 2.4e-88 | 36.12 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
+W+ M + V+G+FS+S+ + G W+++VYGP N R FW EL+D L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKE----------------------YKLD----RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
P+ + ++WS M E P R+DRFL S +W + F + +K R ENMWL+ +FK N +WW E GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKE----------------------YKLD----RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLS
KFM KL+++K ++ WNK FG + KK+ L + D E++G LS +L +R K E LE E +EEI+ ++ KLY + + ++GL
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLS
Query: WSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTP
WSPI+ + + LE FTE+EI++AI + +K+P PDG IIN+ TN ++I L+PKK + R+ DFRPISL+T
Subjt: WSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTP
Query: LYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNF
LYKIIAKVLA RL+ VL TI ++Q AFV GRQILDA+L+A+E V++++ + ++G + K+D EKAY+ +SW FLD VL++KGF RW W++GCL S ++
Subjt: LYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNF
Query: SIMMNEKPRGKIIASRGIRQGDSLSP
++++N +G + ASRG+RQGD LSP
Subjt: SIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| RVW64166.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 3.1e-88 | 36.6 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND------------LTLPPMENGRFSWSRMGERPAASRIDRFLLSKQW
+W+ ++ + V+G+FS+SV S G WI++VYGP + R FW EL D L PP+ N F+WS M E P R+DRFL S +W
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND------------LTLPPMENGRFSWSRMGERPAASRIDRFLLSKQW
Query: VETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGFKFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLN
F + + R ENMWL+ NFK N WW GW G KFM +L+ +K ++ WNK FG + +KK++ LN
Subjt: VETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGFKFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLN
Query: RIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSL------------------------------------------------LALEPELEEEIVGFYSKL
+ D E++G L+ L +R+ K EL + L L + EEI+ ++ KL
Subjt: RIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSL------------------------------------------------LALEPELEEEIVGFYSKL
Query: YTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKN
YT+ + ++GL WSPI E + LE FTE+EI +AI L +K+P PDG IIN+ TN ++I LIPKK
Subjt: YTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKN
Query: ASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRE
+ R+ DFRPISL+T LYKIIAKVL+ RL+ VL TI +Q AFV GRQILDA+L+A+E V +R+ ++G + K+D EKAY+ V W FLD VL+ KGF
Subjt: ASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRE
Query: RWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
RW W+ GCL S +F+I++N +G + ASRG+RQGD LSP
Subjt: RWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| RVX07754.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | 5.1e-91 | 34.91 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
+W+ + V+G+FS++V + + W+TSVYGP R FW EL D L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
PP+ N F+WS M P R+DRFL S +W F + + R ENMWL P FK WW+E T++GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLD-----------------SSLLALEPE-------LEE
KFM KLK +K ++ WN VFG++ ++K+ L + +D E++GNL+ +L ER+ + EL D SL++ E + E
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLD-----------------SSLLALEPE-------LEE
Query: EIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTY
EIV F+ LY+ + + ++G+ W+PI E + WL+R F+E+E+ A+ L K+P PDG +IN+ TN T+
Subjt: EIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTY
Query: ICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDE
I ++PKK ++ D+RPISLVT LYKIIAKVL+ RL++VL TI SQ AFV GRQILDA+L+A+E V++++ S ++G + K+D EKAY+ V W FLD
Subjt: ICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDE
Query: VLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
VL+ KGF ++W W++GCL S++F+I++N +G + ASRG+RQGD LSP
Subjt: VLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438EZ36 LINE-1 retrotransposable element ORF2 protein | 1.1e-88 | 36.12 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
+W+ M + V+G+FS+S+ + G W+++VYGP N R FW EL+D L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKE----------------------YKLD----RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
P+ + ++WS M E P R+DRFL S +W + F + +K R ENMWL+ +FK N +WW E GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKE----------------------YKLD----RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLS
KFM KL+++K ++ WNK FG + KK+ L + D E++G LS +L +R K E LE E +EEI+ ++ KLY + + ++GL
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLS
Query: WSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTP
WSPI+ + + LE FTE+EI++AI + +K+P PDG IIN+ TN ++I L+PKK + R+ DFRPISL+T
Subjt: WSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTP
Query: LYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNF
LYKIIAKVLA RL+ VL TI ++Q AFV GRQILDA+L+A+E V++++ + ++G + K+D EKAY+ +SW FLD VL++KGF RW W++GCL S ++
