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Lag0011105 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011105
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:14623605..14628908
RNA-Seq ExpressionLag0011105
SyntenyLag0011105
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.1e-0937.17Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR
        G+ W++RD +G V  A CR    E  +  LEV A+ EGL+A+ +      + I +E DSLE ++L++   QD TEI   + E  ++ K + + S+ HI R
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR

Query:  YLNILAHQNARRS
          N +AH  ARR+
Subjt:  YLNILAHQNARRS

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.3e-0733.87Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR
        G+ W++R   G + LAG R       VK+LE  A++EGL+ L  +     + + +E DS EV +L+N   +DLT+    V E   L  S  + +   + R
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR

Query:  YLNILAHQNARRSSTLMVSDRWVE
          N  AH  A+R+S L  S  WV+
Subjt:  YLNILAHQNARRSSTLMVSDRWVE

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]5.5e-0934.75Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALME-----VPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSI
        G+ W++RD +G V  A CR    E  +  LEV A+ EGL+A+ +     +     + I +E DSLE ++L++   QD TEI   + E  ++ + + + S+
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALME-----VPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSI

Query:  THIRRYLNILAHQNARRS
         HI R  N +AH  ARR+
Subjt:  THIRRYLNILAHQNARRS

XP_030936218.1 uncharacterized protein LOC115961366 [Quercus lobata]3.0e-0730Show/hide
Query:  NGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIR
        +G+  V+RDHQG V  +  +    E   + +E  A    L   +EV     K + +E DSL V+  + G+ + LT +   + E K+L++       +H++
Subjt:  NGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIR

Query:  RYLNILAHQNARRSSTLMVSDRWVEPQLNHFHSVFAREIL
        R  N+LAH  AR ++ +     W+E   +HFH VF  ++L
Subjt:  RYLNILAHQNARRSSTLMVSDRWVEPQLNHFHSVFAREIL

XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]1.6e-0838.94Show/hide
Query:  EVAANGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSL-EVVNLINGDGQDLTEIAPFVRETKELAKSVGVFS
        ++ A GL WV  DH  RV +AG +       V +LE  A+  GL+ L  +  +    I VE D L EV+NL+N D  DL+E++    E K+   ++GV S
Subjt:  EVAANGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSL-EVVNLINGDGQDLTEIAPFVRETKELAKSVGVFS

Query:  ITHIRRYLNILAH
         +H+RRY N+LA+
Subjt:  ITHIRRYLNILAH

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134125.3e-1037.17Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR
        G+ W++RD +G V  A CR    E  +  LEV A+ EGL+A+ +      + I +E DSLE ++L++   QD TEI   + E  ++ K + + S+ HI R
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR

Query:  YLNILAHQNARRS
          N +AH  ARR+
Subjt:  YLNILAHQNARRS

A0A6J1DNV9 uncharacterized protein LOC1110224036.5e-0833.87Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR
        G+ W++R   G + LAG R       VK+LE  A++EGL+ L  +     + + +E DS EV +L+N   +DLT+    V E   L  S  + +   + R
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR

Query:  YLNILAHQNARRSSTLMVSDRWVE
          N  AH  A+R+S L  S  WV+
Subjt:  YLNILAHQNARRSSTLMVSDRWVE

A0A6J1DSV1 uncharacterized protein LOC1110236082.6e-0934.75Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALME-----VPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSI
        G+ W++RD +G V  A CR    E  +  LEV A+ EGL+A+ +     +     + I +E DSLE ++L++   QD TEI   + E  ++ + + + S+
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALME-----VPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSI

Query:  THIRRYLNILAHQNARRS
         HI R  N +AH  ARR+
Subjt:  THIRRYLNILAHQNARRS

A0A7C9DNW7 RNase H domain-containing protein1.9e-0736.94Show/hide
Query:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR
        G+  VVRD QG+ +LA C+GF  +  V  +E  A++ GL+   E  A  R+ IE+E DS  +V  +N   Q     + F+++   L K   V S +H+RR
Subjt:  GLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITHIRR

Query:  YLNILAHQNAR
          N +AH  AR
Subjt:  YLNILAHQNAR

A0A803MUM1 Uncharacterized protein1.7e-0827.73Show/hide
Query:  AANGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITH
        A + +  VVRDH G V  AGC+         ++E KA++ GLK  M+    +R ++E +C+ L  V L+NG G+D + +    +E K +A+        H
Subjt:  AANGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFSITH

Query:  IRRYLNILAHQNARRSSTLMVSDRWVEPQLNHFHSVFAREILEAKGSNLEPKDNT---WSQRINLEPKDHHWIETCSLLNTNLLP---TQYQCSSSSCSK
        + R  N +AH  A  S     +  WV    +    V A E + A+ +   P   +   W   ++L  K    +   S LN NL P   +  Q  S S   
Subjt:  IRRYLNILAHQNARRSSTLMVSDRWVEPQLNHFHSVFAREILEAKGSNLEPKDNT---WSQRINLEPKDHHWIETCSLLNTNLLP---TQYQCSSSSCSK

Query:  LVAQHALAHKLPYPWIPKEVTFKPIPISGVVNQGDISGYKLARTLLIDQTSASSND
             +   +L    IP E T     I   +NQ    G     T  +D +S+ S D
Subjt:  LVAQHALAHKLPYPWIPKEVTFKPIPISGVVNQGDISGYKLARTLLIDQTSASSND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGGATTCAGCTGGAGAAGTTGGACCTAGAAGTTGCTGCTAACGGCCTCGATTGGGTTGTACGCGACCATCAAGGGCGAGTCCGTCTAGCGGGTTGTCGAGGCTT
TTCCGGCGAGTGCGTGGTCAAGGTCCTGGAAGTAAAGGCCTTAATCGAAGGTCTGAAAGCTCTTATGGAAGTTCCTGCAAACCAAAGGAAATTAATTGAAGTGGAGTGTG
ACTCTTTAGAGGTGGTTAATTTAATCAATGGAGATGGGCAAGACCTTACTGAAATTGCCCCTTTTGTGCGCGAGACTAAGGAATTAGCCAAGAGTGTTGGAGTCTTCTCT
ATTACGCACATCAGAAGATATCTGAACATTCTAGCTCATCAAAATGCAAGGAGATCGTCGACTCTGATGGTGTCTGATCGATGGGTTGAGCCTCAACTCAACCACTTCCA
TTCGGTTTTTGCCCGGGAAATACTTGAAGCGAAAGGATCAAACTTGGAGCCAAAGGATAATACTTGGAGCCAAAGGATCAACTTGGAGCCAAAGGATCATCATTGGATTG
AAACTTGCTCCCTACTCAACACAAATTTGCTCCCCACTCAATATCAATGCTCTAGTTCATCATGCTCCAAGCTTGTAGCTCAACATGCTCTAGCGCATAAGCTTCCATAT
CCTTGGATTCCTAAGGAGGTAACTTTCAAACCAATACCTATATCTGGAGTGGTGAATCAAGGGGATATAAGTGGATATAAGCTTGCCAGAACTCTGTTGATTGATCAGAC
TTCTGCCAGTTCTAATGACCAGAAGGTTGAAGGGAATAAAAATCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGGATTCAGCTGGAGAAGTTGGACCTAGAAGTTGCTGCTAACGGCCTCGATTGGGTTGTACGCGACCATCAAGGGCGAGTCCGTCTAGCGGGTTGTCGAGGCTT
TTCCGGCGAGTGCGTGGTCAAGGTCCTGGAAGTAAAGGCCTTAATCGAAGGTCTGAAAGCTCTTATGGAAGTTCCTGCAAACCAAAGGAAATTAATTGAAGTGGAGTGTG
ACTCTTTAGAGGTGGTTAATTTAATCAATGGAGATGGGCAAGACCTTACTGAAATTGCCCCTTTTGTGCGCGAGACTAAGGAATTAGCCAAGAGTGTTGGAGTCTTCTCT
ATTACGCACATCAGAAGATATCTGAACATTCTAGCTCATCAAAATGCAAGGAGATCGTCGACTCTGATGGTGTCTGATCGATGGGTTGAGCCTCAACTCAACCACTTCCA
TTCGGTTTTTGCCCGGGAAATACTTGAAGCGAAAGGATCAAACTTGGAGCCAAAGGATAATACTTGGAGCCAAAGGATCAACTTGGAGCCAAAGGATCATCATTGGATTG
AAACTTGCTCCCTACTCAACACAAATTTGCTCCCCACTCAATATCAATGCTCTAGTTCATCATGCTCCAAGCTTGTAGCTCAACATGCTCTAGCGCATAAGCTTCCATAT
CCTTGGATTCCTAAGGAGGTAACTTTCAAACCAATACCTATATCTGGAGTGGTGAATCAAGGGGATATAAGTGGATATAAGCTTGCCAGAACTCTGTTGATTGATCAGAC
TTCTGCCAGTTCTAATGACCAGAAGGTTGAAGGGAATAAAAATCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
Protein sequenceShow/hide protein sequence
MRGIQLEKLDLEVAANGLDWVVRDHQGRVRLAGCRGFSGECVVKVLEVKALIEGLKALMEVPANQRKLIEVECDSLEVVNLINGDGQDLTEIAPFVRETKELAKSVGVFS
ITHIRRYLNILAHQNARRSSTLMVSDRWVEPQLNHFHSVFAREILEAKGSNLEPKDNTWSQRINLEPKDHHWIETCSLLNTNLLPTQYQCSSSSCSKLVAQHALAHKLPY
PWIPKEVTFKPIPISGVVNQGDISGYKLARTLLIDQTSASSNDQKVEGNKNPHAAEAHRLDLTPYIN