Subjt: LYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNF
Query: SIMMNEKPRGKIIASRGIRQGDSLSP
++++N +G + ASRG+RQGD LSP
Subjt: SIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| A0A803QEA6 Uncharacterized protein | 1.8e-89 | 35.37 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELNDLTL-------------------------------------------
+W+ + V DS+VG FSISVL + +G+ W + VYGPC+ + R FW EL L+
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELNDLTL-------------------------------------------
Query: --PPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
P +ENG F+WS P SR+DRFL + W F + + R +N WL+ +F E+WWKE+ GW G
Subjt: --PPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---------------------------------LLDS--
KFM+KLK+L+G ++ W+K FG KK A R+ +D E + L +ER K+K E LL++
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---------------------------------LLDS--
Query: -------------SLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGII------------
++ E E+ EE++ F+SKLYT + ++ ++G+ W I ES+ LE F E+E+ + + NK+P PDG
Subjt: -------------SLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGII------------
Query: ---------------INKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
I N T+ICLIPK+ N+ +VKDFRPISL+T +YKIIAK LA RL+ VL TIS +Q+AFV GRQILD++L+A+E+VED +
Subjt: ---------------INKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
Query: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
+KGF+LK+D EKAY++V W FLD VL+ KGF ERW WI+GC+ ST+FSI +N + RGK SRG+RQGD LSP
Subjt: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| A5BSZ3 Reverse transcriptase domain-containing protein | 4.7e-90 | 35.92 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
+W+ + + V+G+FS+SV + G + W+++VYGP + R FW EL N+L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQEL---------------------------------------------NDL
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
PP+ + F+WS M E P R+DRFL S +W + F + + R ENMWL P+FK +WW+E GW G
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYKLD--------------------------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---LLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLD
KFM KL+ LK ++ WNK FG++I++K+ L I D E++G LS +L +R +++E +LD+S ++EEI+ ++ KLY + ++
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSE---LLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLD
Query: GLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISL
GL WSPI + + LE F E+EI +AI + +K+P PDG IIN+ TN ++I L+PKK A ++ ++RPISL
Subjt: GLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI---------------------------IINKRTNGTYICLIPKKKNASRVKDFRPISL
Query: VTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQS
+T LYKIIAKVL RL+ +L TI ++Q AFV GRQILDA+L+A+E V+++K S +G + K+D EKAY+ VSW FLD V++ KGF +W WI+GCL S
Subjt: VTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQS
Query: TNFSIMMNEKPRGKIIASRGIRQGDSLSP
+F+I++N +G + ASRG+RQGD LSP
Subjt: TNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| M5VS59 Reverse transcriptase domain-containing protein (Fragment) | 5.0e-92 | 36.41 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
+W + V DS+VG FS+S+ W++ +YGPC RERN FW+EL D L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYK---------------LD-----------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
P + N F+WS + E R+DRFL+S W + F Y+ LD R ENMWL P+F ++ WW E + GW G+
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYK---------------LD-----------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEER----LKI--------------------------------------
KFM +LK+LK ++ W+KE FG++ + R+ +D E L L+ ER LKI
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEER----LKI--------------------------------------
Query: ------KSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
K E+ D ++ ++ +E E++ F+ LY+ +K V + ++GL+W PI + WLER F +E+ +A+ G +KSP PDG
Subjt: ------KSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
Query: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
I+N TN T+ICLIPKK N+ +V D RPISLVT LYK+I+KVLA RL+EVL TIS SQ AFV RQILDA+LVA+E VE+ + K
Subjt: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
Query: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
+KG + K+D EKAY+ V W F+D+VL KGF +W GWI GCL+S NFSIM+N KPRGK ASRG+RQGD LSP
Subjt: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| M5WPQ5 Reverse transcriptase domain-containing protein | 2.6e-93 | 36.59 | Show/hide |
Query: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
+W + V DS+VG FS+S+ W++ +YGPC RERN FW+EL D L
Subjt: MWEKDVMEVRDSVVGAFSISVLCSFQGQAKGWITSVYGPCNLRERNYFWQELND---------------------------------------------L
Query: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYK---------------LD-----------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
P + N F+WS + E R+DRFL+S W E F Y+ LD R ENMWL P+FK ++ WW E + GW G+
Subjt: TLPPMENGRFSWSRMGERPAASRIDRFLLSKQWVETFKEYK---------------LD-----------RIENMWLEDPNFKGNVEKWWKEQTLKGWAGF
Query: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEER----LKI--------------------------------------
KFM +LK+LK ++ W+KE FG++ + R+ +D E L L+ ER LKI
Subjt: KFMEKLKVLKGCIRRWNKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEER----LKI--------------------------------------
Query: ------KSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
K E+ D ++ ++ +E E++ F+ LY+ +K V + ++GL+W PI + WLER F +E+ +A+ + G +KSP PDG
Subjt: ------KSELLDSSLLALEPELEEEIVGFYSKLYTDDKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-------------
Query: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
I+N TN T+ICLIPKK N+ +V D+RPISLVT LYK+I+KVLA RL+EVL TIS SQ AFV RQILDA+LVA+E VE+ + K
Subjt: --------------IINKRTNGTYICLIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISK
Query: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
+KG + K+D EKAY+ V W F+D+V+ KGF +W GWI GCL+S NFSIM+N KPRGK ASRG+RQGD LSP
Subjt: KKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 5.4e-11 | 26.15 | Show/hide |
Query: KEERLKIKSELLDSSLLALEP-ELEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGII------
K E+ +I + D + +P E++ I +Y LY + +++ LD + + + L R T EI I +L KSP PDG
Subjt: KEERLKIKSELLDSSLLALEP-ELEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGII------
Query: ---------------INKR---TNGTY---ICLIPKK-KNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESV
I K N Y I LIPK ++ ++ ++FRPISL+ KI+ K+LA R+++ + I + Q F+ G Q I + +
Subjt: ---------------INKR---TNGTY---ICLIPKK-KNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESV
Query: EDRKISKKKG-FILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSPL
+ +K K I+ +D EKA++K+ F+ + L G + I+ +I++N + G RQG LSPL
Subjt: EDRKISKKKG-FILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSPL
|
|
| P08548 LINE-1 reverse transcriptase homolog | 4.4e-13 | 25.79 | Show/hide |
Query: NKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEP-ELEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAW
NK + I K +I ++D + NL+ + K + I S + + +P E+++ + +Y KLY+ K++ L+ + +
Subjt: NKEVFGNIIDKKQACLNRIEEVDVFEEQGNLSFQLKEERLKIKSELLDSSLLALEP-ELEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAW
Query: LERRFTEDEIHRAIKNLGNNKSPRPDG---------------IIINKRTN--------GTY----ICLIPKK-KNASRVKDFRPISLVTPLYKIIAKVLA
L R + EI I+NL KSP PDG I++N N T+ I LIPK K+ +R +++RPISL+ KI+ K+L
Subjt: LERRFTEDEIHRAIKNLGNNKSPRPDG---------------IIINKRTN--------GTY----ICLIPKK-KNASRVKDFRPISLVTPLYKIIAKVLA
Query: ERLKEVLLATISNSQAAFVHGRQILDAILVASESVED-RKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPR
R+++ + I + Q F+ G Q I + ++ K+ K IL +D EKA++ + F+ LK G + I+ +I++N
Subjt: ERLKEVLLATISNSQAAFVHGRQILDAILVASESVED-RKISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPR
Query: GKIIASRGIRQGDSLSPL
G RQG LSPL
Subjt: GKIIASRGIRQGDSLSPL
|
|
| P11369 LINE-1 retrotransposable element ORF2 protein | 1.1e-14 | 29.14 | Show/hide |
Query: KIKSELLDSSLLALEP-ELEEEIVGFYSKLYTD-----DKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-----------
KI++E D + +P E++ I FY +LY+ D+ +F LD + + L + EI I +L KSP PDG
Subjt: KIKSELLDSSLLALEP-ELEEEIVGFYSKLYTD-----DKKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGI-----------
Query: ---IINK-----RTNGTY--------ICLIPK-KKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVE-DR
I++K GT I LIPK +K+ +++++FRPISL+ KI+ K+LA R++E + A I Q F+ G Q I + +
Subjt: ---IINK-----RTNGTY--------ICLIPK-KKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVE-DR
Query: KISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
K+ K I+ LD EKA++K+ F+ +VL+ G + + IK +I +N + I G RQG LSP
Subjt: KISKKKGFILKLDLEKAYEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLSP
|
|
| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.1e-16 | 28.08 | Show/hide |
Query: EPE-LEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGIIIN---------------------KR
+PE + + FY L++ D DGL + E K LE T DE+ +A++ + +NKSP DG+ I K+
Subjt: EPE-LEEEIVGFYSKLYTDD----KKVRFTLDGLSWSPIEESNKAWLERRFTEDEIHRAIKNLGNNKSPRPDGIIIN---------------------KR
Query: TNGTYIC------LIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKA
C L+PKK + +K++RP+SL++ YKI+AK ++ RLK VL I Q+ V GR I D + + + + + + L LD EKA
Subjt: TNGTYIC------LIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKA
Query: YEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLS
+++V +L L+ F ++ G++K S + +N + RG+RQG LS
Subjt: YEKVSWVFLDEVLKLKGFRERWGGWIKGCLQSTNFSIMMNEKPRGKIIASRGIRQGDSLS
|
|
| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 7.3e-08 | 26.85 | Show/hide |
Query: LIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVL
LIPK + ++RPI++ + L +++ ++LA+RL+ + + A + G + +L + R+ +K ++ LD+ KA++ VS + L
Subjt: LIPKKKNASRVKDFRPISLVTPLYKIIAKVLAERLKEVLLATISNSQAAFVHGRQILDAILVASESVEDRKISKKKGFILKLDLEKAYEKVSWVFLDEVL
Query: KLKGFRERWGGWIKGCLQSTNFSIMMNE-KPRGKIIASRGIRQGDSLSP
+ G E +I G L + +I + KI RG++QGD LSP
Subjt: KLKGFRERWGGWIKGCLQSTNFSIMMNE-KPRGKIIASRGIRQGDSLSP
|
|
